Definition | Ralstonia solanacearum GMI1000, complete genome. |
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Accession | NC_003295 |
Length | 3,716,413 |
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The map label for this gene is thiL [H]
Identifier: 17547487
GI number: 17547487
Start: 2980257
End: 2981255
Strand: Direct
Name: thiL [H]
Synonym: RSc2768
Alternate gene names: 17547487
Gene position: 2980257-2981255 (Clockwise)
Preceding gene: 17547483
Following gene: 17547488
Centisome position: 80.19
GC content: 73.87
Gene sequence:
>999_bases GTGCTGAAGCCCCCTGTCCCTGCCGATTCCGCTGAACACCTGTCCGAATTCGGGCTGATCCGCCGGTATTTCACCCGACC GGCGCGGCACGCCACGCTCGGCGTCGGCGACGATTGCGCGCTGCTCGGCCCGCGCCCCGGTCACGAACTGGCGATCTCCA CCGACATGCTGGTCGCCGGTCGCCACTTCTTTGCCGATGCCGAGCCGCGCGCGCTCGGCCACAAGGCGCTGGCGGTCAAC CTGTCGGACCTGGCCGCGATGGGCGCCGAGCCGCGCGCCTTTACGCTGGCCATGGCGCTGCCGGCGGCCGATCCGGCCTG GCTGGGCCCGTTCGCCGACGGCCTGCTGGCGCTGGCCGACGCCTTTCACTGCGAACTGATCGGCGGCGACACCACGCGCG GGCCGCTGACGCTCAGCCTGACGGTCTTCGGCGACGTTCCGGCCGACCTCGCGCTGCGCCGCGATGCTGCCCGCCCGGAC GACGACCTGTGGGTCTCCGGCACCGTGGGCGATGCACGCCTGGCACTGGGCGCGCTGCGCGGCGAATGGCCGCTCGCGCC CGAGGCGCTGGCCCGGGTGCAGCCGCGCATGGATGCGCCCACGCCCCGCGTGGCGCTGGGCCTGGCGCTGCGCGGCATTG CCCGGGCGGCGCTGGACGTGTCCGACGGGCTGCTGGGCGACCTGGGCCACATCCTGGCCCAATCGCAGGTCGGGGCGACC GTCGAGGTGGATCGCGTGCCGCGCTCCGCCACGCTGGCCGAGGAGCCGCCCGCGCGCCAGCTGCAGTGCATGCTGGCCGG CGGCGACGACTATGAACTCTGCTTCACGGCCCCCGCCGGCCTGCGCGAGGCCGTGCTGGCGGCGGGGCAGCACGCCGGCG TCCCGGTCACCCGCATCGGACGCATCGACACCGAGCCCGGCCTGCGGCTGATCGACGCGCACGGCAAGCCGGTCGCGTTC AGCCAGGCCGGATTCGACCATTTCTCTTCCACATCATGA
Upstream 100 bases:
>100_bases CGGGATTTTGGGTGGGGGTGTTGTGCGCATTCGCTACAATATTCCACCCGTCCTGACACGGCACCCCCGGGCTTGCCCCA TTCCTGCCTCCGTCAAAGCC
Downstream 100 bases:
>100_bases TGTCTTCCGCCCCCTTCCCGCCCTCCACCCCGCCCAGCCAGCCCGAGACCGTGGTTCTCGAGGCCGGCCAGACCGCGCAG GTGCGCCGCCCGACGGCACG
Product: thiamine monophosphate kinase
Products: NA
Alternate protein names: Thiamine-phosphate kinase [H]
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MLKPPVPADSAEHLSEFGLIRRYFTRPARHATLGVGDDCALLGPRPGHELAISTDMLVAGRHFFADAEPRALGHKALAVN LSDLAAMGAEPRAFTLAMALPAADPAWLGPFADGLLALADAFHCELIGGDTTRGPLTLSLTVFGDVPADLALRRDAARPD DDLWVSGTVGDARLALGALRGEWPLAPEALARVQPRMDAPTPRVALGLALRGIARAALDVSDGLLGDLGHILAQSQVGAT VEVDRVPRSATLAEEPPARQLQCMLAGGDDYELCFTAPAGLREAVLAAGQHAGVPVTRIGRIDTEPGLRLIDAHGKPVAF SQAGFDHFSSTS
Sequences:
>Translated_332_residues MLKPPVPADSAEHLSEFGLIRRYFTRPARHATLGVGDDCALLGPRPGHELAISTDMLVAGRHFFADAEPRALGHKALAVN LSDLAAMGAEPRAFTLAMALPAADPAWLGPFADGLLALADAFHCELIGGDTTRGPLTLSLTVFGDVPADLALRRDAARPD DDLWVSGTVGDARLALGALRGEWPLAPEALARVQPRMDAPTPRVALGLALRGIARAALDVSDGLLGDLGHILAQSQVGAT VEVDRVPRSATLAEEPPARQLQCMLAGGDDYELCFTAPAGLREAVLAAGQHAGVPVTRIGRIDTEPGLRLIDAHGKPVAF SQAGFDHFSSTS >Mature_332_residues MLKPPVPADSAEHLSEFGLIRRYFTRPARHATLGVGDDCALLGPRPGHELAISTDMLVAGRHFFADAEPRALGHKALAVN LSDLAAMGAEPRAFTLAMALPAADPAWLGPFADGLLALADAFHCELIGGDTTRGPLTLSLTVFGDVPADLALRRDAARPD DDLWVSGTVGDARLALGALRGEWPLAPEALARVQPRMDAPTPRVALGLALRGIARAALDVSDGLLGDLGHILAQSQVGAT VEVDRVPRSATLAEEPPARQLQCMLAGGDDYELCFTAPAGLREAVLAAGQHAGVPVTRIGRIDTEPGLRLIDAHGKPVAF SQAGFDHFSSTS
Specific function: Thiamine biosynthesis. [C]
COG id: COG0611
COG function: function code H; Thiamine monophosphate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiamine-monophosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786619, Length=321, Percent_Identity=47.0404984423676, Blast_Score=251, Evalue=6e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR016188 - InterPro: IPR006283 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =2.7.4.16 [H]
Molecular weight: Translated: 34744; Mature: 34744
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKPPVPADSAEHLSEFGLIRRYFTRPARHATLGVGDDCALLGPRPGHELAISTDMLVAG CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEECCCCCCEEEEECCEEEEC RHFFADAEPRALGHKALAVNLSDLAAMGAEPRAFTLAMALPAADPAWLGPFADGLLALAD HHHCCCCCCHHCCCEEEEEEHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHH AFHCELIGGDTTRGPLTLSLTVFGDVPADLALRRDAARPDDDLWVSGTVGDARLALGALR HHEEEEECCCCCCCCEEEEEEEECCCCHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHC GEWPLAPEALARVQPRMDAPTPRVALGLALRGIARAALDVSDGLLGDLGHILAQSQVGAT CCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCE VEVDRVPRSATLAEEPPARQLQCMLAGGDDYELCFTAPAGLREAVLAAGQHAGVPVTRIG EEECCCCCCCCCCCCCCHHHEEEEEECCCCEEEEEECCCCHHHHHHHCCCCCCCCEEEEC RIDTEPGLRLIDAHGKPVAFSQAGFDHFSSTS CCCCCCCCEEEECCCCEEEECCCCCCCCCCCC >Mature Secondary Structure MLKPPVPADSAEHLSEFGLIRRYFTRPARHATLGVGDDCALLGPRPGHELAISTDMLVAG CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEECCCCCCEEEEECCEEEEC RHFFADAEPRALGHKALAVNLSDLAAMGAEPRAFTLAMALPAADPAWLGPFADGLLALAD HHHCCCCCCHHCCCEEEEEEHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHH AFHCELIGGDTTRGPLTLSLTVFGDVPADLALRRDAARPDDDLWVSGTVGDARLALGALR HHEEEEECCCCCCCCEEEEEEEECCCCHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHC GEWPLAPEALARVQPRMDAPTPRVALGLALRGIARAALDVSDGLLGDLGHILAQSQVGAT CCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCE VEVDRVPRSATLAEEPPARQLQCMLAGGDDYELCFTAPAGLREAVLAAGQHAGVPVTRIG EEECCCCCCCCCCCCCCHHHEEEEEECCCCEEEEEECCCCHHHHHHHCCCCCCCCEEEEC RIDTEPGLRLIDAHGKPVAFSQAGFDHFSSTS CCCCCCCCEEEECCCCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677609 [H]