Definition | Clostridium perfringens str. 13, complete genome. |
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Accession | NC_003366 |
Length | 3,031,430 |
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The map label for this gene is 18309914
Identifier: 18309914
GI number: 18309914
Start: 1130486
End: 1132336
Strand: Direct
Name: 18309914
Synonym: CPE0932
Alternate gene names: NA
Gene position: 1130486-1132336 (Clockwise)
Preceding gene: 18309913
Following gene: 18309915
Centisome position: 37.29
GC content: 33.33
Gene sequence:
>1851_bases ATGAAAATCATAGCAGGAATTGATATAGGAAACTCTTCTACAGAAACTGCTTTAGGTAAGGTTTATGAAAATAATGTTGA ATTTCTGTCTAGTGGGATAATTCCCACTACAGGAATCAAAGGAACGGAAGAAAATATAAGTGGGGTAATAGCTTCTTTAA ACCAAGCTTTAAAGAAAGCTAACTTAACTTTAGAAGATTTAGATTTAGTTAGAATTAACGAAGCAGCACCTGTTATAGGG GATGTTGCTATGGAGACAATAACTGAAACAATAATAACTGAATCAACAATGATAGGACATAACCCTTCTACTCCAGGAGG ATTAGGTGTAGGAATAGGTAAAACTATAAGATTAGAAACTTTAGAAACTTTAAATATTGATGAAATCAAAGAGGAAGATA ATGCTTTTATTCCATTGGTTTTAGGAAATATAAGTTTTTTAGAGGCTGTATTTATAATAAATCAAGCAACTAGAAGAGGT ATTAATATAACTGCTGCCATTGTTCAAAAGGATGATGGAGTATTAATCAATAACAGATTAGATAAAAAAATACCTATAGT TGATGAAGTTTCTCTCTTAGAAAAGGTTCCTGTAGATATGAAAGCAGCTGTTGAAGTAGCACCACAAGGTTCAGTAATAA GACAGCTATCAAATCCATATGGAATAGCTACTGTTTTTGATTTAAGTCCAGAAGAGACAAAAATGATTGTTCCTGTATCA AGAGCTTTAATAGGAAATAGATCAGCTGTTGTAATAAAAACTCCTCAAGGGGATGTTAAGGAAAAGAAAATACCAGCTGG TAAGATTAATATAACAGGAATGAGAAGAAAAGAGTCTGTGGATGTTGAAGAGGGAGCAGATAAAATAATGGAGGCTGTTA GCCTTTGTTCTCCAATAGAAGATTTAAGAGGAGATGCTGGTTCTAATGTTGGAGGAATGCTTGAAAAAGTTAGACAAGTT ATGGCTGATTTAACTAATCAAAGCATTTCAGATATAAAGATTCAGGATTTATTAGCAGTAGATACTTTTATCCCTCAAAA GGTTAAGGGTGGACTTGCAAAAGAGTTTTCAATGGAGAATGCTGTTGGAATAGCAGCAATGGTTAAAGCTCATAAACTTC AAATGCAAATAATAGCTAATAAACTTGAAGAAAAGTTAGGTGTTCCAGTGGAAGTTGGTGGAGTAGAAGCTGACATGGCA ATAAGAGGAGCCTTAACAACTCCAGGTACAAATACTCCTTTAGCTATTTTAGATATGGGAGCTGGATCTACAGATGCTTC TATTATAAATAAAGAAGGTAAAATAACATCAATACATTTAGCTGGTGCAGGAAACATGGTAACTATGCTTATTAAATCAG AATTAGGTATAGAAGACTTTGGACTTGCAGAGGATATAAAGAAATATCCTTTAGCTAAGGTTGAGAGTTTGTTCCATATA AGACATGAAGATGGAACTGTAGAGTTCTTTGAAAAACCTTTAGATTCTTCAGTTTTTGCTAAGATTGTAATTATTAAAGA GGGAATGCTTATTCCGGTAGATGGACAGAATTCTTTAGAAAAGATTAAAAATGTTAGAAAAACTGCTAAGGAAAGAGTTT TTGTAATTAACTGTTTAAGAGCCTTAAAAAGTGTTTCACCTACAGGAAATATAAGAGATATAGAATTCGTTGTTTTAGTT GGAGGATCATCATTAGACTTTGAGGTTCCTGAATTAGTAACAGATGCTTTATCTCATTATGGAGTAGTTGCAGGAAGAGG AAATATAAGAGGATGTGAAGGTCCAAGAAATGCAGTTGCAACTGGATTAGTATTAGCCTTTGACAGAAAGGGTGTCAAGG AAAATGATTAA
Upstream 100 bases:
>100_bases TATGATGCTAAAGTTAATGCTGATTTTGTTAGAGAAGCAGCTGAAGTATATGAAACTAGAAATAAATTAAGAATAGAAGA GTAAAATCAGAGGTGAAAAG
Downstream 100 bases:
>100_bases GGATTATAATCATCCAAGCATATTTGTATATTGTTCTTTAGGAATAAATGAAGTGGATATAGAAGAAATTCTATGGGGAA TAGAAGAAGAAGGAATCCCT
Product: glycerol dehydratase reactivation factor, large subunit
Products: NA
Alternate protein names: Diol/Glycerol Dehydratase Reactivating Factor Large Subunit; Glycerol Dehydratase Reactivation Factor; Propanediol Utilization Diol Dehydratase Reactivation PduG; Propanediol Dehydratase Reactivation Protein PduG; Propanediol Utilization ATPase; Diol Dehydratase Reactivation Protein; PduG Protein; Propanediol Dehydratase Reactivation Factor Large Subunit; Propanediol UtilizationDioldehydratase Reactivation
Number of amino acids: Translated: 616; Mature: 616
Protein sequence:
>616_residues MKIIAGIDIGNSSTETALGKVYENNVEFLSSGIIPTTGIKGTEENISGVIASLNQALKKANLTLEDLDLVRINEAAPVIG DVAMETITETIITESTMIGHNPSTPGGLGVGIGKTIRLETLETLNIDEIKEEDNAFIPLVLGNISFLEAVFIINQATRRG INITAAIVQKDDGVLINNRLDKKIPIVDEVSLLEKVPVDMKAAVEVAPQGSVIRQLSNPYGIATVFDLSPEETKMIVPVS RALIGNRSAVVIKTPQGDVKEKKIPAGKINITGMRRKESVDVEEGADKIMEAVSLCSPIEDLRGDAGSNVGGMLEKVRQV MADLTNQSISDIKIQDLLAVDTFIPQKVKGGLAKEFSMENAVGIAAMVKAHKLQMQIIANKLEEKLGVPVEVGGVEADMA IRGALTTPGTNTPLAILDMGAGSTDASIINKEGKITSIHLAGAGNMVTMLIKSELGIEDFGLAEDIKKYPLAKVESLFHI RHEDGTVEFFEKPLDSSVFAKIVIIKEGMLIPVDGQNSLEKIKNVRKTAKERVFVINCLRALKSVSPTGNIRDIEFVVLV GGSSLDFEVPELVTDALSHYGVVAGRGNIRGCEGPRNAVATGLVLAFDRKGVKEND
Sequences:
>Translated_616_residues MKIIAGIDIGNSSTETALGKVYENNVEFLSSGIIPTTGIKGTEENISGVIASLNQALKKANLTLEDLDLVRINEAAPVIG DVAMETITETIITESTMIGHNPSTPGGLGVGIGKTIRLETLETLNIDEIKEEDNAFIPLVLGNISFLEAVFIINQATRRG INITAAIVQKDDGVLINNRLDKKIPIVDEVSLLEKVPVDMKAAVEVAPQGSVIRQLSNPYGIATVFDLSPEETKMIVPVS RALIGNRSAVVIKTPQGDVKEKKIPAGKINITGMRRKESVDVEEGADKIMEAVSLCSPIEDLRGDAGSNVGGMLEKVRQV MADLTNQSISDIKIQDLLAVDTFIPQKVKGGLAKEFSMENAVGIAAMVKAHKLQMQIIANKLEEKLGVPVEVGGVEADMA IRGALTTPGTNTPLAILDMGAGSTDASIINKEGKITSIHLAGAGNMVTMLIKSELGIEDFGLAEDIKKYPLAKVESLFHI RHEDGTVEFFEKPLDSSVFAKIVIIKEGMLIPVDGQNSLEKIKNVRKTAKERVFVINCLRALKSVSPTGNIRDIEFVVLV GGSSLDFEVPELVTDALSHYGVVAGRGNIRGCEGPRNAVATGLVLAFDRKGVKEND >Mature_616_residues MKIIAGIDIGNSSTETALGKVYENNVEFLSSGIIPTTGIKGTEENISGVIASLNQALKKANLTLEDLDLVRINEAAPVIG DVAMETITETIITESTMIGHNPSTPGGLGVGIGKTIRLETLETLNIDEIKEEDNAFIPLVLGNISFLEAVFIINQATRRG INITAAIVQKDDGVLINNRLDKKIPIVDEVSLLEKVPVDMKAAVEVAPQGSVIRQLSNPYGIATVFDLSPEETKMIVPVS RALIGNRSAVVIKTPQGDVKEKKIPAGKINITGMRRKESVDVEEGADKIMEAVSLCSPIEDLRGDAGSNVGGMLEKVRQV MADLTNQSISDIKIQDLLAVDTFIPQKVKGGLAKEFSMENAVGIAAMVKAHKLQMQIIANKLEEKLGVPVEVGGVEADMA IRGALTTPGTNTPLAILDMGAGSTDASIINKEGKITSIHLAGAGNMVTMLIKSELGIEDFGLAEDIKKYPLAKVESLFHI RHEDGTVEFFEKPLDSSVFAKIVIIKEGMLIPVDGQNSLEKIKNVRKTAKERVFVINCLRALKSVSPTGNIRDIEFVVLV GGSSLDFEVPELVTDALSHYGVVAGRGNIRGCEGPRNAVATGLVLAFDRKGVKEND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65863; Mature: 65863
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIIAGIDIGNSSTETALGKVYENNVEFLSSGIIPTTGIKGTEENISGVIASLNQALKKA CEEEEEEECCCCCCHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH NLTLEDLDLVRINEAAPVIGDVAMETITETIITESTMIGHNPSTPGGLGVGIGKTIRLET CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEECCCCEEEEEE LETLNIDEIKEEDNAFIPLVLGNISFLEAVFIINQATRRGINITAAIVQKDDGVLINNRL ECCCCHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEECCC DKKIPIVDEVSLLEKVPVDMKAAVEVAPQGSVIRQLSNPYGIATVFDLSPEETKMIVPVS CCCCCCHHHHHHHHHCCCCHHHHEEECCCCHHHHHHCCCCCEEEEEECCCCCCEEEEEEH RALIGNRSAVVIKTPQGDVKEKKIPAGKINITGMRRKESVDVEEGADKIMEAVSLCSPIE HHHHCCCCEEEEECCCCCCHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCHH DLRGDAGSNVGGMLEKVRQVMADLTNQSISDIKIQDLLAVDTFIPQKVKGGLAKEFSMEN HHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCHHHCCCHHHHHCCCH AVGIAAMVKAHKLQMQIIANKLEEKLGVPVEVGGVEADMAIRGALTTPGTNTPLAILDMG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEECEEEEEEECCCCCCCCEEEEECC AGSTDASIINKEGKITSIHLAGAGNMVTMLIKSELGIEDFGLAEDIKKYPLAKVESLFHI CCCCCHHHCCCCCCEEEEEEECCCCEEEEEEHHHCCCCCCCCHHHHHHCCHHHHHHHHEE RHEDGTVEFFEKPLDSSVFAKIVIIKEGMLIPVDGQNSLEKIKNVRKTAKERVFVINCLR ECCCCCHHHHHCCCCCCHHEEEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH ALKSVSPTGNIRDIEFVVLVGGSSLDFEVPELVTDALSHYGVVAGRGNIRGCEGPRNAVA HHHCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHCEEEECCCCCCCCCCCHHHHH TGLVLAFDRKGVKEND HHEEEEECCCCCCCCC >Mature Secondary Structure MKIIAGIDIGNSSTETALGKVYENNVEFLSSGIIPTTGIKGTEENISGVIASLNQALKKA CEEEEEEECCCCCCHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH NLTLEDLDLVRINEAAPVIGDVAMETITETIITESTMIGHNPSTPGGLGVGIGKTIRLET CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEECCCCEEEEEE LETLNIDEIKEEDNAFIPLVLGNISFLEAVFIINQATRRGINITAAIVQKDDGVLINNRL ECCCCHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEECCC DKKIPIVDEVSLLEKVPVDMKAAVEVAPQGSVIRQLSNPYGIATVFDLSPEETKMIVPVS CCCCCCHHHHHHHHHCCCCHHHHEEECCCCHHHHHHCCCCCEEEEEECCCCCCEEEEEEH RALIGNRSAVVIKTPQGDVKEKKIPAGKINITGMRRKESVDVEEGADKIMEAVSLCSPIE HHHHCCCCEEEEECCCCCCHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCHH DLRGDAGSNVGGMLEKVRQVMADLTNQSISDIKIQDLLAVDTFIPQKVKGGLAKEFSMEN HHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCHHHCCCHHHHHCCCH AVGIAAMVKAHKLQMQIIANKLEEKLGVPVEVGGVEADMAIRGALTTPGTNTPLAILDMG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEECEEEEEEECCCCCCCCEEEEECC AGSTDASIINKEGKITSIHLAGAGNMVTMLIKSELGIEDFGLAEDIKKYPLAKVESLFHI CCCCCHHHCCCCCCEEEEEEECCCCEEEEEEHHHCCCCCCCCHHHHHHCCHHHHHHHHEE RHEDGTVEFFEKPLDSSVFAKIVIIKEGMLIPVDGQNSLEKIKNVRKTAKERVFVINCLR ECCCCCHHHHHCCCCCCHHEEEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH ALKSVSPTGNIRDIEFVVLVGGSSLDFEVPELVTDALSHYGVVAGRGNIRGCEGPRNAVA HHHCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHCEEEECCCCCCCCCCCHHHHH TGLVLAFDRKGVKEND HHEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA