Definition | Ralstonia solanacearum GMI1000, complete genome. |
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Accession | NC_003295 |
Length | 3,716,413 |
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The map label for this gene is pcaD [H]
Identifier: 17546969
GI number: 17546969
Start: 2442420
End: 2443232
Strand: Reverse
Name: pcaD [H]
Synonym: RSc2250
Alternate gene names: 17546969
Gene position: 2443232-2442420 (Counterclockwise)
Preceding gene: 17546970
Following gene: 17546968
Centisome position: 65.74
GC content: 71.09
Gene sequence:
>813_bases ATGCCCTGGCTTGAACACGACAACGTCCGCCTCTACCACGAATTCGACGATGGCCCTGCCCCGGCCAAGCCGGTGCTGGT GCTGTCCAACTCGCTCGGCACCGATCTCGGCATGTGGGCGCCGCAGCTGGAGGCGCTGCGCCGGCATTTCCGGCTGCTGC GCTACGACACCCGCGGCCACGGCCGGTCGAGCGTGCCCGACGCGCCGTTCGGCGTGGCGCAGCTCGGCGGCGACGTGCTG GCGCTGCTCGACCACTACGACATTGAATTCGCGCTGTTCTGCGGCCTGTCGATGGGCGGCGTGACCGGCCTGTGGCTCGC CGCGCATCACGGCGAGCGCTTTCCGCGCATGGTGGTCAGCAACACCGCCGCGCAGATCGGCACCCAGCAGAGCTGGAACG CCCGCATCGCGCAGGTGGAGCAGCGCGGCATGGGTGCCATTACCGAAACGGTGCTCGAGCGCTGGTTCACCGATGGCTAC CGCGTCGCCGCGCCGGCGCGCGTCGACCTCGTCAAGGCGATGCTGCTGGCGACGCCGCCGGCCGGCTACAACGGCAATTG CGCCGCCATCCGCGACGCCGACCTGCGCGCGCAGCTCGAGGCCATCCGCGTGCCGCTGCTCGCCATCGGCGGCACGCACG ACATCTCGACGCCGGCCGCGCAGACCCGGGCGATCGCGCAGGGCGTGCCCGGCGCGCAATACGTGGAGCTGTCCGCCGGC CATCTCGCCAACTGGGAGCAGGCCGAGGCCTATACCGATGTGCTGGTCGGCTTCCTGACCACCGGCGTCGCGCGCGAGGC CGTCCATGGATGA
Upstream 100 bases:
>100_bases GATCCCGCCCACTACCTCGGCGACGCGGCGGCCGCCGTCGACCGCGTGCTGGCGGAACACGACCGTCGCCGCGCCTGAAC CCGACTCCCACGGAGACACC
Downstream 100 bases:
>100_bases GCGCGATCGCCACCACGCCGGCATGCAGGTCAGGCGCGCCGTGCTGGGCGACGCTCACGTCGACCGTGCCACCGCCGCGC AGACCGAACTGACCGCGCCG
Product: B-ketoadipate enol-lactone hydrolase transmembrane protein
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase II; Beta-ketoadipate enol-lactone hydrolase II; Enol-lactone hydrolase II [H]
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MPWLEHDNVRLYHEFDDGPAPAKPVLVLSNSLGTDLGMWAPQLEALRRHFRLLRYDTRGHGRSSVPDAPFGVAQLGGDVL ALLDHYDIEFALFCGLSMGGVTGLWLAAHHGERFPRMVVSNTAAQIGTQQSWNARIAQVEQRGMGAITETVLERWFTDGY RVAAPARVDLVKAMLLATPPAGYNGNCAAIRDADLRAQLEAIRVPLLAIGGTHDISTPAAQTRAIAQGVPGAQYVELSAG HLANWEQAEAYTDVLVGFLTTGVAREAVHG
Sequences:
>Translated_270_residues MPWLEHDNVRLYHEFDDGPAPAKPVLVLSNSLGTDLGMWAPQLEALRRHFRLLRYDTRGHGRSSVPDAPFGVAQLGGDVL ALLDHYDIEFALFCGLSMGGVTGLWLAAHHGERFPRMVVSNTAAQIGTQQSWNARIAQVEQRGMGAITETVLERWFTDGY RVAAPARVDLVKAMLLATPPAGYNGNCAAIRDADLRAQLEAIRVPLLAIGGTHDISTPAAQTRAIAQGVPGAQYVELSAG HLANWEQAEAYTDVLVGFLTTGVAREAVHG >Mature_269_residues PWLEHDNVRLYHEFDDGPAPAKPVLVLSNSLGTDLGMWAPQLEALRRHFRLLRYDTRGHGRSSVPDAPFGVAQLGGDVLA LLDHYDIEFALFCGLSMGGVTGLWLAAHHGERFPRMVVSNTAAQIGTQQSWNARIAQVEQRGMGAITETVLERWFTDGYR VAAPARVDLVKAMLLATPPAGYNGNCAAIRDADLRAQLEAIRVPLLAIGGTHDISTPAAQTRAIAQGVPGAQYVELSAGH LANWEQAEAYTDVLVGFLTTGVAREAVHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 29181; Mature: 29050
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPWLEHDNVRLYHEFDDGPAPAKPVLVLSNSLGTDLGMWAPQLEALRRHFRLLRYDTRGH CCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCHHCCCHHHHHHHHHHHHHHCCCCCC GRSSVPDAPFGVAQLGGDVLALLDHYDIEFALFCGLSMGGVTGLWLAAHHGERFPRMVVS CCCCCCCCCCCHHHHCCHHEEHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCCCCHHHHH NTAAQIGTQQSWNARIAQVEQRGMGAITETVLERWFTDGYRVAAPARVDLVKAMLLATPP HHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCC AGYNGNCAAIRDADLRAQLEAIRVPLLAIGGTHDISTPAAQTRAIAQGVPGAQYVELSAG CCCCCCEEEEECCHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEECCC HLANWEQAEAYTDVLVGFLTTGVAREAVHG CCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PWLEHDNVRLYHEFDDGPAPAKPVLVLSNSLGTDLGMWAPQLEALRRHFRLLRYDTRGH CCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCHHCCCHHHHHHHHHHHHHHCCCCCC GRSSVPDAPFGVAQLGGDVLALLDHYDIEFALFCGLSMGGVTGLWLAAHHGERFPRMVVS CCCCCCCCCCCHHHHCCHHEEHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCCCCHHHHH NTAAQIGTQQSWNARIAQVEQRGMGAITETVLERWFTDGYRVAAPARVDLVKAMLLATPP HHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCC AGYNGNCAAIRDADLRAQLEAIRVPLLAIGGTHDISTPAAQTRAIAQGVPGAQYVELSAG CCCCCCEEEEECCHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEECCC HLANWEQAEAYTDVLVGFLTTGVAREAVHG CCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8125318; 670169 [H]