Definition | Ralstonia solanacearum GMI1000, complete genome. |
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Accession | NC_003295 |
Length | 3,716,413 |
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The map label for this gene is aroG1 [H]
Identifier: 17547379
GI number: 17547379
Start: 2869768
End: 2870847
Strand: Direct
Name: aroG1 [H]
Synonym: RSc2660
Alternate gene names: 17547379
Gene position: 2869768-2870847 (Clockwise)
Preceding gene: 17547378
Following gene: 17547381
Centisome position: 77.22
GC content: 66.39
Gene sequence:
>1080_bases ATGCCGAAGAACACCGACGACCTGCGCATTCGCGAACTGAAAGAGCTGACCCCGCCGGCGCACCTGATCCGCGAATTCCC GTGCAACGACGCCGTTTCCGAGCTGATCTACCAGAGCCGCACGGCGATGCACCGCATCCTGCACGGCATGGACGACCGCC TGATCGTCATCATCGGGCCGTGCTCGATCCACGACACCAAGGCCGCCCTCGACTACGCGCGCCGCCTGGTCGAACAGCGC GAGCGCTTCAAGGCCGACCTGGAAATCGTCATGCGCGTGTACTTCGAGAAGCCGCGCACCACGGTCGGCTGGAAGGGCCT GATCAACGACCCGTACATGGACGGCAGCTTCAAGATCAACGACGGCCTGCGCACCGCGCGCGAGCTGCTGGTGAACATCA ACGAGCTGGGCGTGCCGGCGGGCACCGAATACCTCGACATGATCAGCCCGCAGTACATCGCCGACCTGGTGAGCTGGGGC GCGATCGGGGCGCGCACGACCGAATCGCAGGTGCACCGCGAACTCGCCTCCGGACTGTCGTGCCCGGTCGGCTTCAAGAA CGGCACCGATGGCAACGTGAAGATCGCCGTGGACGCGATCAAGGCGGCGTCGCAGCCGCACCACTTCCTGTCGGTCACCA AGGGCGGCCACTCGGCCATCGTGTCGACGGCGGGCAACGAGGATTGCCACATCATCCTGCGCGGCGGCAAGGCGCCCAAC TACGATGCCGCCAGCGTGCAGGCGGCCTGCGAAGACATCGCCAAGTCCGGCCTGGCCGCGCGCCTGATGATCGATGCCTC GCACGCCAACAGCAGCAAGAAGCACGAGAACCAGATCCCGGTCTGCGAAGACATCGGCCGCCAGATCGCCGGCGGCGACG ACCGCATCGTCGGCGTGATGGTGGAATCGCACATCAATGCCGGCCGCCAGGACCACGTGCAGGGCACCCCGGTCGAGGAC CTGAACTACGGCCAGAGCGTGACCGACGCCTGCATCGGCTGGGACGATTCGCTCAAGGTACTGGAAACGCTGGCCGACGC CGTGCGCAAGCGCCGGCTGGTGCCCCGCAACGGCAACTGA
Upstream 100 bases:
>100_bases CGTCACCAGCCCGATCCCGGCCCGACGCGAAAACATGATCCGAACACAGTAGCCCCTTCCAATACACGACACGAACCAAG ACATCCCCCGGGAGCTTTCC
Downstream 100 bases:
>100_bases GCCCGCGCACGCGCACTGGCACCGACGAGCCGACGCCAACCTCCGGGTTGGCGTCGGCTTTTTTACGCCCGTTTGACCCG TTCGCCAATGACGTCGCTGT
Product: phospho-2-dehydro-3-deoxyheptonate aldolase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MPKNTDDLRIRELKELTPPAHLIREFPCNDAVSELIYQSRTAMHRILHGMDDRLIVIIGPCSIHDTKAALDYARRLVEQR ERFKADLEIVMRVYFEKPRTTVGWKGLINDPYMDGSFKINDGLRTARELLVNINELGVPAGTEYLDMISPQYIADLVSWG AIGARTTESQVHRELASGLSCPVGFKNGTDGNVKIAVDAIKAASQPHHFLSVTKGGHSAIVSTAGNEDCHIILRGGKAPN YDAASVQAACEDIAKSGLAARLMIDASHANSSKKHENQIPVCEDIGRQIAGGDDRIVGVMVESHINAGRQDHVQGTPVED LNYGQSVTDACIGWDDSLKVLETLADAVRKRRLVPRNGN
Sequences:
