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The map label for this gene is yoaA [C]

Identifier: 17546345

GI number: 17546345

Start: 1745815

End: 1747956

Strand: Direct

Name: yoaA [C]

Synonym: RSc1626

Alternate gene names: 17546345

Gene position: 1745815-1747956 (Clockwise)

Preceding gene: 17546344

Following gene: 17546347

Centisome position: 46.98

GC content: 68.95

Gene sequence:

>2142_bases
TTGACTTCGCTTTCCCCACTCGCCGAGCCGTCGGCCGATGCCGGCAATGGCGATGCCGCCGCGCTTCCCGACGCGCCGCC
CACCGACCTCCACCATGCCGAACTGGCGACGCTGTTCGCCGATGACGGCACGCTGGCGCAGGGCATCGAGTCGTACCGGC
CGCGGACATCGCAGCTGACGATGGCGCAGGCGGTGGCGAATGCCATCGAGGCGGCGGATTCGCTGATCGTCGAGGCGGGT
ACCGGCACGGGCAAGACCTACGCCTACCTCGTTCCGGCGATGCTGTGGGGCGGCAAGGTGATCCTGTCCACCGGGACCAA
GAACCTGCAGGACCAGCTGTTCCTGCGCGATATCCCGACCGTGCGCAAGGCCCTGAATGCACCGGTGTCGGTGGCGCTGC
TGAAGGGGCGGGCCAACTACGTCTGCCATTACCACCTGGAGCGCACGTCGCAGAACGGGCGGCTGTCGTCGCGGCAGGAC
GCGGCGTGGCTGCGCGAGATCAACCGCTTCCTCAAGACCACCAAGACGGGCGACAAGGCCGAGCTTTCCGCCGTGCCCGA
GAACGCGCCGGTGTGGAACCTGGTCACGTCCACGCGCGACAACTGCCTCGGTTCGGAGTGCGCGTACTACAAGGACTGCT
TCGTCATGCGCGCCCGCAAGGAGGCGCAGCAGGCCGACATGGTGGTCGTCAATCACCACCTGTTCTTCGCCGATGTCATG
CTCAAGGACACCGGCATGGCCGAGCTGCTGCCGGCCGCGAACACCGTCATCTTCGACGAAGCGCATCAGCTGCCCGAGAC
CGCGACGCTGTTCTTCGGCGAGACGATCTCCACCAACCAGTTGCTGGAACTGGCGCGGGACAGCGTGGCCGAGGGGCTGT
CGCATGCGCGCGATGCGGTGGACTGGGTGGCCATCGCCGCGCCGCTCGAGCGCGCCGCGCGCGACCTGCGCCTGGTATTC
CGCCAGGACGGCGCGCGCCTGTCGATGAAGCAGATCGATAGCGATGCGGCGCTCAGCAAGCCGTTCTACGAAGTCCTGCC
CAAGCTGGAGCAGGCGCTGTCCGATTTTACCGGTGCGCTGGAGGCGCAGGCCGAGCGCGCCGAGACCATCGAGCAATGCC
ATCGCCGCGCGGTGGCGCTGTGCGACAAGCTTGAGGCCTGGGCCGCCCCCAGGCCGGCGCCGGCCGCCAAGGCCGATGGC
GAGGCGGCGCTCGAGGCCGAGGCACCCGTCGATGAGCGGGTGCGCTGGGTCGAAGTCTTCGCCAATGCCGTGCAGCTGCA
CCTGACGCCGCTGTCGATCGCGCCGATCTTCTCGCGCCAGCGGGCCGGGCAGCCGCGCGCCTGGATCTTCACGTCGGCGA
CGCTTTCCGTGCGCGGGAATTTCACGCACTACGCCGCGCAGCTGGGCCTCGACCGTGACCGCTCGATGACGCTCGACAGT
CCCTTCGACTACGCATCGCAGGGGTTGCTGTACGTGCCGCGCGATCTGCCGCAGCCGAGCGATCCGCGCTTCACCGATGC
GGTGCTCGACGCCGCCCTGCCGATGATCGAAGCGGCCGGCGGCAAGACCTTCGTGCTGTGCACCACGCTGCGCGCCGTCA
ACCGCGCCGCCGAGCGGCTGACCGACGAGTTCGCGCAGCGCGGCTGGGATTTTCCGCTGCTGGTGCAGGGCCAGGCCAGC
CGCACGGAGCTGCTCGAGCGCTTCCGCGCGCTCGGCAACGCGGTGCTGGTCGGCAGCCAGAGTTTCTGGGAAGGCGTGGA
CGTGCGGGGCGAGGCGCTGTCGCTGGTCGTCATCGACAAGCTGCCGTTCGCGCCGCCCGACGATCCGGTGCTCAGTGCCC
GGATGGAAGCGCTGGAAAAGAAGGGCCTGAGCCCGTTCGCCGTCCATCAGTTGCCGCATGCCGTCATCACGCTCAAGCAG
GGTGCGGGGCGGCTGATCCGCTCCGAGAGCGATCGCGGCGTGCTGATGATCTGCGATCCGCGCCTGGTGGAGAAGTCGTA
TGGGCGGCAGATCTGGCAGAGCCTGCCGCCGTTCAAGCGCACCCGCGAGGCGGACACGGCGGCGGGGTTCCTGCGTTCGC
TGGGTCAGGCTGAATCGGCGGCGTTTCCGGCCGACACCTCCGCGGCCGACACCTCCGCCTGA

Upstream 100 bases:

>100_bases
GAGCCGGACGTGCCCGCCTGAGCGTTGCCCCGATCGCCCGATCCTGGGACGCCGCCGCCACGTGCGGCGTCCGCCATCCG
CCCTCCAGGACGCTTCTTCC

Downstream 100 bases:

>100_bases
CGCCGCGCGCGGGCGAAAAAAAGCCCGGTCAATCGACCGGGCTTCCTGATTGCGCGATGGCGCTGTTCACGCGTGGCTTA
CCACCACTGGTACCACGGCT

Product: ATP-dependent DNA helicase-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 713; Mature: 712

Protein sequence:

>713_residues
MTSLSPLAEPSADAGNGDAAALPDAPPTDLHHAELATLFADDGTLAQGIESYRPRTSQLTMAQAVANAIEAADSLIVEAG
TGTGKTYAYLVPAMLWGGKVILSTGTKNLQDQLFLRDIPTVRKALNAPVSVALLKGRANYVCHYHLERTSQNGRLSSRQD
AAWLREINRFLKTTKTGDKAELSAVPENAPVWNLVTSTRDNCLGSECAYYKDCFVMRARKEAQQADMVVVNHHLFFADVM
LKDTGMAELLPAANTVIFDEAHQLPETATLFFGETISTNQLLELARDSVAEGLSHARDAVDWVAIAAPLERAARDLRLVF
RQDGARLSMKQIDSDAALSKPFYEVLPKLEQALSDFTGALEAQAERAETIEQCHRRAVALCDKLEAWAAPRPAPAAKADG
EAALEAEAPVDERVRWVEVFANAVQLHLTPLSIAPIFSRQRAGQPRAWIFTSATLSVRGNFTHYAAQLGLDRDRSMTLDS
PFDYASQGLLYVPRDLPQPSDPRFTDAVLDAALPMIEAAGGKTFVLCTTLRAVNRAAERLTDEFAQRGWDFPLLVQGQAS
RTELLERFRALGNAVLVGSQSFWEGVDVRGEALSLVVIDKLPFAPPDDPVLSARMEALEKKGLSPFAVHQLPHAVITLKQ
GAGRLIRSESDRGVLMICDPRLVEKSYGRQIWQSLPPFKRTREADTAAGFLRSLGQAESAAFPADTSAADTSA

Sequences:

>Translated_713_residues
MTSLSPLAEPSADAGNGDAAALPDAPPTDLHHAELATLFADDGTLAQGIESYRPRTSQLTMAQAVANAIEAADSLIVEAG
TGTGKTYAYLVPAMLWGGKVILSTGTKNLQDQLFLRDIPTVRKALNAPVSVALLKGRANYVCHYHLERTSQNGRLSSRQD
AAWLREINRFLKTTKTGDKAELSAVPENAPVWNLVTSTRDNCLGSECAYYKDCFVMRARKEAQQADMVVVNHHLFFADVM
LKDTGMAELLPAANTVIFDEAHQLPETATLFFGETISTNQLLELARDSVAEGLSHARDAVDWVAIAAPLERAARDLRLVF
RQDGARLSMKQIDSDAALSKPFYEVLPKLEQALSDFTGALEAQAERAETIEQCHRRAVALCDKLEAWAAPRPAPAAKADG
EAALEAEAPVDERVRWVEVFANAVQLHLTPLSIAPIFSRQRAGQPRAWIFTSATLSVRGNFTHYAAQLGLDRDRSMTLDS
PFDYASQGLLYVPRDLPQPSDPRFTDAVLDAALPMIEAAGGKTFVLCTTLRAVNRAAERLTDEFAQRGWDFPLLVQGQAS
RTELLERFRALGNAVLVGSQSFWEGVDVRGEALSLVVIDKLPFAPPDDPVLSARMEALEKKGLSPFAVHQLPHAVITLKQ
GAGRLIRSESDRGVLMICDPRLVEKSYGRQIWQSLPPFKRTREADTAAGFLRSLGQAESAAFPADTSAADTSA
>Mature_712_residues
TSLSPLAEPSADAGNGDAAALPDAPPTDLHHAELATLFADDGTLAQGIESYRPRTSQLTMAQAVANAIEAADSLIVEAGT
GTGKTYAYLVPAMLWGGKVILSTGTKNLQDQLFLRDIPTVRKALNAPVSVALLKGRANYVCHYHLERTSQNGRLSSRQDA
AWLREINRFLKTTKTGDKAELSAVPENAPVWNLVTSTRDNCLGSECAYYKDCFVMRARKEAQQADMVVVNHHLFFADVML
KDTGMAELLPAANTVIFDEAHQLPETATLFFGETISTNQLLELARDSVAEGLSHARDAVDWVAIAAPLERAARDLRLVFR
QDGARLSMKQIDSDAALSKPFYEVLPKLEQALSDFTGALEAQAERAETIEQCHRRAVALCDKLEAWAAPRPAPAAKADGE
AALEAEAPVDERVRWVEVFANAVQLHLTPLSIAPIFSRQRAGQPRAWIFTSATLSVRGNFTHYAAQLGLDRDRSMTLDSP
FDYASQGLLYVPRDLPQPSDPRFTDAVLDAALPMIEAAGGKTFVLCTTLRAVNRAAERLTDEFAQRGWDFPLLVQGQASR
TELLERFRALGNAVLVGSQSFWEGVDVRGEALSLVVIDKLPFAPPDDPVLSARMEALEKKGLSPFAVHQLPHAVITLKQG
AGRLIRSESDRGVLMICDPRLVEKSYGRQIWQSLPPFKRTREADTAAGFLRSLGQAESAAFPADTSAADTSA

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1788110, Length=653, Percent_Identity=43.9509954058193, Blast_Score=514, Evalue=1e-147,
Organism=Escherichia coli, GI1787018, Length=237, Percent_Identity=37.1308016877637, Blast_Score=125, Evalue=9e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR001650
- InterPro:   IPR006935 [H]

Pfam domain/function: PF04851 ResIII [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 77638; Mature: 77506

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLSPLAEPSADAGNGDAAALPDAPPTDLHHAELATLFADDGTLAQGIESYRPRTSQLT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCHHHHH
MAQAVANAIEAADSLIVEAGTGTGKTYAYLVPAMLWGGKVILSTGTKNLQDQLFLRDIPT
HHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHH
VRKALNAPVSVALLKGRANYVCHYHLERTSQNGRLSSRQDAAWLREINRFLKTTKTGDKA
HHHHHCCCEEEEEEECCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCH
ELSAVPENAPVWNLVTSTRDNCLGSECAYYKDCFVMRARKEAQQADMVVVNHHLFFADVM
HHCCCCCCCCEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHH
LKDTGMAELLPAANTVIFDEAHQLPETATLFFGETISTNQLLELARDSVAEGLSHARDAV
HHCCCHHHHHCCCCEEEEHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
DWVAIAAPLERAARDLRLVFRQDGARLSMKQIDSDAALSKPFYEVLPKLEQALSDFTGAL
HHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHH
EAQAERAETIEQCHRRAVALCDKLEAWAAPRPAPAAKADGEAALEAEAPVDERVRWVEVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHH
ANAVQLHLTPLSIAPIFSRQRAGQPRAWIFTSATLSVRGNFTHYAAQLGLDRDRSMTLDS
HHHHHEEEECHHHHHHHHHHHCCCCCEEEEEEEEEEECCCHHHHHHHHCCCCCCCCCCCC
PFDYASQGLLYVPRDLPQPSDPRFTDAVLDAALPMIEAAGGKTFVLCTTLRAVNRAAERL
CCCHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHH
TDEFAQRGWDFPLLVQGQASRTELLERFRALGNAVLVGSQSFWEGVDVRGEALSLVVIDK
HHHHHHCCCCCCEEEECCCHHHHHHHHHHHCCCEEEECCHHHHCCCCCCCCEEEEEEEEC
LPFAPPDDPVLSARMEALEKKGLSPFAVHQLPHAVITLKQGAGRLIRSESDRGVLMICDP
CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCHHEEEEECCCCHHHCCCCCCCEEEEECC
RLVEKSYGRQIWQSLPPFKRTREADTAAGFLRSLGQAESAAFPADTSAADTSA
HHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
TSLSPLAEPSADAGNGDAAALPDAPPTDLHHAELATLFADDGTLAQGIESYRPRTSQLT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCHHHHH
MAQAVANAIEAADSLIVEAGTGTGKTYAYLVPAMLWGGKVILSTGTKNLQDQLFLRDIPT
HHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHH
VRKALNAPVSVALLKGRANYVCHYHLERTSQNGRLSSRQDAAWLREINRFLKTTKTGDKA
HHHHHCCCEEEEEEECCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCH
ELSAVPENAPVWNLVTSTRDNCLGSECAYYKDCFVMRARKEAQQADMVVVNHHLFFADVM
HHCCCCCCCCEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHH
LKDTGMAELLPAANTVIFDEAHQLPETATLFFGETISTNQLLELARDSVAEGLSHARDAV
HHCCCHHHHHCCCCEEEEHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
DWVAIAAPLERAARDLRLVFRQDGARLSMKQIDSDAALSKPFYEVLPKLEQALSDFTGAL
HHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHH
EAQAERAETIEQCHRRAVALCDKLEAWAAPRPAPAAKADGEAALEAEAPVDERVRWVEVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHH
ANAVQLHLTPLSIAPIFSRQRAGQPRAWIFTSATLSVRGNFTHYAAQLGLDRDRSMTLDS
HHHHHEEEECHHHHHHHHHHHCCCCCEEEEEEEEEEECCCHHHHHHHHCCCCCCCCCCCC
PFDYASQGLLYVPRDLPQPSDPRFTDAVLDAALPMIEAAGGKTFVLCTTLRAVNRAAERL
CCCHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHH
TDEFAQRGWDFPLLVQGQASRTELLERFRALGNAVLVGSQSFWEGVDVRGEALSLVVIDK
HHHHHHCCCCCCEEEECCCHHHHHHHHHHHCCCEEEECCHHHHCCCCCCCCEEEEEEEEC
LPFAPPDDPVLSARMEALEKKGLSPFAVHQLPHAVITLKQGAGRLIRSESDRGVLMICDP
CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCHHEEEEECCCCHHHCCCCCCCEEEEECC
RLVEKSYGRQIWQSLPPFKRTREADTAAGFLRSLGQAESAAFPADTSAADTSA
HHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]