| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is cotS [H]
Identifier: 18311204
GI number: 18311204
Start: 2544187
End: 2545194
Strand: Reverse
Name: cotS [H]
Synonym: CPE2222
Alternate gene names: 18311204
Gene position: 2545194-2544187 (Counterclockwise)
Preceding gene: 18311206
Following gene: 18311203
Centisome position: 83.96
GC content: 27.88
Gene sequence:
>1008_bases ATGGAACATGATTATATAAAGGATAAAATCTTACTTAACTATGGTATAGAAGTCAAAGAAGTAATAAAAGTGAAAAACAC ATATAAAATTATAACCAGTGATGAGGAGTATTGTTTGAAGGTAATAAAGTATCAATATCCTCATTTTTATTTTATAGTTT CTGCTCAAAAGCATCTTATGAAAAATGGCTTTAATTCAATTCCTAAAATATTAGATACTATTGATGGAAAAGATTATGTA AGGCTAGATGATAAATTAGCTTATTTAACTCCTTGGGTAAAATGTAGAGAATGTGATTATAAAAATAAGTGGGATTTAAG CTTAGCAGCGAAAAAGCTTAGTGAACTACATAATAGTAGTGAAGGGTTTGTTATAAATAGAGATCTTAAGCCTAGAATAG CATGGGGTAAGTGGTATAAGATCTTTGAGACAAGGGGAGAAGAAATTCTTGATTTTAAAAAAAGAATATATCAGAAAGCA TATATGTCAGACTTTGATAAGTTATATCTTTCTATTATGGATGAGGAGTTAAAAAGAGTTGAAAGAACACTTTCTCATAT AAAAACTAGTGGATATTTTGACTATATGAAAAAGGAAGTTAAAAAATTAGGCTTTTGTCATCATGATTATGCAAATCATA ATGTGCTTTTATTAGAAAATAATGAAATAAATATAATAGACTTTGATTACTGTATTTTAGATTCTCACTTACATGATTTA AGTAGCCTATGCATTAGAACAATGAAAGAGGGGAGATGGGACTTAAATTTATTTAAATATATAATAGAGAGTTATTCAAA GAATAAAGAAGTAAGAAATGAAGAGTTTCCTATTATAGCTTCTTTTATTGAATTCCCTCAAGCTTATTGGCAACTAGGAC TTCAATATTATTGGGAACAACAGCCTTGGGAAGAAGAACATTTTTTAAAGAAACTAGGTAAATACGAAAAAGATAGAGAG TTTAGACAGAACTTTGTTGATGAATTAAGCAATTTTACTTTGAGGTGA
Upstream 100 bases:
>100_bases ATTATAATTAATAATATTAATAAATAATATAAAATGTGCATGTAACAAGAAGAATTTAAGGAACATATACTAATTAAAAA GTGACAGTAGGAGTAAGTTT
Downstream 100 bases:
>100_bases TTTAAATTTGAGTGAAAAATTAGAATTGTTTTTAAGAGAAAATAATATAGAGGTATTACCTAGAAAAGAAATAGAAAGAG AAAAAAGAGAATTAAGATTT
Product: spore coat protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MEHDYIKDKILLNYGIEVKEVIKVKNTYKIITSDEEYCLKVIKYQYPHFYFIVSAQKHLMKNGFNSIPKILDTIDGKDYV RLDDKLAYLTPWVKCRECDYKNKWDLSLAAKKLSELHNSSEGFVINRDLKPRIAWGKWYKIFETRGEEILDFKKRIYQKA YMSDFDKLYLSIMDEELKRVERTLSHIKTSGYFDYMKKEVKKLGFCHHDYANHNVLLLENNEINIIDFDYCILDSHLHDL SSLCIRTMKEGRWDLNLFKYIIESYSKNKEVRNEEFPIIASFIEFPQAYWQLGLQYYWEQQPWEEEHFLKKLGKYEKDRE FRQNFVDELSNFTLR
Sequences:
>Translated_335_residues MEHDYIKDKILLNYGIEVKEVIKVKNTYKIITSDEEYCLKVIKYQYPHFYFIVSAQKHLMKNGFNSIPKILDTIDGKDYV RLDDKLAYLTPWVKCRECDYKNKWDLSLAAKKLSELHNSSEGFVINRDLKPRIAWGKWYKIFETRGEEILDFKKRIYQKA YMSDFDKLYLSIMDEELKRVERTLSHIKTSGYFDYMKKEVKKLGFCHHDYANHNVLLLENNEINIIDFDYCILDSHLHDL SSLCIRTMKEGRWDLNLFKYIIESYSKNKEVRNEEFPIIASFIEFPQAYWQLGLQYYWEQQPWEEEHFLKKLGKYEKDRE FRQNFVDELSNFTLR >Mature_335_residues MEHDYIKDKILLNYGIEVKEVIKVKNTYKIITSDEEYCLKVIKYQYPHFYFIVSAQKHLMKNGFNSIPKILDTIDGKDYV RLDDKLAYLTPWVKCRECDYKNKWDLSLAAKKLSELHNSSEGFVINRDLKPRIAWGKWYKIFETRGEEILDFKKRIYQKA YMSDFDKLYLSIMDEELKRVERTLSHIKTSGYFDYMKKEVKKLGFCHHDYANHNVLLLENNEINIIDFDYCILDSHLHDL SSLCIRTMKEGRWDLNLFKYIIESYSKNKEVRNEEFPIIASFIEFPQAYWQLGLQYYWEQQPWEEEHFLKKLGKYEKDRE FRQNFVDELSNFTLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Spore wall, spore coat [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CotS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002575 - InterPro: IPR011009 - InterPro: IPR014255 [H]
Pfam domain/function: PF01636 APH [H]
EC number: NA
Molecular weight: Translated: 40631; Mature: 40631
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: PS00109 PROTEIN_KINASE_TYR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHDYIKDKILLNYGIEVKEVIKVKNTYKIITSDEEYCLKVIKYQYPHFYFIVSAQKHLM CCCCHHHHHHHHHCCCCHHHHHHHHCCEEEEECCHHHHHHHHHHCCCEEEEEEHHHHHHH KNGFNSIPKILDTIDGKDYVRLDDKLAYLTPWVKCRECDYKNKWDLSLAAKKLSELHNSS HCCHHHHHHHHHHCCCCCEEEECCCHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCC EGFVINRDLKPRIAWGKWYKIFETRGEEILDFKKRIYQKAYMSDFDKLYLSIMDEELKRV CCEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERTLSHIKTSGYFDYMKKEVKKLGFCHHDYANHNVLLLENNEINIIDFDYCILDSHLHDL HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEECHHHHHHHHHHHH SSLCIRTMKEGRWDLNLFKYIIESYSKNKEVRNEEFPIIASFIEFPQAYWQLGLQYYWEQ HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC QPWEEEHFLKKLGKYEKDREFRQNFVDELSNFTLR CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MEHDYIKDKILLNYGIEVKEVIKVKNTYKIITSDEEYCLKVIKYQYPHFYFIVSAQKHLM CCCCHHHHHHHHHCCCCHHHHHHHHCCEEEEECCHHHHHHHHHHCCCEEEEEEHHHHHHH KNGFNSIPKILDTIDGKDYVRLDDKLAYLTPWVKCRECDYKNKWDLSLAAKKLSELHNSS HCCHHHHHHHHHHCCCCCEEEECCCHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCC EGFVINRDLKPRIAWGKWYKIFETRGEEILDFKKRIYQKAYMSDFDKLYLSIMDEELKRV CCEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERTLSHIKTSGYFDYMKKEVKKLGFCHHDYANHNVLLLENNEINIIDFDYCILDSHLHDL HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEECHHHHHHHHHHHH SSLCIRTMKEGRWDLNLFKYIIESYSKNKEVRNEEFPIIASFIEFPQAYWQLGLQYYWEQ HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC QPWEEEHFLKKLGKYEKDREFRQNFVDELSNFTLR CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7545510; 9387221; 9384377 [H]