>Translated_359_residues MPKNTDDLRIRELKELTPPAHLIREFPCNDAVSELIYQSRTAMHRILHGMDDRLIVIIGPCSIHDTKAALDYARRLVEQR ERFKADLEIVMRVYFEKPRTTVGWKGLINDPYMDGSFKINDGLRTARELLVNINELGVPAGTEYLDMISPQYIADLVSWG AIGARTTESQVHRELASGLSCPVGFKNGTDGNVKIAVDAIKAASQPHHFLSVTKGGHSAIVSTAGNEDCHIILRGGKAPN YDAASVQAACEDIAKSGLAARLMIDASHANSSKKHENQIPVCEDIGRQIAGGDDRIVGVMVESHINAGRQDHVQGTPVED LNYGQSVTDACIGWDDSLKVLETLADAVRKRRLVPRNGN >Mature_358_residues PKNTDDLRIRELKELTPPAHLIREFPCNDAVSELIYQSRTAMHRILHGMDDRLIVIIGPCSIHDTKAALDYARRLVEQRE RFKADLEIVMRVYFEKPRTTVGWKGLINDPYMDGSFKINDGLRTARELLVNINELGVPAGTEYLDMISPQYIADLVSWGA IGARTTESQVHRELASGLSCPVGFKNGTDGNVKIAVDAIKAASQPHHFLSVTKGGHSAIVSTAGNEDCHIILRGGKAPNY DAASVQAACEDIAKSGLAARLMIDASHANSSKKHENQIPVCEDIGRQIAGGDDRIVGVMVESHINAGRQDHVQGTPVEDL NYGQSVTDACIGWDDSLKVLETLADAVRKRRLVPRNGN
Specific function: Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: COG0722
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786969, Length=352, Percent_Identity=64.2045454545455, Blast_Score=473, Evalue=1e-134, Organism=Escherichia coli, GI1787996, Length=347, Percent_Identity=54.4668587896254, Blast_Score=395, Evalue=1e-111, Organism=Escherichia coli, GI1788953, Length=330, Percent_Identity=50.6060606060606, Blast_Score=344, Evalue=4e-96, Organism=Saccharomyces cerevisiae, GI6320240, Length=355, Percent_Identity=54.0845070422535, Blast_Score=375, Evalue=1e-105, Organism=Saccharomyces cerevisiae, GI6319726, Length=364, Percent_Identity=53.5714285714286, Blast_Score=366, Evalue=1e-102,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006219 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 39332; Mature: 39201
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKNTDDLRIRELKELTPPAHLIREFPCNDAVSELIYQSRTAMHRILHGMDDRLIVIIGP CCCCCCCHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC CSIHDTKAALDYARRLVEQRERFKADLEIVMRVYFEKPRTTVGWKGLINDPYMDGSFKIN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEC DGLRTARELLVNINELGVPAGTEYLDMISPQYIADLVSWGAIGARTTESQVHRELASGLS HHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC CPVGFKNGTDGNVKIAVDAIKAASQPHHFLSVTKGGHSAIVSTAGNEDCHIILRGGKAPN CCCCCCCCCCCCEEEEEEEHHHCCCCCCEEEEECCCCEEEEECCCCCCEEEEEECCCCCC YDAASVQAACEDIAKSGLAARLMIDASHANSSKKHENQIPVCEDIGRQIAGGDDRIVGVM CCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHCCCCCHHHHHHHHHCCCCCCEEEEE VESHINAGRQDHVQGTPVEDLNYGQSVTDACIGWDDSLKVLETLADAVRKRRLVPRNGN EHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure PKNTDDLRIRELKELTPPAHLIREFPCNDAVSELIYQSRTAMHRILHGMDDRLIVIIGP CCCCCCHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC CSIHDTKAALDYARRLVEQRERFKADLEIVMRVYFEKPRTTVGWKGLINDPYMDGSFKIN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEC DGLRTARELLVNINELGVPAGTEYLDMISPQYIADLVSWGAIGARTTESQVHRELASGLS HHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC CPVGFKNGTDGNVKIAVDAIKAASQPHHFLSVTKGGHSAIVSTAGNEDCHIILRGGKAPN CCCCCCCCCCCCEEEEEEEHHHCCCCCCEEEEECCCCEEEEECCCCCCEEEEEECCCCCC YDAASVQAACEDIAKSGLAARLMIDASHANSSKKHENQIPVCEDIGRQIAGGDDRIVGVM CCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHCCCCCHHHHHHHHHCCCCCCEEEEE VESHINAGRQDHVQGTPVEDLNYGQSVTDACIGWDDSLKVLETLADAVRKRRLVPRNGN EHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]