Definition | Clostridium perfringens str. 13, complete genome. |
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Accession | NC_003366 |
Length | 3,031,430 |
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The map label for this gene is glcG [C]
Identifier: 18309917
GI number: 18309917
Start: 1133234
End: 1133662
Strand: Direct
Name: glcG [C]
Synonym: CPE0935
Alternate gene names: 18309917
Gene position: 1133234-1133662 (Clockwise)
Preceding gene: 18309916
Following gene: 18309918
Centisome position: 37.38
GC content: 33.8
Gene sequence:
>429_bases ATGAAAAAATTAAATGATGTAAAAGAATTAAGCTTAGAAATAGTTAAAGAAATGGCTAAAGCTGCTGAAGCTAAAGCTTG TGAAATGAATGTTCCAGTTATATTTGCAGCAGTTGATGCTGGTGCTAATTTAATGCTTATGCACAGAATGGAAGATGCAT TTTTAACAAGTATTGATATAGCTATAAACAAAGCTTATACAGCTGCATGTTTAAAGCAAGGAAGTCATGAAATTGCAGAA TGCGTTCAACCAGGACAAAGCCTTTATGGACTTCAATTAACAAATAATTGTAGAATAGTACCATTTGGTGGTGGATTCCC AATTATAGTTGATAGAAAAGTTGTAGGAGCTGTTGGTGTAAGTGGTGGAACAGTTGAAGAAGACATGGCTATAGCACAAG CAGCAGTAGATTGTTTTAACAATAAGTAA
Upstream 100 bases:
>100_bases GAGAAGAAATTAAAAAATATATAAATAGATTATCAGATACTTTATTTGCATTAGCAAGATATTATGAAGAAAAATAATTA ACCTAAAGGAGGAGAAAAAT
Downstream 100 bases:
>100_bases TAAAAAGCTAATAATATTTAACCTATATAATAGATTAAATATTTAAAATATATTTTAATAGATATAAAATGTTTGAAAAT GGAGGAAAATGAAATGAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: ORFY [H]
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MKKLNDVKELSLEIVKEMAKAAEAKACEMNVPVIFAAVDAGANLMLMHRMEDAFLTSIDIAINKAYTAACLKQGSHEIAE CVQPGQSLYGLQLTNNCRIVPFGGGFPIIVDRKVVGAVGVSGGTVEEDMAIAQAAVDCFNNK
Sequences:
>Translated_142_residues MKKLNDVKELSLEIVKEMAKAAEAKACEMNVPVIFAAVDAGANLMLMHRMEDAFLTSIDIAINKAYTAACLKQGSHEIAE CVQPGQSLYGLQLTNNCRIVPFGGGFPIIVDRKVVGAVGVSGGTVEEDMAIAQAAVDCFNNK >Mature_142_residues MKKLNDVKELSLEIVKEMAKAAEAKACEMNVPVIFAAVDAGANLMLMHRMEDAFLTSIDIAINKAYTAACLKQGSHEIAE CVQPGQSLYGLQLTNNCRIVPFGGGFPIIVDRKVVGAVGVSGGTVEEDMAIAQAAVDCFNNK
Specific function: Unknown
COG id: COG3193
COG function: function code R; Uncharacterized protein, possibly involved in utilization of glycolate and propanediol
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glcG family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005624 [H]
Pfam domain/function: PF03928 DUF336 [H]
EC number: NA
Molecular weight: Translated: 15118; Mature: 15118
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLNDVKELSLEIVKEMAKAAEAKACEMNVPVIFAAVDAGANLMLMHRMEDAFLTSIDI CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEHHHHHHHHHHHH AINKAYTAACLKQGSHEIAECVQPGQSLYGLQLTNNCRIVPFGGGFPIIVDRKVVGAVGV HHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCEEECCCEEEEECC SGGTVEEDMAIAQAAVDCFNNK CCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKLNDVKELSLEIVKEMAKAAEAKACEMNVPVIFAAVDAGANLMLMHRMEDAFLTSIDI CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEHHHHHHHHHHHH AINKAYTAACLKQGSHEIAECVQPGQSLYGLQLTNNCRIVPFGGGFPIIVDRKVVGAVGV HHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCEEECCCEEEEECC SGGTVEEDMAIAQAAVDCFNNK CCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA