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The map label for this gene is ydeD [C]

Identifier: 17546326

GI number: 17546326

Start: 1727282

End: 1728205

Strand: Direct

Name: ydeD [C]

Synonym: RSc1607

Alternate gene names: 17546326

Gene position: 1727282-1728205 (Clockwise)

Preceding gene: 17546325

Following gene: 17546327

Centisome position: 46.48

GC content: 68.07

Gene sequence:

>924_bases
ATGACCCAAGCGTATTCGGCCGCACGCATGCCGGCCCTTGATTCCCTGTTCGTGGCTGCCATGCCGTGGTTGTTCGTGCT
GATCTGGAGCACGGGTTTTGTCGTGGCCAAGTTCGGCATGCCGTATGCGGAGCCGATCACCTTCCTGTTCCTGCGCTTCG
TTGGCGTGCTGGTGTGCCTGCTGCCGCTGGTGTGGGTCGCGCGCGTGCCGCTGCCGCGTCGCGCCGGCGCGGACGCGGAC
GCGGTCGACTGGCGGACCATCGGCCACCTGGCCGTGGCGGGCGTGCTGATGCAATGGGGCTACCTCGGCGGCGTGTGGGA
GGCGATCAAGCTCGGCATGCCGGCCGGCATGAGCGCGCTGATCGTCGGCATGCAGCCGATCCTGACCGCGCTCTACGTCT
CGATGCGCGGCGAGCGCGTGTCACCGCGCCAATGGCTGGGCTTGCTGTTCGGCATCGCCGGGGTCGGGCTGGTGGTGGCC
AACAAGCTGCACCTGGCGGGCGTCAACGTGACGACGCTGGGCTTCTGCGTGGGGGCGCTGCTGTCGATCACGGCCGGTAC
GCTGTACCAGAAGCGCTTCTGCCCGGTGTTCGACCTGCGGATGGGTGCATGCATCCAGTTCGGCGCGTCGGCGCTGCTGT
GCTTGCCGTTCATGTTCGCCTTCGAGACGCGCGCGGTGCAGTGGACCGGCCCGATGATCGGTGCGCTGGTTTGGTCGGTG
CTGGCTTTGTCGATCGGCGCGATCTCGTTGCTGTTCATGCTGATCCGCCAGGGGGCCGCGACCAAGGTGACTTCGCTGCT
GTACCTGACGCCGCCCACGACCGCCGCGATGGCCTGGGCGCTGTTCGGTGAGCGCTTTCCGCCGCTGGCGGCGCTGGGCA
TGGTGATCGCCGCATGCGGCGTGGCGCTGGTCATCCGCAGATGA

Upstream 100 bases:

>100_bases
TCCACGCACAGACCATTGCGCTGGCGGCCCTGCATGCCGCCCGCTGGGCTGCCGGGGAGGCTGCCACGTCGGTCTCTTCC
TCTTCTTTGCCGCTTTCCGC

Downstream 100 bases:

>100_bases
TCGGCTGGCGTATCCTCGCAGCATTTCCAATGCCGTCCATGACTCGCCCGCCAGCATGAGCATGCCCCGACAGACGCGCG
ACGACTACCGCCATTTCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MTQAYSAARMPALDSLFVAAMPWLFVLIWSTGFVVAKFGMPYAEPITFLFLRFVGVLVCLLPLVWVARVPLPRRAGADAD
AVDWRTIGHLAVAGVLMQWGYLGGVWEAIKLGMPAGMSALIVGMQPILTALYVSMRGERVSPRQWLGLLFGIAGVGLVVA
NKLHLAGVNVTTLGFCVGALLSITAGTLYQKRFCPVFDLRMGACIQFGASALLCLPFMFAFETRAVQWTGPMIGALVWSV
LALSIGAISLLFMLIRQGAATKVTSLLYLTPPTTAAMAWALFGERFPPLAALGMVIAACGVALVIRR

Sequences:

>Translated_307_residues
MTQAYSAARMPALDSLFVAAMPWLFVLIWSTGFVVAKFGMPYAEPITFLFLRFVGVLVCLLPLVWVARVPLPRRAGADAD
AVDWRTIGHLAVAGVLMQWGYLGGVWEAIKLGMPAGMSALIVGMQPILTALYVSMRGERVSPRQWLGLLFGIAGVGLVVA
NKLHLAGVNVTTLGFCVGALLSITAGTLYQKRFCPVFDLRMGACIQFGASALLCLPFMFAFETRAVQWTGPMIGALVWSV
LALSIGAISLLFMLIRQGAATKVTSLLYLTPPTTAAMAWALFGERFPPLAALGMVIAACGVALVIRR
>Mature_306_residues
TQAYSAARMPALDSLFVAAMPWLFVLIWSTGFVVAKFGMPYAEPITFLFLRFVGVLVCLLPLVWVARVPLPRRAGADADA
VDWRTIGHLAVAGVLMQWGYLGGVWEAIKLGMPAGMSALIVGMQPILTALYVSMRGERVSPRQWLGLLFGIAGVGLVVAN
KLHLAGVNVTTLGFCVGALLSITAGTLYQKRFCPVFDLRMGACIQFGASALLCLPFMFAFETRAVQWTGPMIGALVWSVL
ALSIGAISLLFMLIRQGAATKVTSLLYLTPPTTAAMAWALFGERFPPLAALGMVIAACGVALVIRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32928; Mature: 32797

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQAYSAARMPALDSLFVAAMPWLFVLIWSTGFVVAKFGMPYAEPITFLFLRFVGVLVCL
CCCCCCHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LPLVWVARVPLPRRAGADADAVDWRTIGHLAVAGVLMQWGYLGGVWEAIKLGMPAGMSAL
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
IVGMQPILTALYVSMRGERVSPRQWLGLLFGIAGVGLVVANKLHLAGVNVTTLGFCVGAL
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LSITAGTLYQKRFCPVFDLRMGACIQFGASALLCLPFMFAFETRAVQWTGPMIGALVWSV
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHH
LALSIGAISLLFMLIRQGAATKVTSLLYLTPPTTAAMAWALFGERFPPLAALGMVIAACG
HHHHHHHHHHHHHHHHCCCHHHHHHEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
VALVIRR
HHHHHCC
>Mature Secondary Structure 
TQAYSAARMPALDSLFVAAMPWLFVLIWSTGFVVAKFGMPYAEPITFLFLRFVGVLVCL
CCCCCHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LPLVWVARVPLPRRAGADADAVDWRTIGHLAVAGVLMQWGYLGGVWEAIKLGMPAGMSAL
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
IVGMQPILTALYVSMRGERVSPRQWLGLLFGIAGVGLVVANKLHLAGVNVTTLGFCVGAL
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LSITAGTLYQKRFCPVFDLRMGACIQFGASALLCLPFMFAFETRAVQWTGPMIGALVWSV
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHH
LALSIGAISLLFMLIRQGAATKVTSLLYLTPPTTAAMAWALFGERFPPLAALGMVIAACG
HHHHHHHHHHHHHHHHCCCHHHHHHEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
VALVIRR
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA