| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is phnU [H]
Identifier: 17546511
GI number: 17546511
Start: 1927454
End: 1928302
Strand: Direct
Name: phnU [H]
Synonym: RSc1792
Alternate gene names: 17546511
Gene position: 1927454-1928302 (Clockwise)
Preceding gene: 17546510
Following gene: 17546512
Centisome position: 51.86
GC content: 72.67
Gene sequence:
>849_bases ATGGCCGCCGCCGCACGCTCGCTGCCGGACGACGCCGTGCTGCCCGCGCGGTGGCGGGCGGCGCTGCTCGCGCCCGCCGT CGCGCTGTTCTGCGCCTTCTGGCTGCTGCCGATGGCGGCGCTGCTGCGCGTGAGCGGCAGCGAGGGGCTGCTGGCCACCT ACACCGCCGCGCTGACCACGCCGCGCTACCTGGGCAGCCTGGTCTCGACGGTGGTGCTGTCGGCGGCGGTGACGCTGGCG ACGCTGGTGCTGTCGAGCGTCGCCGGGCTGTTCCTGGTGCGCCACGCGGTGCCGGGCAAGCGGCTGATCACGGCCATGCT GACCTTTCCGCTGGCGTTTCCCGGCGTGGTGGTGGGCTTCATGGTGATCCTGCTGGCCGGGCGCCAGGGCCTGCTGGGCG ACCTGACGCTGCGGCTGGCCGGCGAGAAATGGGTGTTCGCCTATTCGATCGGCGGGCTGTTTCTCGGCTACCTGTATTTC TCCATCCCGCGCGTGGTGCTGACGGTGATGGCGGCGGCGGAAAAGCTCGACCGCTCGCTGGAGGAGGCGGCACGCTCGCT GGGCGCGTCGTCGTGGCAGGTGACGCGCGACGTGCTGGTGCCGGGGCTGGCGCCCGCGCTGATCGCCTCCGGCGCGATCT GCTTCGCCACCTCGATGGGGGCGTTCGGCACCGCCTTCACGCTCGCCACCGACATCGACGTGCTGCCGATGACGATCTAC ACCGAATTCACCCTCAACGCCGGCATGGCCATGGCGGCGGCGCTGTCGGTGGTGCTGGGCGCGGTGACGTGGCTGGTACT GGCGGCGGCCCGCGTGGCCAGCGGCGGGCAGGCGGGAGCCGCGGCATGA
Upstream 100 bases:
>100_bases CGGCCAGCGAGTACGCCCGCGTGAAGACGGTCGACTTCAACCAGATGGCGGCGCGCCAGCAGGCCTTCGGCACGCGCTAC CTGGACGAGGTGCGCTGAGC
Downstream 100 bases:
>100_bases AGCGCCTGCTGCCGATGGCGCAGTGGCTGGTGACGCTGCTGCTGTGCCTGTTCCTGATCGTGCCGGTGGCGCTGTCGATG GCCGTGGGGCTGACGCGCAA
Product: transport system permease transmembrane ABC transporter protein
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MAAAARSLPDDAVLPARWRAALLAPAVALFCAFWLLPMAALLRVSGSEGLLATYTAALTTPRYLGSLVSTVVLSAAVTLA TLVLSSVAGLFLVRHAVPGKRLITAMLTFPLAFPGVVVGFMVILLAGRQGLLGDLTLRLAGEKWVFAYSIGGLFLGYLYF SIPRVVLTVMAAAEKLDRSLEEAARSLGASSWQVTRDVLVPGLAPALIASGAICFATSMGAFGTAFTLATDIDVLPMTIY TEFTLNAGMAMAAALSVVLGAVTWLVLAAARVASGGQAGAAA
Sequences:
>Translated_282_residues MAAAARSLPDDAVLPARWRAALLAPAVALFCAFWLLPMAALLRVSGSEGLLATYTAALTTPRYLGSLVSTVVLSAAVTLA TLVLSSVAGLFLVRHAVPGKRLITAMLTFPLAFPGVVVGFMVILLAGRQGLLGDLTLRLAGEKWVFAYSIGGLFLGYLYF SIPRVVLTVMAAAEKLDRSLEEAARSLGASSWQVTRDVLVPGLAPALIASGAICFATSMGAFGTAFTLATDIDVLPMTIY TEFTLNAGMAMAAALSVVLGAVTWLVLAAARVASGGQAGAAA >Mature_281_residues AAAARSLPDDAVLPARWRAALLAPAVALFCAFWLLPMAALLRVSGSEGLLATYTAALTTPRYLGSLVSTVVLSAAVTLAT LVLSSVAGLFLVRHAVPGKRLITAMLTFPLAFPGVVVGFMVILLAGRQGLLGDLTLRLAGEKWVFAYSIGGLFLGYLYFS IPRVVLTVMAAAEKLDRSLEEAARSLGASSWQVTRDVLVPGLAPALIASGAICFATSMGAFGTAFTLATDIDVLPMTIYT EFTLNAGMAMAAALSVVLGAVTWLVLAAARVASGGQAGAAA
Specific function: Probably part of the phnSTUV complex (TC 3.A.1.11.5) involved in 2-aminoethylphosphonate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0555
COG function: function code O; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=211, Percent_Identity=30.3317535545024, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1786980, Length=205, Percent_Identity=34.1463414634146, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI87082099, Length=210, Percent_Identity=28.5714285714286, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017636 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 29049; Mature: 28918
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAAARSLPDDAVLPARWRAALLAPAVALFCAFWLLPMAALLRVSGSEGLLATYTAALTT CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC PRYLGSLVSTVVLSAAVTLATLVLSSVAGLFLVRHAVPGKRLITAMLTFPLAFPGVVVGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH MVILLAGRQGLLGDLTLRLAGEKWVFAYSIGGLFLGYLYFSIPRVVLTVMAAAEKLDRSL HHHHHHCCCCCHHHHHHEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEAARSLGASSWQVTRDVLVPGLAPALIASGAICFATSMGAFGTAFTLATDIDVLPMTIY HHHHHHCCCCCHHHHHHHHCCCHHHHHHHCCHHHHHHHCCCHHHHHHHHHCCCHHHHHHH TEFTLNAGMAMAAALSVVLGAVTWLVLAAARVASGGQAGAAA HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AAAARSLPDDAVLPARWRAALLAPAVALFCAFWLLPMAALLRVSGSEGLLATYTAALTT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC PRYLGSLVSTVVLSAAVTLATLVLSSVAGLFLVRHAVPGKRLITAMLTFPLAFPGVVVGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH MVILLAGRQGLLGDLTLRLAGEKWVFAYSIGGLFLGYLYFSIPRVVLTVMAAAEKLDRSL HHHHHHCCCCCHHHHHHEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEAARSLGASSWQVTRDVLVPGLAPALIASGAICFATSMGAFGTAFTLATDIDVLPMTIY HHHHHHCCCCCHHHHHHHHCCCHHHHHHHCCHHHHHHHCCCHHHHHHHHHCCCHHHHHHH TEFTLNAGMAMAAALSVVLGAVTWLVLAAARVASGGQAGAAA HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA