Definition | Ralstonia solanacearum GMI1000, complete genome. |
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Accession | NC_003295 |
Length | 3,716,413 |
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The map label for this gene is yidB [C]
Identifier: 17547483
GI number: 17547483
Start: 2975526
End: 2976089
Strand: Direct
Name: yidB [C]
Synonym: RSc2764
Alternate gene names: 17547483
Gene position: 2975526-2976089 (Clockwise)
Preceding gene: 17547482
Following gene: 17547487
Centisome position: 80.06
GC content: 70.04
Gene sequence:
>564_bases ATGGGTCTACTCGAATCGGTGCTCGGCCTGGGCGGCAATGACGCCAGCGGCACACAGTCGTCCCTCCTCGGTAACAAGAA GGTGCTGCTGGCCGCCGGCCTGCTGGCCTACCTGGCGATGAAACATGGCAATGCCGGCGCCGCTGGCGCGCAGCAGGATC AACAAGGCGGCGGCCTGTTCGGCTCGCTCGGGTCGCTGGCCGGCATGTTGGGCGGCGCCGGCGCACTCGGTGGCCTGGGC GGCCTGCTGGGCCAGTTGACCGGCGGTGGCGGCAATACCGATCACGCCGCCGTCGATGCCGCCGCGCCGGGCGGTGTCGG CCCGCTGCAGCAGATCCTGGAGCAGGCCGGCCTGGGCGAGCAGGTCCGCTCGTGGATCGGCAACGGCCAGAACCTGCCCG TCTCGGGCGAACAGATCACCCAGGCGCTGGGCGGCAGCGGCGCGCTCTCCCAGTTGGCCTCGACCTTCGGCCTCAACGAG AATGAAGTCGCCTCGCAACTCGCGGAGATCCTGCCCGATGCCGTCAATCACCTGACACCGCAGGGCACGCTGCCGAACGC CTGA
Upstream 100 bases:
>100_bases GTCGCCGTCTCCGCGCTGCATGCCGTCCTCGGCGAATTCTGACCGCTTGATCCCAACCGGCGGGTCCCCTCTCCCCGCCT CTGACGAAAGGAGCTTCATC
Downstream 100 bases:
>100_bases ACGCACGGCGCCGCAAACAGAAAAGCCCGCAATTTGCGGGCTTTTTCATGCATTGCCGCTCAAGGCGGCGCCAACGGGCC GGGACGCTCAGGCAAACGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MGLLESVLGLGGNDASGTQSSLLGNKKVLLAAGLLAYLAMKHGNAGAAGAQQDQQGGGLFGSLGSLAGMLGGAGALGGLG GLLGQLTGGGGNTDHAAVDAAAPGGVGPLQQILEQAGLGEQVRSWIGNGQNLPVSGEQITQALGGSGALSQLASTFGLNE NEVASQLAEILPDAVNHLTPQGTLPNA
Sequences:
>Translated_187_residues MGLLESVLGLGGNDASGTQSSLLGNKKVLLAAGLLAYLAMKHGNAGAAGAQQDQQGGGLFGSLGSLAGMLGGAGALGGLG GLLGQLTGGGGNTDHAAVDAAAPGGVGPLQQILEQAGLGEQVRSWIGNGQNLPVSGEQITQALGGSGALSQLASTFGLNE NEVASQLAEILPDAVNHLTPQGTLPNA >Mature_186_residues GLLESVLGLGGNDASGTQSSLLGNKKVLLAAGLLAYLAMKHGNAGAAGAQQDQQGGGLFGSLGSLAGMLGGAGALGGLGG LLGQLTGGGGNTDHAAVDAAAPGGVGPLQQILEQAGLGEQVRSWIGNGQNLPVSGEQITQALGGSGALSQLASTFGLNEN EVASQLAEILPDAVNHLTPQGTLPNA
Specific function: Unknown
COG id: COG3753
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17996; Mature: 17865
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLLESVLGLGGNDASGTQSSLLGNKKVLLAAGLLAYLAMKHGNAGAAGAQQDQQGGGLF CCHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH GSLGSLAGMLGGAGALGGLGGLLGQLTGGGGNTDHAAVDAAAPGGVGPLQQILEQAGLGE HHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHCCCCH QVRSWIGNGQNLPVSGEQITQALGGSGALSQLASTFGLNENEVASQLAEILPDAVNHLTP HHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC QGTLPNA CCCCCCC >Mature Secondary Structure GLLESVLGLGGNDASGTQSSLLGNKKVLLAAGLLAYLAMKHGNAGAAGAQQDQQGGGLF CHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH GSLGSLAGMLGGAGALGGLGGLLGQLTGGGGNTDHAAVDAAAPGGVGPLQQILEQAGLGE HHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHCCCCH QVRSWIGNGQNLPVSGEQITQALGGSGALSQLASTFGLNENEVASQLAEILPDAVNHLTP HHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC QGTLPNA CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA