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The map label for this gene is yohK [H]

Identifier: 17547389

GI number: 17547389

Start: 2880036

End: 2880758

Strand: Direct

Name: yohK [H]

Synonym: RSc2670

Alternate gene names: 17547389

Gene position: 2880036-2880758 (Clockwise)

Preceding gene: 17547388

Following gene: 17547390

Centisome position: 77.5

GC content: 69.99

Gene sequence:

>723_bases
ATGACGCCCGACCTGCACAAGCTCTGGGTCTACCTGGCCGCCACGCCGCTGCTGGGGCTGACCGCCACGCTGGTGGCCTA
TGTCTTCGCCTACGGGATCTACCAGCGGCTGCGCTTCAATCCGCTCGCCAATCCGGTGCTGATCGCGGTAGCCATCCTGG
CCACGCTGCTGACCGCGACGGGCACGCCGTACAAGACCTACTTCGACGGCGCGCAGTTCGTGCACTTCCTGCTGGGCCCG
GCCACGGTGGCGCTGGCGGTGCCGCTGTACCACCAGTGGCCCAAGCTGCGGCGCCATGCCATTCCGCTACTGAGCGGGCT
GCTCGCCGGCTCCCTGGTCGCCACCCTCTCGGCGGTCGGCGTGGCGTGGCTGCTCGGCGCGTCGCCGGAGACGCTGCGCT
CGCTGGCCTCCAAGTCGGTGACCATCCCGATCGCCATGGGGGTGTCCGAGAAGATCGGCGGATCGCCGTCGCTCACGGCG
GTGCTGGTGATGATGACCGGCCTGCTGGGGGCGAGCACCACCACGCGACTGCTGAACCTGCTGGGCATCCGCGAATACAG
CGTGCGCGGCTTCGCCACCGGCATCGCGGCGCACGGCATCGGTACGGCGCGCGCGTTCCAGGTAAGCCCGGAGGCCGGCG
CGTTCGCAGCGCTGGGCATGGGGCTGAACGGCATCCTGACAGCGGTGATGGTGCCGCTGCTCGCCGCCTGGATTCCGCAC
TAG

Upstream 100 bases:

>100_bases
CGGTCAGCACGTGGCTGGCCATCGGCGTGTGCGCGCTGGTCACGCGGGCGCTGATGCGCCGCATGGGCGATCGCGGCGAA
ACGCACGAAGAGGTGGCGCC

Downstream 100 bases:

>100_bases
GCCGGCATCCAGCTTCCGCCCCGGATCTCACTGCCCGGGCAGCGTCGCCACCCTCCTGCAGGCTCCTGACAGAACGCTGT
CAGGAGCCCCCCGCCACAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MTPDLHKLWVYLAATPLLGLTATLVAYVFAYGIYQRLRFNPLANPVLIAVAILATLLTATGTPYKTYFDGAQFVHFLLGP
ATVALAVPLYHQWPKLRRHAIPLLSGLLAGSLVATLSAVGVAWLLGASPETLRSLASKSVTIPIAMGVSEKIGGSPSLTA
VLVMMTGLLGASTTTRLLNLLGIREYSVRGFATGIAAHGIGTARAFQVSPEAGAFAALGMGLNGILTAVMVPLLAAWIPH

Sequences:

>Translated_240_residues
MTPDLHKLWVYLAATPLLGLTATLVAYVFAYGIYQRLRFNPLANPVLIAVAILATLLTATGTPYKTYFDGAQFVHFLLGP
ATVALAVPLYHQWPKLRRHAIPLLSGLLAGSLVATLSAVGVAWLLGASPETLRSLASKSVTIPIAMGVSEKIGGSPSLTA
VLVMMTGLLGASTTTRLLNLLGIREYSVRGFATGIAAHGIGTARAFQVSPEAGAFAALGMGLNGILTAVMVPLLAAWIPH
>Mature_239_residues
TPDLHKLWVYLAATPLLGLTATLVAYVFAYGIYQRLRFNPLANPVLIAVAILATLLTATGTPYKTYFDGAQFVHFLLGPA
TVALAVPLYHQWPKLRRHAIPLLSGLLAGSLVATLSAVGVAWLLGASPETLRSLASKSVTIPIAMGVSEKIGGSPSLTAV
LVMMTGLLGASTTTRLLNLLGIREYSVRGFATGIAAHGIGTARAFQVSPEAGAFAALGMGLNGILTAVMVPLLAAWIPH

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=212, Percent_Identity=41.9811320754717, Blast_Score=157, Evalue=6e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005261
- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 25082; Mature: 24951

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPDLHKLWVYLAATPLLGLTATLVAYVFAYGIYQRLRFNPLANPVLIAVAILATLLTAT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
GTPYKTYFDGAQFVHFLLGPATVALAVPLYHQWPKLRRHAIPLLSGLLAGSLVATLSAVG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAWLLGASPETLRSLASKSVTIPIAMGVSEKIGGSPSLTAVLVMMTGLLGASTTTRLLNL
HHHHHCCCHHHHHHHHHCCCEEEEEECCHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
LGIREYSVRGFATGIAAHGIGTARAFQVSPEAGAFAALGMGLNGILTAVMVPLLAAWIPH
HHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TPDLHKLWVYLAATPLLGLTATLVAYVFAYGIYQRLRFNPLANPVLIAVAILATLLTAT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
GTPYKTYFDGAQFVHFLLGPATVALAVPLYHQWPKLRRHAIPLLSGLLAGSLVATLSAVG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAWLLGASPETLRSLASKSVTIPIAMGVSEKIGGSPSLTAVLVMMTGLLGASTTTRLLNL
HHHHHCCCHHHHHHHHHCCCEEEEEECCHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
LGIREYSVRGFATGIAAHGIGTARAFQVSPEAGAFAALGMGLNGILTAVMVPLLAAWIPH
HHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 2575702 [H]