Click here to switch to the map view.

The map label for this gene is 17548031

Identifier: 17548031

GI number: 17548031

Start: 3575264

End: 3576406

Strand: Reverse

Name: 17548031

Synonym: RSc3314

Alternate gene names: NA

Gene position: 3576406-3575264 (Counterclockwise)

Preceding gene: 17548033

Following gene: 17548030

Centisome position: 96.23

GC content: 71.57

Gene sequence:

>1143_bases
ATGCGCGGGCATGCCGTGCGCGGGAGCGCGCAGTTGTCGGCCGCAGCCGGCGTTTTTGTTACGTTGATGGTGATCATGTG
GGACGCCGGCACCGCCCATGCCGCGTCGGAAGCGGCGTCGGCGCCGCCTGCCGCGTCGGCGAGTGCGCCGGCCTCCGCTG
CGCCCGTTGCGTCCGCGCCAACGGCCGCCCTTGCAAAATCCCGCGAGGGGCGCGAGCGTCATGCCGGCACGTTCTGGCAG
GGCGCGGTCGGCAAGGGCGGCGACAGCCCGGGCTGGAATGTCTGGCTCAGCGTCTACGAGCCCGGTCCCAAGGCGCAGGT
ACAGGACAAGGACCCCATCGCCGATACCCTCACCGGCGAGGCCTACGACGACCGTCCGCAGGGCCGCGCGCTGTGGAGCC
TCGAGGGCCGCAACGCGCCCGACCGGCGCTTCGTGTGGCGCGAGCGTGCGGATGGCCTCGACAGCGACGGCCAGCCCGTC
ACCCGCGAGGGCGGTACGCTGTCCGGCATGGTCTCCGCCGACGGCGCGACCGCCGCCGGCACATGGAGCGACGGCGGCCG
CAGCCAGCCCTTCACCCTCAAGCGCGCCGCCCGCTACCTGGAGGTGAGCGGTACGTCCGGCCCGGCCCGGATGACCGAAC
GCTATCCCGTGACCGGCGACGCGGCGGTGGACGCGCTGGTGCAATCCCTGCGCATCGGCCGCTGCGACGCCGACGACATC
GAATGCGTGATCCAGATCAGCATGGTGGGACTGGGCGAGACCGTCAGCCTGCTGCGCATGGTGTGGGCCTACAGCGGCGG
CGCGCACGGCAACTACGGCTTCATGGCGGGCAACTGGCGGCGCGGGCCACAGGGCTTCCAGCCGATCACGCTGGCCGATG
TGCTGAACCCGAGCGCCGCATGCCTGCAGAGCTTCAACACGCAGGTGGTCAATGCGCTCAGGCGCGAGGGCGCACCCGAT
GCCGTGCGCGGCATCCTGAAGGAGAAGGATCTGCGCAGTGCCACGTTTCCGTTTACCCTGCAGGGAGACCGCATCGTCGT
GCACTACGGCCCGTACGAGGTCGGGCCGTATGCGTGGGGTGCGTTCCGCGCGGCGGTGCGCATCGACGATCTCGGTGCCG
CGTGCCGGCGTCCGTCCGCCTGA

Upstream 100 bases:

>100_bases
GCGGAGTCCCATTGATCTGTCGCATGGGTGCTGTCGCCTGTGCGCAGGCGGATCCGGGAACGATGTCCTAGTCTGGGTGT
TTGGTGAGCGAGGAGGATGC

Downstream 100 bases:

>100_bases
AACCGAACGTCATCCATGTCCGCCAATCCTTCCTACGTCGACGAGCAGACGCTCATGCGCCGGCTGCTGTCCGGCAAGAC
CATCGCCGTGGTCGGGCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MRGHAVRGSAQLSAAAGVFVTLMVIMWDAGTAHAASEAASAPPAASASAPASAAPVASAPTAALAKSREGRERHAGTFWQ
GAVGKGGDSPGWNVWLSVYEPGPKAQVQDKDPIADTLTGEAYDDRPQGRALWSLEGRNAPDRRFVWRERADGLDSDGQPV
TREGGTLSGMVSADGATAAGTWSDGGRSQPFTLKRAARYLEVSGTSGPARMTERYPVTGDAAVDALVQSLRIGRCDADDI
ECVIQISMVGLGETVSLLRMVWAYSGGAHGNYGFMAGNWRRGPQGFQPITLADVLNPSAACLQSFNTQVVNALRREGAPD
AVRGILKEKDLRSATFPFTLQGDRIVVHYGPYEVGPYAWGAFRAAVRIDDLGAACRRPSA

Sequences:

>Translated_380_residues
MRGHAVRGSAQLSAAAGVFVTLMVIMWDAGTAHAASEAASAPPAASASAPASAAPVASAPTAALAKSREGRERHAGTFWQ
GAVGKGGDSPGWNVWLSVYEPGPKAQVQDKDPIADTLTGEAYDDRPQGRALWSLEGRNAPDRRFVWRERADGLDSDGQPV
TREGGTLSGMVSADGATAAGTWSDGGRSQPFTLKRAARYLEVSGTSGPARMTERYPVTGDAAVDALVQSLRIGRCDADDI
ECVIQISMVGLGETVSLLRMVWAYSGGAHGNYGFMAGNWRRGPQGFQPITLADVLNPSAACLQSFNTQVVNALRREGAPD
AVRGILKEKDLRSATFPFTLQGDRIVVHYGPYEVGPYAWGAFRAAVRIDDLGAACRRPSA
>Mature_380_residues
MRGHAVRGSAQLSAAAGVFVTLMVIMWDAGTAHAASEAASAPPAASASAPASAAPVASAPTAALAKSREGRERHAGTFWQ
GAVGKGGDSPGWNVWLSVYEPGPKAQVQDKDPIADTLTGEAYDDRPQGRALWSLEGRNAPDRRFVWRERADGLDSDGQPV
TREGGTLSGMVSADGATAAGTWSDGGRSQPFTLKRAARYLEVSGTSGPARMTERYPVTGDAAVDALVQSLRIGRCDADDI
ECVIQISMVGLGETVSLLRMVWAYSGGAHGNYGFMAGNWRRGPQGFQPITLADVLNPSAACLQSFNTQVVNALRREGAPD
AVRGILKEKDLRSATFPFTLQGDRIVVHYGPYEVGPYAWGAFRAAVRIDDLGAACRRPSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40059; Mature: 40059

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGHAVRGSAQLSAAAGVFVTLMVIMWDAGTAHAASEAASAPPAASASAPASAAPVASAP
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCC
TAALAKSREGRERHAGTFWQGAVGKGGDSPGWNVWLSVYEPGPKAQVQDKDPIADTLTGE
HHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHCCC
AYDDRPQGRALWSLEGRNAPDRRFVWRERADGLDSDGQPVTREGGTLSGMVSADGATAAG
CCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCEECCCCCEEEEEECCCCCCCC
TWSDGGRSQPFTLKRAARYLEVSGTSGPARMTERYPVTGDAAVDALVQSLRIGRCDADDI
CCCCCCCCCCEEHHHHHHEEEECCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
ECVIQISMVGLGETVSLLRMVWAYSGGAHGNYGFMAGNWRRGPQGFQPITLADVLNPSAA
EEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHCCCHHH
CLQSFNTQVVNALRREGAPDAVRGILKEKDLRSATFPFTLQGDRIVVHYGPYEVGPYAWG
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEECCCEEEEEECCCCCCCCHHH
AFRAAVRIDDLGAACRRPSA
HHHEEEEECCHHHHHCCCCC
>Mature Secondary Structure
MRGHAVRGSAQLSAAAGVFVTLMVIMWDAGTAHAASEAASAPPAASASAPASAAPVASAP
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCC
TAALAKSREGRERHAGTFWQGAVGKGGDSPGWNVWLSVYEPGPKAQVQDKDPIADTLTGE
HHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHCCC
AYDDRPQGRALWSLEGRNAPDRRFVWRERADGLDSDGQPVTREGGTLSGMVSADGATAAG
CCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCEECCCCCEEEEEECCCCCCCC
TWSDGGRSQPFTLKRAARYLEVSGTSGPARMTERYPVTGDAAVDALVQSLRIGRCDADDI
CCCCCCCCCCEEHHHHHHEEEECCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
ECVIQISMVGLGETVSLLRMVWAYSGGAHGNYGFMAGNWRRGPQGFQPITLADVLNPSAA
EEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHCCCHHH
CLQSFNTQVVNALRREGAPDAVRGILKEKDLRSATFPFTLQGDRIVVHYGPYEVGPYAWG
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEECCCEEEEEECCCCCCCCHHH
AFRAAVRIDDLGAACRRPSA
HHHEEEEECCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA