Definition | Clostridium perfringens str. 13, complete genome. |
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Accession | NC_003366 |
Length | 3,031,430 |
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The map label for this gene is 18309915
Identifier: 18309915
GI number: 18309915
Start: 1132329
End: 1132679
Strand: Direct
Name: 18309915
Synonym: CPE0933
Alternate gene names: NA
Gene position: 1132329-1132679 (Clockwise)
Preceding gene: 18309914
Following gene: 18309916
Centisome position: 37.35
GC content: 28.49
Gene sequence:
>351_bases ATGATTAAGGATTATAATCATCCAAGCATATTTGTATATTGTTCTTTAGGAATAAATGAAGTGGATATAGAAGAAATTCT ATGGGGAATAGAAGAAGAAGGAATCCCTTTCATATTAAAAAATAAAGATTTAAATGATGCTAAGGAACTTGCTAATTTAG CTGCCAATGATTCCAAACTTTCAGTTGGAATAGGAGTTAATAGTAAAGGTGATGTAAGTTTAACTATTAATAAGTTAAAG GAAGAAGAACCTTTATTCTTTATAAACTTAGAAGAAGGAAATACCTGTTTAAGAAGTTTAGGAGCTAATGGAGCAAGATT AGTTAAGGGGATGCCTTTAAAAAATATTTAA
Upstream 100 bases:
>100_bases GTAGTTGCAGGAAGAGGAAATATAAGAGGATGTGAAGGTCCAAGAAATGCAGTTGCAACTGGATTAGTATTAGCCTTTGA CAGAAAGGGTGTCAAGGAAA
Downstream 100 bases:
>100_bases ATTGAAGAGGTGTTTAACATGAATATTTACACTAAAACTGGTGATAAAGGAACAACTTCTCTTTTCGGAGGAAGTAGAGT AGATAAATGTGATTTAAGAG
Product: glycerol dehydratase reactivation factor, small subunit
Products: NA
Alternate protein names: ORFX [H]
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MIKDYNHPSIFVYCSLGINEVDIEEILWGIEEEGIPFILKNKDLNDAKELANLAANDSKLSVGIGVNSKGDVSLTINKLK EEEPLFFINLEEGNTCLRSLGANGARLVKGMPLKNI
Sequences:
>Translated_116_residues MIKDYNHPSIFVYCSLGINEVDIEEILWGIEEEGIPFILKNKDLNDAKELANLAANDSKLSVGIGVNSKGDVSLTINKLK EEEPLFFINLEEGNTCLRSLGANGARLVKGMPLKNI >Mature_116_residues MIKDYNHPSIFVYCSLGINEVDIEEILWGIEEEGIPFILKNKDLNDAKELANLAANDSKLSVGIGVNSKGDVSLTINKLK EEEPLFFINLEEGNTCLRSLGANGARLVKGMPLKNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010254 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12776; Mature: 12776
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKDYNHPSIFVYCSLGINEVDIEEILWGIEEEGIPFILKNKDLNDAKELANLAANDSKL CCCCCCCCEEEEEEECCCCEECHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCEE SVGIGVNSKGDVSLTINKLKEEEPLFFINLEEGNTCLRSLGANGARLVKGMPLKNI EEEECCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHCCCCCCEEEECCCCCCC >Mature Secondary Structure MIKDYNHPSIFVYCSLGINEVDIEEILWGIEEEGIPFILKNKDLNDAKELANLAANDSKL CCCCCCCCEEEEEEECCCCEECHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCEE SVGIGVNSKGDVSLTINKLKEEEPLFFINLEEGNTCLRSLGANGARLVKGMPLKNI EEEECCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA