Definition | Ralstonia solanacearum GMI1000, complete genome. |
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Accession | NC_003295 |
Length | 3,716,413 |
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The map label for this gene is ppnK
Identifier: 17547369
GI number: 17547369
Start: 2851770
End: 2852678
Strand: Direct
Name: ppnK
Synonym: RSc2650
Alternate gene names: 17547369
Gene position: 2851770-2852678 (Clockwise)
Preceding gene: 17547367
Following gene: 17547370
Centisome position: 76.73
GC content: 68.21
Gene sequence:
>909_bases GTGACTTCCCGCGCGAACGCCACTTCGCCCTTCAAGACCGTCGCGCTGGTCGGCCGCTATTCGGCCGCCAATATCGCCGC TCCGCTGCTGGAACTGGCGTCGTGCATCGCCGCGCGCGGCCACGATATCGTCTTCGAACGGGAAACCGCCCTGAACATCG GGGTCCAGGACTACCCCGCCCTGCCGCCCGACGAGATGGCGCGCCATGCCGACGTGGCCGTGGTGCTGGGCGGCGACGGA ACGCTGCTCGGCATCGGGCGCCACCTGGCCGGCGCGTCGGTGCCGGTCATCGGGGTCAACCACGGCCGGCTCGGCTTCAT GACGGACATCCCGTTCGAAGACGTGCACAACGTGCTGCCCGACATGCTGGCCGGCCAGTACGAAGCCGAAACCCGCTCGC TGCTGCAGGCCCAAGTGGTGCGCGATGACGAGACCATCTTCTCCGCCCTGGCCTTCAACGACGTGGTGGTCAACCGCTCG GGCTTTTCCGGCATGGTCGAGCTGGCCGTCTCGGTGGACGGCTTCTTCATGTACAACCAGCGCTCGGATGGCCTGATCGT GTCCACGCCCACCGGGTCGACGGCCTATGCGCTGTCGGCGGGCGGGCCGATCCTGCACCCGGCGCTGTCGGGCCTGGTGC TGGTGCCGATCGCGCCGCACGCGCTGTCCAACCGGCCCATCGTCATTCCGCACGACGCCGAGGTCGTCATCCAGGTCACC AGCGGGCGCGACGCCAGCGTCAACTTCGACATGCAGTCGCTCACGTCGCTGCTGCCGGGCGACCGCATCGTGGTGCGCCG CTCCGAACGCACCGTGCGGCTGCTGCATCCGGTCGGCTACAACTACTACGCCACGCTGCGCAAGAAGCTGCACTGGCACG AGTACCCGACCGAAGACAACCGGCTGTAA
Upstream 100 bases:
>100_bases CGCCGGGTGGCGACAACGTTCCACCTTCAAACGCGCGCCGGCCATGGCGACCGTCATATCGATATGGTGTAATGCGCGCA TGTCGATCTCCCCATCCGCC
Downstream 100 bases:
>100_bases CGCCAACAACCGATATCGCTCGACGCTCCATGCTGCACAGCCTGACCATCCGCGATTTCGTCATCGTCCATGCCCTGGAC CTCGACCTGGCCGACGGCTT
Product: NAD(+)/NADH kinase family protein
Products: NA
Alternate protein names: Poly(P)/ATP NAD kinase
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MTSRANATSPFKTVALVGRYSAANIAAPLLELASCIAARGHDIVFERETALNIGVQDYPALPPDEMARHADVAVVLGGDG TLLGIGRHLAGASVPVIGVNHGRLGFMTDIPFEDVHNVLPDMLAGQYEAETRSLLQAQVVRDDETIFSALAFNDVVVNRS GFSGMVELAVSVDGFFMYNQRSDGLIVSTPTGSTAYALSAGGPILHPALSGLVLVPIAPHALSNRPIVIPHDAEVVIQVT SGRDASVNFDMQSLTSLLPGDRIVVRRSERTVRLLHPVGYNYYATLRKKLHWHEYPTEDNRL
Sequences:
>Translated_302_residues MTSRANATSPFKTVALVGRYSAANIAAPLLELASCIAARGHDIVFERETALNIGVQDYPALPPDEMARHADVAVVLGGDG TLLGIGRHLAGASVPVIGVNHGRLGFMTDIPFEDVHNVLPDMLAGQYEAETRSLLQAQVVRDDETIFSALAFNDVVVNRS GFSGMVELAVSVDGFFMYNQRSDGLIVSTPTGSTAYALSAGGPILHPALSGLVLVPIAPHALSNRPIVIPHDAEVVIQVT SGRDASVNFDMQSLTSLLPGDRIVVRRSERTVRLLHPVGYNYYATLRKKLHWHEYPTEDNRL >Mature_301_residues TSRANATSPFKTVALVGRYSAANIAAPLLELASCIAARGHDIVFERETALNIGVQDYPALPPDEMARHADVAVVLGGDGT LLGIGRHLAGASVPVIGVNHGRLGFMTDIPFEDVHNVLPDMLAGQYEAETRSLLQAQVVRDDETIFSALAFNDVVVNRSG FSGMVELAVSVDGFFMYNQRSDGLIVSTPTGSTAYALSAGGPILHPALSGLVLVPIAPHALSNRPIVIPHDAEVVIQVTS GRDASVNFDMQSLTSLLPGDRIVVRRSERTVRLLHPVGYNYYATLRKKLHWHEYPTEDNRL
Specific function: Catalyzes the phosphorylation of NAD to NADP. Utilizes ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus
COG id: COG0061
COG function: function code G; Predicted sugar kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAD kinase family
Homologues:
Organism=Homo sapiens, GI55743112, Length=330, Percent_Identity=26.969696969697, Blast_Score=105, Evalue=7e-23, Organism=Escherichia coli, GI1788968, Length=285, Percent_Identity=39.2982456140351, Blast_Score=211, Evalue=4e-56, Organism=Saccharomyces cerevisiae, GI6320794, Length=241, Percent_Identity=29.8755186721992, Blast_Score=123, Evalue=3e-29, Organism=Saccharomyces cerevisiae, GI6322509, Length=242, Percent_Identity=31.8181818181818, Blast_Score=116, Evalue=5e-27, Organism=Saccharomyces cerevisiae, GI6325068, Length=182, Percent_Identity=31.8681318681319, Blast_Score=112, Evalue=5e-26, Organism=Drosophila melanogaster, GI28573832, Length=334, Percent_Identity=29.3413173652695, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI28573826, Length=334, Percent_Identity=29.3413173652695, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI161077047, Length=334, Percent_Identity=29.3413173652695, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI28573830, Length=334, Percent_Identity=29.3413173652695, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI28573828, Length=328, Percent_Identity=29.5731707317073, Blast_Score=105, Evalue=4e-23, Organism=Drosophila melanogaster, GI20129957, Length=283, Percent_Identity=28.2685512367491, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI281363323, Length=283, Percent_Identity=28.2685512367491, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI281363321, Length=283, Percent_Identity=28.2685512367491, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI24653422, Length=283, Percent_Identity=28.2685512367491, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI24653424, Length=283, Percent_Identity=28.2685512367491, Blast_Score=88, Evalue=6e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PPNK_RALSO (Q8XW25)
Other databases:
- EMBL: AL646052 - RefSeq: NP_520771.1 - ProteinModelPortal: Q8XW25 - SMR: Q8XW25 - GeneID: 1221497 - GenomeReviews: AL646052_GR - KEGG: rso:RSc2650 - NMPDR: fig|267608.1.peg.2650 - HOGENOM: HBG713904 - OMA: FESFMID - ProtClustDB: PRK02155 - BioCyc: RSOL267608:RSC2650-MONOMER - BRENDA: 2.7.1.23 - GO: GO:0005737 - HAMAP: MF_00361 - InterPro: IPR016064 - InterPro: IPR017438 - InterPro: IPR017437 - InterPro: IPR002504 - Gene3D: G3DSA:2.60.200.30 - Gene3D: G3DSA:3.40.50.10330 - PANTHER: PTHR20275
Pfam domain/function: PF01513 NAD_kinase; SSF111331 ATP-NAD_kinase_PpnK-typ
EC number: =2.7.1.23
Molecular weight: Translated: 32528; Mature: 32397
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSRANATSPFKTVALVGRYSAANIAAPLLELASCIAARGHDIVFERETALNIGVQDYPA CCCCCCCCCCHHEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCEEECCCCCCCC LPPDEMARHADVAVVLGGDGTLLGIGRHLAGASVPVIGVNHGRLGFMTDIPFEDVHNVLP CCHHHHHCCCCEEEEECCCCEEEEECHHHCCCCCCEEECCCCCEEEEECCCHHHHHHHHH DMLAGQYEAETRSLLQAQVVRDDETIFSALAFNDVVVNRSGFSGMVELAVSVDGFFMYNQ HHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCEEEEECCCCCCEEEEEEEECEEEEEEC RSDGLIVSTPTGSTAYALSAGGPILHPALSGLVLVPIAPHALSNRPIVIPHDAEVVIQVT CCCCEEEECCCCCEEEEEECCCCCHHHHHCCEEEEEECCHHCCCCCEEEECCCEEEEEEE SGRDASVNFDMQSLTSLLPGDRIVVRRSERTVRLLHPVGYNYYATLRKKLHWHEYPTEDN CCCCCEEEECHHHHHHHCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCC RL CC >Mature Secondary Structure TSRANATSPFKTVALVGRYSAANIAAPLLELASCIAARGHDIVFERETALNIGVQDYPA CCCCCCCCCHHEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCEEECCCCCCCC LPPDEMARHADVAVVLGGDGTLLGIGRHLAGASVPVIGVNHGRLGFMTDIPFEDVHNVLP CCHHHHHCCCCEEEEECCCCEEEEECHHHCCCCCCEEECCCCCEEEEECCCHHHHHHHHH DMLAGQYEAETRSLLQAQVVRDDETIFSALAFNDVVVNRSGFSGMVELAVSVDGFFMYNQ HHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCEEEEECCCCCCEEEEEEEECEEEEEEC RSDGLIVSTPTGSTAYALSAGGPILHPALSGLVLVPIAPHALSNRPIVIPHDAEVVIQVT CCCCEEEECCCCCEEEEEECCCCCHHHHHCCEEEEEECCHHCCCCCEEEECCCEEEEEEE SGRDASVNFDMQSLTSLLPGDRIVVRRSERTVRLLHPVGYNYYATLRKKLHWHEYPTEDN CCCCCEEEECHHHHHHHCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCC RL CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852