Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

Click here to switch to the map view.

The map label for this gene is 18309914

Identifier: 18309914

GI number: 18309914

Start: 1130486

End: 1132336

Strand: Direct

Name: 18309914

Synonym: CPE0932

Alternate gene names: NA

Gene position: 1130486-1132336 (Clockwise)

Preceding gene: 18309913

Following gene: 18309915

Centisome position: 37.29

GC content: 33.33

Gene sequence:

>1851_bases
ATGAAAATCATAGCAGGAATTGATATAGGAAACTCTTCTACAGAAACTGCTTTAGGTAAGGTTTATGAAAATAATGTTGA
ATTTCTGTCTAGTGGGATAATTCCCACTACAGGAATCAAAGGAACGGAAGAAAATATAAGTGGGGTAATAGCTTCTTTAA
ACCAAGCTTTAAAGAAAGCTAACTTAACTTTAGAAGATTTAGATTTAGTTAGAATTAACGAAGCAGCACCTGTTATAGGG
GATGTTGCTATGGAGACAATAACTGAAACAATAATAACTGAATCAACAATGATAGGACATAACCCTTCTACTCCAGGAGG
ATTAGGTGTAGGAATAGGTAAAACTATAAGATTAGAAACTTTAGAAACTTTAAATATTGATGAAATCAAAGAGGAAGATA
ATGCTTTTATTCCATTGGTTTTAGGAAATATAAGTTTTTTAGAGGCTGTATTTATAATAAATCAAGCAACTAGAAGAGGT
ATTAATATAACTGCTGCCATTGTTCAAAAGGATGATGGAGTATTAATCAATAACAGATTAGATAAAAAAATACCTATAGT
TGATGAAGTTTCTCTCTTAGAAAAGGTTCCTGTAGATATGAAAGCAGCTGTTGAAGTAGCACCACAAGGTTCAGTAATAA
GACAGCTATCAAATCCATATGGAATAGCTACTGTTTTTGATTTAAGTCCAGAAGAGACAAAAATGATTGTTCCTGTATCA
AGAGCTTTAATAGGAAATAGATCAGCTGTTGTAATAAAAACTCCTCAAGGGGATGTTAAGGAAAAGAAAATACCAGCTGG
TAAGATTAATATAACAGGAATGAGAAGAAAAGAGTCTGTGGATGTTGAAGAGGGAGCAGATAAAATAATGGAGGCTGTTA
GCCTTTGTTCTCCAATAGAAGATTTAAGAGGAGATGCTGGTTCTAATGTTGGAGGAATGCTTGAAAAAGTTAGACAAGTT
ATGGCTGATTTAACTAATCAAAGCATTTCAGATATAAAGATTCAGGATTTATTAGCAGTAGATACTTTTATCCCTCAAAA
GGTTAAGGGTGGACTTGCAAAAGAGTTTTCAATGGAGAATGCTGTTGGAATAGCAGCAATGGTTAAAGCTCATAAACTTC
AAATGCAAATAATAGCTAATAAACTTGAAGAAAAGTTAGGTGTTCCAGTGGAAGTTGGTGGAGTAGAAGCTGACATGGCA
ATAAGAGGAGCCTTAACAACTCCAGGTACAAATACTCCTTTAGCTATTTTAGATATGGGAGCTGGATCTACAGATGCTTC
TATTATAAATAAAGAAGGTAAAATAACATCAATACATTTAGCTGGTGCAGGAAACATGGTAACTATGCTTATTAAATCAG
AATTAGGTATAGAAGACTTTGGACTTGCAGAGGATATAAAGAAATATCCTTTAGCTAAGGTTGAGAGTTTGTTCCATATA
AGACATGAAGATGGAACTGTAGAGTTCTTTGAAAAACCTTTAGATTCTTCAGTTTTTGCTAAGATTGTAATTATTAAAGA
GGGAATGCTTATTCCGGTAGATGGACAGAATTCTTTAGAAAAGATTAAAAATGTTAGAAAAACTGCTAAGGAAAGAGTTT
TTGTAATTAACTGTTTAAGAGCCTTAAAAAGTGTTTCACCTACAGGAAATATAAGAGATATAGAATTCGTTGTTTTAGTT
GGAGGATCATCATTAGACTTTGAGGTTCCTGAATTAGTAACAGATGCTTTATCTCATTATGGAGTAGTTGCAGGAAGAGG
AAATATAAGAGGATGTGAAGGTCCAAGAAATGCAGTTGCAACTGGATTAGTATTAGCCTTTGACAGAAAGGGTGTCAAGG
AAAATGATTAA

Upstream 100 bases:

>100_bases
TATGATGCTAAAGTTAATGCTGATTTTGTTAGAGAAGCAGCTGAAGTATATGAAACTAGAAATAAATTAAGAATAGAAGA
GTAAAATCAGAGGTGAAAAG

Downstream 100 bases:

>100_bases
GGATTATAATCATCCAAGCATATTTGTATATTGTTCTTTAGGAATAAATGAAGTGGATATAGAAGAAATTCTATGGGGAA
TAGAAGAAGAAGGAATCCCT

Product: glycerol dehydratase reactivation factor, large subunit

Products: NA

Alternate protein names: Diol/Glycerol Dehydratase Reactivating Factor Large Subunit; Glycerol Dehydratase Reactivation Factor; Propanediol Utilization Diol Dehydratase Reactivation PduG; Propanediol Dehydratase Reactivation Protein PduG; Propanediol Utilization ATPase; Diol Dehydratase Reactivation Protein; PduG Protein; Propanediol Dehydratase Reactivation Factor Large Subunit; Propanediol UtilizationDioldehydratase Reactivation

Number of amino acids: Translated: 616; Mature: 616

Protein sequence:

>616_residues
MKIIAGIDIGNSSTETALGKVYENNVEFLSSGIIPTTGIKGTEENISGVIASLNQALKKANLTLEDLDLVRINEAAPVIG
DVAMETITETIITESTMIGHNPSTPGGLGVGIGKTIRLETLETLNIDEIKEEDNAFIPLVLGNISFLEAVFIINQATRRG
INITAAIVQKDDGVLINNRLDKKIPIVDEVSLLEKVPVDMKAAVEVAPQGSVIRQLSNPYGIATVFDLSPEETKMIVPVS
RALIGNRSAVVIKTPQGDVKEKKIPAGKINITGMRRKESVDVEEGADKIMEAVSLCSPIEDLRGDAGSNVGGMLEKVRQV
MADLTNQSISDIKIQDLLAVDTFIPQKVKGGLAKEFSMENAVGIAAMVKAHKLQMQIIANKLEEKLGVPVEVGGVEADMA
IRGALTTPGTNTPLAILDMGAGSTDASIINKEGKITSIHLAGAGNMVTMLIKSELGIEDFGLAEDIKKYPLAKVESLFHI
RHEDGTVEFFEKPLDSSVFAKIVIIKEGMLIPVDGQNSLEKIKNVRKTAKERVFVINCLRALKSVSPTGNIRDIEFVVLV
GGSSLDFEVPELVTDALSHYGVVAGRGNIRGCEGPRNAVATGLVLAFDRKGVKEND

Sequences:

>Translated_616_residues
MKIIAGIDIGNSSTETALGKVYENNVEFLSSGIIPTTGIKGTEENISGVIASLNQALKKANLTLEDLDLVRINEAAPVIG
DVAMETITETIITESTMIGHNPSTPGGLGVGIGKTIRLETLETLNIDEIKEEDNAFIPLVLGNISFLEAVFIINQATRRG
INITAAIVQKDDGVLINNRLDKKIPIVDEVSLLEKVPVDMKAAVEVAPQGSVIRQLSNPYGIATVFDLSPEETKMIVPVS
RALIGNRSAVVIKTPQGDVKEKKIPAGKINITGMRRKESVDVEEGADKIMEAVSLCSPIEDLRGDAGSNVGGMLEKVRQV
MADLTNQSISDIKIQDLLAVDTFIPQKVKGGLAKEFSMENAVGIAAMVKAHKLQMQIIANKLEEKLGVPVEVGGVEADMA
IRGALTTPGTNTPLAILDMGAGSTDASIINKEGKITSIHLAGAGNMVTMLIKSELGIEDFGLAEDIKKYPLAKVESLFHI
RHEDGTVEFFEKPLDSSVFAKIVIIKEGMLIPVDGQNSLEKIKNVRKTAKERVFVINCLRALKSVSPTGNIRDIEFVVLV
GGSSLDFEVPELVTDALSHYGVVAGRGNIRGCEGPRNAVATGLVLAFDRKGVKEND
>Mature_616_residues
MKIIAGIDIGNSSTETALGKVYENNVEFLSSGIIPTTGIKGTEENISGVIASLNQALKKANLTLEDLDLVRINEAAPVIG
DVAMETITETIITESTMIGHNPSTPGGLGVGIGKTIRLETLETLNIDEIKEEDNAFIPLVLGNISFLEAVFIINQATRRG
INITAAIVQKDDGVLINNRLDKKIPIVDEVSLLEKVPVDMKAAVEVAPQGSVIRQLSNPYGIATVFDLSPEETKMIVPVS
RALIGNRSAVVIKTPQGDVKEKKIPAGKINITGMRRKESVDVEEGADKIMEAVSLCSPIEDLRGDAGSNVGGMLEKVRQV
MADLTNQSISDIKIQDLLAVDTFIPQKVKGGLAKEFSMENAVGIAAMVKAHKLQMQIIANKLEEKLGVPVEVGGVEADMA
IRGALTTPGTNTPLAILDMGAGSTDASIINKEGKITSIHLAGAGNMVTMLIKSELGIEDFGLAEDIKKYPLAKVESLFHI
RHEDGTVEFFEKPLDSSVFAKIVIIKEGMLIPVDGQNSLEKIKNVRKTAKERVFVINCLRALKSVSPTGNIRDIEFVVLV
GGSSLDFEVPELVTDALSHYGVVAGRGNIRGCEGPRNAVATGLVLAFDRKGVKEND

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65863; Mature: 65863

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIAGIDIGNSSTETALGKVYENNVEFLSSGIIPTTGIKGTEENISGVIASLNQALKKA
CEEEEEEECCCCCCHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
NLTLEDLDLVRINEAAPVIGDVAMETITETIITESTMIGHNPSTPGGLGVGIGKTIRLET
CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEECCCCEEEEEE
LETLNIDEIKEEDNAFIPLVLGNISFLEAVFIINQATRRGINITAAIVQKDDGVLINNRL
ECCCCHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEECCC
DKKIPIVDEVSLLEKVPVDMKAAVEVAPQGSVIRQLSNPYGIATVFDLSPEETKMIVPVS
CCCCCCHHHHHHHHHCCCCHHHHEEECCCCHHHHHHCCCCCEEEEEECCCCCCEEEEEEH
RALIGNRSAVVIKTPQGDVKEKKIPAGKINITGMRRKESVDVEEGADKIMEAVSLCSPIE
HHHHCCCCEEEEECCCCCCHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCHH
DLRGDAGSNVGGMLEKVRQVMADLTNQSISDIKIQDLLAVDTFIPQKVKGGLAKEFSMEN
HHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCHHHCCCHHHHHCCCH
AVGIAAMVKAHKLQMQIIANKLEEKLGVPVEVGGVEADMAIRGALTTPGTNTPLAILDMG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEECEEEEEEECCCCCCCCEEEEECC
AGSTDASIINKEGKITSIHLAGAGNMVTMLIKSELGIEDFGLAEDIKKYPLAKVESLFHI
CCCCCHHHCCCCCCEEEEEEECCCCEEEEEEHHHCCCCCCCCHHHHHHCCHHHHHHHHEE
RHEDGTVEFFEKPLDSSVFAKIVIIKEGMLIPVDGQNSLEKIKNVRKTAKERVFVINCLR
ECCCCCHHHHHCCCCCCHHEEEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
ALKSVSPTGNIRDIEFVVLVGGSSLDFEVPELVTDALSHYGVVAGRGNIRGCEGPRNAVA
HHHCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHCEEEECCCCCCCCCCCHHHHH
TGLVLAFDRKGVKEND
HHEEEEECCCCCCCCC
>Mature Secondary Structure
MKIIAGIDIGNSSTETALGKVYENNVEFLSSGIIPTTGIKGTEENISGVIASLNQALKKA
CEEEEEEECCCCCCHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
NLTLEDLDLVRINEAAPVIGDVAMETITETIITESTMIGHNPSTPGGLGVGIGKTIRLET
CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEECCCCEEEEEE
LETLNIDEIKEEDNAFIPLVLGNISFLEAVFIINQATRRGINITAAIVQKDDGVLINNRL
ECCCCHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEECCC
DKKIPIVDEVSLLEKVPVDMKAAVEVAPQGSVIRQLSNPYGIATVFDLSPEETKMIVPVS
CCCCCCHHHHHHHHHCCCCHHHHEEECCCCHHHHHHCCCCCEEEEEECCCCCCEEEEEEH
RALIGNRSAVVIKTPQGDVKEKKIPAGKINITGMRRKESVDVEEGADKIMEAVSLCSPIE
HHHHCCCCEEEEECCCCCCHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCHH
DLRGDAGSNVGGMLEKVRQVMADLTNQSISDIKIQDLLAVDTFIPQKVKGGLAKEFSMEN
HHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCHHHCCCHHHHHCCCH
AVGIAAMVKAHKLQMQIIANKLEEKLGVPVEVGGVEADMAIRGALTTPGTNTPLAILDMG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEECEEEEEEECCCCCCCCEEEEECC
AGSTDASIINKEGKITSIHLAGAGNMVTMLIKSELGIEDFGLAEDIKKYPLAKVESLFHI
CCCCCHHHCCCCCCEEEEEEECCCCEEEEEEHHHCCCCCCCCHHHHHHCCHHHHHHHHEE
RHEDGTVEFFEKPLDSSVFAKIVIIKEGMLIPVDGQNSLEKIKNVRKTAKERVFVINCLR
ECCCCCHHHHHCCCCCCHHEEEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
ALKSVSPTGNIRDIEFVVLVGGSSLDFEVPELVTDALSHYGVVAGRGNIRGCEGPRNAVA
HHHCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHCEEEECCCCCCCCCCCHHHHH
TGLVLAFDRKGVKEND
HHEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA