The gene/protein map for NC_003295 is currently unavailable.
Definition Ralstonia solanacearum GMI1000, complete genome.
Accession NC_003295
Length 3,716,413

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The map label for this gene is recN [H]

Identifier: 17547370

GI number: 17547370

Start: 2852708

End: 2854417

Strand: Direct

Name: recN [H]

Synonym: RSc2651

Alternate gene names: 17547370

Gene position: 2852708-2854417 (Clockwise)

Preceding gene: 17547369

Following gene: 17547371

Centisome position: 76.76

GC content: 72.92

Gene sequence:

>1710_bases
ATGCTGCACAGCCTGACCATCCGCGATTTCGTCATCGTCCATGCCCTGGACCTCGACCTGGCCGACGGCTTCACCGTGTT
CACGGGCGAGACCGGCGCCGGCAAGTCCATCCTGATCGACGCGCTGGCGCTGACGCTCGGCGAGCGCGCCGATGCCACCG
TGGTGCGCGAGGGCGCGCCGCGCGCCGACATCACCGCCGCGTTCGACACCCACCCGCAGGTGCTCGCCTGGCTGGAAGCG
CACGAGCTGCACGGCGACGACGGCACCATCCTGCTGCGCCGCACGGTCGATGCCGCCGGCCGCAGCAAGGCCTTCATCAA
CGGCGCGGCCGTCACGCTGGCGCAGTTGCGCGAGGTCGGCGAACAGCTGGTCGACATCCACGGCCAGCATGCGCACCAGC
TGCTGCTCAAGACCGATGCCCAGCGCCGCCTGCTCGATGCCCATGCGGGGCTGGAAGACGAGGTGCGCGCGGTCGGCGAG
CGGTATCGCGCATGGCAGGCGGTGGTCCGCCTGCGCGAGGCGGCCGAGCAGCAGTCGCGCGAAGCGCAGCTCGAGCGCGA
GCGCGTGGAATGGCAGGTCAGCGAATTGCAGAAGCTCGCCCCGCAGCCGGGCGAGTGGGAAGAAGTCCAGGCCGAGCATC
ACCGCCTGTCGCACGCGGCCAGCCTGATCGAGGGCACGCGCGCGGCGCTGGATACGCTGTCCGAAGCGGACAGCGCCGTG
CTCACGCAGCTCGGTGCGGCGGTGCACGGCCTGCAGGCCCTGGCCGAGATCGACCCGGCACTGGCCGACGTGCTGGCCGC
GCTGGAGCCCGCGCAGGTGCAAGTCCAGGAAGCCGTGCATTCGCTCGCCCGCTACGCCGACCGCGCCGAACTGGATCCGG
ACCGGCTGGCCGAGGTCGACGCACGCCTGCAGGCGCTGCACACCATGGCGCGCAAATACCGCGTCGCCCCCGAGACCCTG
CCTGCCGAGCTGACGCAGCGGCAGGCGCAGCTGGCCGCATTGCAGGCCGCCTCCGACCTGGACGCGCTGCAGGCGCAAGA
GGCGCAAACCCATGCGGCCTATCTGCAAGCCGCGCAGGCGCTGTCGCGCGGGCGAGCCAAAGCCGCGCGCGAACTGGCCG
ACGCCGTGACCGGCGCCATGCAGGGGCTGTCGATGGCGGGCGGGCGGTTCGAGATCGCGCTGCATCCGCTGGAACCGGGC
GGCGCGGCCGGGCTGGAGCAGGTGGAGTTCCTGGTCGCCGGACATGCGGGCGTGTCGCCGCGTCCGCTGGCCAAGGTGGC
CTCGGGCGGCGAACTCGCCCGGATCAGCCTAGCGATCTCGGTGATCGCCAGCGAGGCCAGCCCGACCCCGACGCTGATCT
TCGACGAGGTCGACTCCGGCATCGGCGGCGCCGTGGCCGAGGTGGTCGGCCGGCGGCTGCGCGAACTGGGCACACGCCGC
CAGGTGCTGTGCGTGACCCACCTGCCGCAGGTGGCGGCGCTGGCCAACCACCACGTGCAGGTCGCCAAGCAGACCGTGGA
CGGCAGCACGCGCTCCGACCTGGTGGTGCTCGATGCCACCGGCCGCGTCGACGAGATCGCCCGCATGCTGGGCGGCGCAT
CGCTGACCGACACCACGCGCCGCCACGCCGACGAAATGCTCGCCGCGGGCCGGGCGCATCCGGCGCCCGCGCCGGCCGGG
CAGCGGAAATCCCGGCGCGCGGTCCAGTGA

Upstream 100 bases:

>100_bases
ACAACTACTACGCCACGCTGCGCAAGAAGCTGCACTGGCACGAGTACCCGACCGAAGACAACCGGCTGTAACGCCAACAA
CCGATATCGCTCGACGCTCC

Downstream 100 bases:

>100_bases
TTGCCTATACCGACAACATCGCCGCCCGCATCACGGTGCCGTCTTCCGGCGAACCGACGTTCCAACCCCAAGGAGAATTC
CATGGCCCGACCGGCTGCCC

Product: DNA repair protein

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 569; Mature: 569

Protein sequence:

>569_residues
MLHSLTIRDFVIVHALDLDLADGFTVFTGETGAGKSILIDALALTLGERADATVVREGAPRADITAAFDTHPQVLAWLEA
HELHGDDGTILLRRTVDAAGRSKAFINGAAVTLAQLREVGEQLVDIHGQHAHQLLLKTDAQRRLLDAHAGLEDEVRAVGE
RYRAWQAVVRLREAAEQQSREAQLERERVEWQVSELQKLAPQPGEWEEVQAEHHRLSHAASLIEGTRAALDTLSEADSAV
LTQLGAAVHGLQALAEIDPALADVLAALEPAQVQVQEAVHSLARYADRAELDPDRLAEVDARLQALHTMARKYRVAPETL
PAELTQRQAQLAALQAASDLDALQAQEAQTHAAYLQAAQALSRGRAKAARELADAVTGAMQGLSMAGGRFEIALHPLEPG
GAAGLEQVEFLVAGHAGVSPRPLAKVASGGELARISLAISVIASEASPTPTLIFDEVDSGIGGAVAEVVGRRLRELGTRR
QVLCVTHLPQVAALANHHVQVAKQTVDGSTRSDLVVLDATGRVDEIARMLGGASLTDTTRRHADEMLAAGRAHPAPAPAG
QRKSRRAVQ

Sequences:

>Translated_569_residues
MLHSLTIRDFVIVHALDLDLADGFTVFTGETGAGKSILIDALALTLGERADATVVREGAPRADITAAFDTHPQVLAWLEA
HELHGDDGTILLRRTVDAAGRSKAFINGAAVTLAQLREVGEQLVDIHGQHAHQLLLKTDAQRRLLDAHAGLEDEVRAVGE
RYRAWQAVVRLREAAEQQSREAQLERERVEWQVSELQKLAPQPGEWEEVQAEHHRLSHAASLIEGTRAALDTLSEADSAV
LTQLGAAVHGLQALAEIDPALADVLAALEPAQVQVQEAVHSLARYADRAELDPDRLAEVDARLQALHTMARKYRVAPETL
PAELTQRQAQLAALQAASDLDALQAQEAQTHAAYLQAAQALSRGRAKAARELADAVTGAMQGLSMAGGRFEIALHPLEPG
GAAGLEQVEFLVAGHAGVSPRPLAKVASGGELARISLAISVIASEASPTPTLIFDEVDSGIGGAVAEVVGRRLRELGTRR
QVLCVTHLPQVAALANHHVQVAKQTVDGSTRSDLVVLDATGRVDEIARMLGGASLTDTTRRHADEMLAAGRAHPAPAPAG
QRKSRRAVQ
>Mature_569_residues
MLHSLTIRDFVIVHALDLDLADGFTVFTGETGAGKSILIDALALTLGERADATVVREGAPRADITAAFDTHPQVLAWLEA
HELHGDDGTILLRRTVDAAGRSKAFINGAAVTLAQLREVGEQLVDIHGQHAHQLLLKTDAQRRLLDAHAGLEDEVRAVGE
RYRAWQAVVRLREAAEQQSREAQLERERVEWQVSELQKLAPQPGEWEEVQAEHHRLSHAASLIEGTRAALDTLSEADSAV
LTQLGAAVHGLQALAEIDPALADVLAALEPAQVQVQEAVHSLARYADRAELDPDRLAEVDARLQALHTMARKYRVAPETL
PAELTQRQAQLAALQAASDLDALQAQEAQTHAAYLQAAQALSRGRAKAARELADAVTGAMQGLSMAGGRFEIALHPLEPG
GAAGLEQVEFLVAGHAGVSPRPLAKVASGGELARISLAISVIASEASPTPTLIFDEVDSGIGGAVAEVVGRRLRELGTRR
QVLCVTHLPQVAALANHHVQVAKQTVDGSTRSDLVVLDATGRVDEIARMLGGASLTDTTRRHADEMLAAGRAHPAPAPAG
QRKSRRAVQ

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=557, Percent_Identity=43.9856373429084, Blast_Score=409, Evalue=1e-115,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 60685; Mature: 60685

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHSLTIRDFVIVHALDLDLADGFTVFTGETGAGKSILIDALALTLGERADATVVREGAP
CCCCCCHHHHHHHHEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHEECCCC
RADITAAFDTHPQVLAWLEAHELHGDDGTILLRRTVDAAGRSKAFINGAAVTLAQLREVG
CCCEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
EQLVDIHGQHAHQLLLKTDAQRRLLDAHAGLEDEVRAVGERYRAWQAVVRLREAAEQQSR
HHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAQLERERVEWQVSELQKLAPQPGEWEEVQAEHHRLSHAASLIEGTRAALDTLSEADSAV
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTQLGAAVHGLQALAEIDPALADVLAALEPAQVQVQEAVHSLARYADRAELDPDRLAEVD
HHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
ARLQALHTMARKYRVAPETLPAELTQRQAQLAALQAASDLDALQAQEAQTHAAYLQAAQA
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSRGRAKAARELADAVTGAMQGLSMAGGRFEIALHPLEPGGAAGLEQVEFLVAGHAGVSP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCC
RPLAKVASGGELARISLAISVIASEASPTPTLIFDEVDSGIGGAVAEVVGRRLRELGTRR
CHHHHHCCCCCEEHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCC
QVLCVTHLPQVAALANHHVQVAKQTVDGSTRSDLVVLDATGRVDEIARMLGGASLTDTTR
EEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCHHHH
RHADEMLAAGRAHPAPAPAGQRKSRRAVQ
HHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLHSLTIRDFVIVHALDLDLADGFTVFTGETGAGKSILIDALALTLGERADATVVREGAP
CCCCCCHHHHHHHHEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHEECCCC
RADITAAFDTHPQVLAWLEAHELHGDDGTILLRRTVDAAGRSKAFINGAAVTLAQLREVG
CCCEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
EQLVDIHGQHAHQLLLKTDAQRRLLDAHAGLEDEVRAVGERYRAWQAVVRLREAAEQQSR
HHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAQLERERVEWQVSELQKLAPQPGEWEEVQAEHHRLSHAASLIEGTRAALDTLSEADSAV
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTQLGAAVHGLQALAEIDPALADVLAALEPAQVQVQEAVHSLARYADRAELDPDRLAEVD
HHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
ARLQALHTMARKYRVAPETLPAELTQRQAQLAALQAASDLDALQAQEAQTHAAYLQAAQA
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSRGRAKAARELADAVTGAMQGLSMAGGRFEIALHPLEPGGAAGLEQVEFLVAGHAGVSP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCC
RPLAKVASGGELARISLAISVIASEASPTPTLIFDEVDSGIGGAVAEVVGRRLRELGTRR
CHHHHHCCCCCEEHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCC
QVLCVTHLPQVAALANHHVQVAKQTVDGSTRSDLVVLDATGRVDEIARMLGGASLTDTTR
EEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCHHHH
RHADEMLAAGRAHPAPAPAGQRKSRRAVQ
HHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3037486; 9205837; 9278503 [H]