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The map label for this gene is potF [C]

Identifier: 17546510

GI number: 17546510

Start: 1926420

End: 1927451

Strand: Direct

Name: potF [C]

Synonym: RSc1791

Alternate gene names: 17546510

Gene position: 1926420-1927451 (Clockwise)

Preceding gene: 17546509

Following gene: 17546511

Centisome position: 51.84

GC content: 67.73

Gene sequence:

>1032_bases
ATGAAACGTCTGATCCATTGGCTGCGCGCATGCGGCCTCGTTGCCGCCGGCGCCTTGGCCATGGCGGCGCCGCTGCATGC
CCAACCCGCGGGCCAGCAGGTCGCCATCTGCTACAACTGCCCGCCGGAATGGGCCGACTGGGCCGGCCAGATCCAGGCCA
TCAAGAACCGGACCGGCATCGCCGTGCCGTTCGACAACAAGAACTCCGGCCAGGCCATCGCGCAGATGCTGGCCGAGAAG
GGGCACCCGGTGGCCGACGTGGCCTACCTGGGCATCACCTCGGCCTACCAGGCCAAGGAGAAGGGCCTGGTCGCCGGCTA
CAAGCCCAAGCACTGGGACGACATCCCGGCCGGCATGAAGGACCCGGATGGCGCGTTCTTCTCGATCCACTCCGGCACGC
TGGGCTTCTTCGTCAACAAGGACGCGCTGGAAGGCAAGCCTGTGCCGCGCTCGTGGAAGGACCTGCTCAAGCCCGAGTAC
AAGGGCATGGTCGGCTACCTCGACCCGAGCAGCGCCTTCGTCGGCTATGTCGGCGCCGTGGCGGTCAACCAGGCGCTGGG
CGGCACGCTCGACAACTTCGGCCCGGGCATCGACTGGTTCAAGCAGCTCAAGAAGAACGCGCCGATCGTGCCCAAGCAGA
CCGCCTACGCGCGCGTGGTGGCCGGCGAGATCCCGATCCTGCTCGACTACGACTTCAACGCCTACCGCGCCAAGTACAAG
GACCACGCCAACGTGGAGTTCGTGATCCCGCAGGAGGGCTCGATCGCGGTGCCGTACGTGATGAGCCTGGTGGCCGGCGC
GCCGCATGCGGACAATGCGAAGAAGGTGCTCGACTTCGTGCTCTCCGATGAAGGCCAGGCGCTGTGGGCCAACGCCTACC
TGCGCCCGGTGCGCGCCGGCGCGATGTCGAAGGAGGCCGCCGCGCGCTTCCTGCCGGCCAGCGAGTACGCCCGCGTGAAG
ACGGTCGACTTCAACCAGATGGCGGCGCGCCAGCAGGCCTTCGGCACGCGCTACCTGGACGAGGTGCGCTGA

Upstream 100 bases:

>100_bases
TGCCCGGCGGCACGCTGGCCGAGGCGCCCGCCACGTCGGCCGATCCAGATTCCGATTCCACCGGTTTTTTCCCCACGTCT
GATACGCAAGGAGCGTCTCG

Downstream 100 bases:

>100_bases
GCATGGCCGCCGCCGCACGCTCGCTGCCGGACGACGCCGTGCTGCCCGCGCGGTGGCGGGCGGCGCTGCTCGCGCCCGCC
GTCGCGCTGTTCTGCGCCTT

Product: solute-binding periplasmic (PBP) ABC transporter protein

Products: ADP; phosphate; putrescine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MKRLIHWLRACGLVAAGALAMAAPLHAQPAGQQVAICYNCPPEWADWAGQIQAIKNRTGIAVPFDNKNSGQAIAQMLAEK
GHPVADVAYLGITSAYQAKEKGLVAGYKPKHWDDIPAGMKDPDGAFFSIHSGTLGFFVNKDALEGKPVPRSWKDLLKPEY
KGMVGYLDPSSAFVGYVGAVAVNQALGGTLDNFGPGIDWFKQLKKNAPIVPKQTAYARVVAGEIPILLDYDFNAYRAKYK
DHANVEFVIPQEGSIAVPYVMSLVAGAPHADNAKKVLDFVLSDEGQALWANAYLRPVRAGAMSKEAAARFLPASEYARVK
TVDFNQMAARQQAFGTRYLDEVR

Sequences:

>Translated_343_residues
MKRLIHWLRACGLVAAGALAMAAPLHAQPAGQQVAICYNCPPEWADWAGQIQAIKNRTGIAVPFDNKNSGQAIAQMLAEK
GHPVADVAYLGITSAYQAKEKGLVAGYKPKHWDDIPAGMKDPDGAFFSIHSGTLGFFVNKDALEGKPVPRSWKDLLKPEY
KGMVGYLDPSSAFVGYVGAVAVNQALGGTLDNFGPGIDWFKQLKKNAPIVPKQTAYARVVAGEIPILLDYDFNAYRAKYK
DHANVEFVIPQEGSIAVPYVMSLVAGAPHADNAKKVLDFVLSDEGQALWANAYLRPVRAGAMSKEAAARFLPASEYARVK
TVDFNQMAARQQAFGTRYLDEVR
>Mature_343_residues
MKRLIHWLRACGLVAAGALAMAAPLHAQPAGQQVAICYNCPPEWADWAGQIQAIKNRTGIAVPFDNKNSGQAIAQMLAEK
GHPVADVAYLGITSAYQAKEKGLVAGYKPKHWDDIPAGMKDPDGAFFSIHSGTLGFFVNKDALEGKPVPRSWKDLLKPEY
KGMVGYLDPSSAFVGYVGAVAVNQALGGTLDNFGPGIDWFKQLKKNAPIVPKQTAYARVVAGEIPILLDYDFNAYRAKYK
DHANVEFVIPQEGSIAVPYVMSLVAGAPHADNAKKVLDFVLSDEGQALWANAYLRPVRAGAMSKEAAARFLPASEYARVK
TVDFNQMAARQQAFGTRYLDEVR

Specific function: Required For The Activity Of The Bacterial Periplasmic Transport System Of Putrescine. Polyamine Binding Protein. [C]

COG id: COG1840

COG function: function code P; ABC-type Fe3+ transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 37225; Mature: 37225

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLIHWLRACGLVAAGALAMAAPLHAQPAGQQVAICYNCPPEWADWAGQIQAIKNRTGI
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCE
AVPFDNKNSGQAIAQMLAEKGHPVADVAYLGITSAYQAKEKGLVAGYKPKHWDDIPAGMK
EEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCC
DPDGAFFSIHSGTLGFFVNKDALEGKPVPRSWKDLLKPEYKGMVGYLDPSSAFVGYVGAV
CCCCCEEEEECCEEEEEEECCCCCCCCCCHHHHHHCCHHHCCEEEEECCCHHHHHHHHHH
AVNQALGGTLDNFGPGIDWFKQLKKNAPIVPKQTAYARVVAGEIPILLDYDFNAYRAKYK
HHHHHHCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHHEEEECCCCEEEECCCHHHHHHCC
DHANVEFVIPQEGSIAVPYVMSLVAGAPHADNAKKVLDFVLSDEGQALWANAYLRPVRAG
CCCCEEEEECCCCCEEHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHC
AMSKEAAARFLPASEYARVKTVDFNQMAARQQAFGTRYLDEVR
CCCHHHHHHCCCCHHCCEEEEECHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRLIHWLRACGLVAAGALAMAAPLHAQPAGQQVAICYNCPPEWADWAGQIQAIKNRTGI
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCE
AVPFDNKNSGQAIAQMLAEKGHPVADVAYLGITSAYQAKEKGLVAGYKPKHWDDIPAGMK
EEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCC
DPDGAFFSIHSGTLGFFVNKDALEGKPVPRSWKDLLKPEYKGMVGYLDPSSAFVGYVGAV
CCCCCEEEEECCEEEEEEECCCCCCCCCCHHHHHHCCHHHCCEEEEECCCHHHHHHHHHH
AVNQALGGTLDNFGPGIDWFKQLKKNAPIVPKQTAYARVVAGEIPILLDYDFNAYRAKYK
HHHHHHCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHHEEEECCCCEEEECCCHHHHHHCC
DHANVEFVIPQEGSIAVPYVMSLVAGAPHADNAKKVLDFVLSDEGQALWANAYLRPVRAG
CCCCEEEEECCCCCEEHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHC
AMSKEAAARFLPASEYARVKTVDFNQMAARQQAFGTRYLDEVR
CCCHHHHHHCCCCHHCCEEEEECHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; putrescine [Periplasm]; H2O [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] [C]

General reaction: Polyamine Binding Protein [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]