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The map label for this gene is yohJ [C]

Identifier: 17547388

GI number: 17547388

Start: 2879662

End: 2880039

Strand: Direct

Name: yohJ [C]

Synonym: RSc2669

Alternate gene names: 17547388

Gene position: 2879662-2880039 (Clockwise)

Preceding gene: 17547387

Following gene: 17547389

Centisome position: 77.48

GC content: 66.4

Gene sequence:

>378_bases
GTGCTGCAAACCTTCGCCATCCTGCTGACCTTCCAGTCGGTGGGTGAGCTATTGAGCTATGCCCTGCATCTGCCGGTGCC
CGGACCGGTGATCGGCATGATGCTGCTGTTCCTGACCCTGCTGGCCGACCGCGGCGGCATCCTGGAAGTCATGCAGGGCA
CGGTGACCGAACTGCTGCGGCACCTGTCGATCCTGTTCGTGCCGGCCGGCGTGGGGGTGATGGCACAGATGAACCGCATC
AGCCAGGAATGGCTGCCGATCGTGGTGGCGGTCGCGGTCAGCACGTGGCTGGCCATCGGCGTGTGCGCGCTGGTCACGCG
GGCGCTGATGCGCCGCATGGGCGATCGCGGCGAAACGCACGAAGAGGTGGCGCCATGA

Upstream 100 bases:

>100_bases
GCCGGTCGAGCATTGGATCGAACTGGTGGACCGCATGCTGGCCGGATGACCGGACCGTGCATCGCGCGGCCGATCGACGC
TTGTCAATTTTGGAGGCCGC

Downstream 100 bases:

>100_bases
CGCCCGACCTGCACAAGCTCTGGGTCTACCTGGCCGCCACGCCGCTGCTGGGGCTGACCGCCACGCTGGTGGCCTATGTC
TTCGCCTACGGGATCTACCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MLQTFAILLTFQSVGELLSYALHLPVPGPVIGMMLLFLTLLADRGGILEVMQGTVTELLRHLSILFVPAGVGVMAQMNRI
SQEWLPIVVAVAVSTWLAIGVCALVTRALMRRMGDRGETHEEVAP

Sequences:

>Translated_125_residues
MLQTFAILLTFQSVGELLSYALHLPVPGPVIGMMLLFLTLLADRGGILEVMQGTVTELLRHLSILFVPAGVGVMAQMNRI
SQEWLPIVVAVAVSTWLAIGVCALVTRALMRRMGDRGETHEEVAP
>Mature_125_residues
MLQTFAILLTFQSVGELLSYALHLPVPGPVIGMMLLFLTLLADRGGILEVMQGTVTELLRHLSILFVPAGVGVMAQMNRI
SQEWLPIVVAVAVSTWLAIGVCALVTRALMRRMGDRGETHEEVAP

Specific function: Unknown

COG id: COG1380

COG function: function code R; Putative effector of murein hydrolase LrgA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0299 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005538
- InterPro:   IPR022957 [H]

Pfam domain/function: PF03788 LrgA [H]

EC number: NA

Molecular weight: Translated: 13581; Mature: 13581

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQTFAILLTFQSVGELLSYALHLPVPGPVIGMMLLFLTLLADRGGILEVMQGTVTELLR
CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
HLSILFVPAGVGVMAQMNRISQEWLPIVVAVAVSTWLAIGVCALVTRALMRRMGDRGETH
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EEVAP
CCCCC
>Mature Secondary Structure
MLQTFAILLTFQSVGELLSYALHLPVPGPVIGMMLLFLTLLADRGGILEVMQGTVTELLR
CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
HLSILFVPAGVGVMAQMNRISQEWLPIVVAVAVSTWLAIGVCALVTRALMRRMGDRGETH
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EEVAP
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA