The gene/protein map for NC_003295 is currently unavailable.
Definition Ralstonia solanacearum GMI1000, complete genome.
Accession NC_003295
Length 3,716,413

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The map label for this gene is hbdH1 [H]

Identifier: 17546291

GI number: 17546291

Start: 1687608

End: 1688387

Strand: Direct

Name: hbdH1 [H]

Synonym: RSc1572

Alternate gene names: 17546291

Gene position: 1687608-1688387 (Clockwise)

Preceding gene: 17546290

Following gene: 17546292

Centisome position: 45.41

GC content: 68.59

Gene sequence:

>780_bases
ATGCTGCAAGGAAAAACCGCCCTGGTGACCGGCTCCACCAGCGGCATCGGCCTGGGCATTGCCTGCGCGCTCGCGGCGCA
GGGCGCCAACATCGTCATGAACGGCTTCGGCGACCTGGACGGGCCCAAGGCCCGGATCGCCGGGGCCGGCAAGGATGCCG
TCCGCGTCGGCTACCACGGCGCCGACATGAGCAAGCCCGCCGAGATCGAGGCGATGTTCGCCTACGCCGATGCCGAATTC
GGCGGCGTGGACATTCTCGTCAACAACGCCGGCATCCAGCACGTGGCCAACGTGGAAGACTTCCCGGCCGAGCGCTGGGA
CGCCATCCTCGCCATCAACCTGTCGTCGGCGTTCCACACCACGCGGCTCGCGGTGCCGGGCATGAAGCGCAAGAACTGGG
GCCGCATCGTCAATATCGCCTCCGCGCACGGGCTGGTGGCGTCGGCGCAGAAGTCGGCCTACGTGGCGGCCAAGCACGGC
ATCGTCGGCCTGACCAAGGCGGTGGCACTGGAGACCGCGCAGACCGGCGTTACCGTCAACGCGATCTGCCCGGGCTGGGT
GCTGACGCCGCTGGTGCAGAAGCAGATCGACGCGCGTGCCGAGAAAGAGGGCATTCCCGTCCTGCAGGCCAAGAAGGAAC
TGCTGATGGAGAAGCAGCCCTCCGGCGAATTCGTCTCGCCCGAGCAGCTCGGCGCGCTGGCGGTGTTCCTGTGCAGCGAG
GCCGCCGAGCAGGTGCGCGGCGTGGCGTGGAGCATGGACGGCGGCTGGGTCGCGCAGTAA

Upstream 100 bases:

>100_bases
ACCGAGCATGGCCTGAAGCTGGTGGAGGCCGCGCCGGGTGTCTCGCGCGAGGACATCCAGTCGAAGACGGGCGTCAACCT
GCTGTAAACCGGAGAACGTC

Downstream 100 bases:

>100_bases
GACGCCTCGTCATCGGCGAACAGGCCTCGCGGTTGCGAGGCCTTTTTGTTGCCGGTGCGCGGCCCGGTGCGCGGGCGCAT
CGCGCCGGGCACGGCGTACA

Product: 3-hydroxybutyrate dehydrogenase

Products: NA

Alternate protein names: BDH; 3-hydroxybutyrate dehydrogenase; 3-HBDH [H]

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MLQGKTALVTGSTSGIGLGIACALAAQGANIVMNGFGDLDGPKARIAGAGKDAVRVGYHGADMSKPAEIEAMFAYADAEF
GGVDILVNNAGIQHVANVEDFPAERWDAILAINLSSAFHTTRLAVPGMKRKNWGRIVNIASAHGLVASAQKSAYVAAKHG
IVGLTKAVALETAQTGVTVNAICPGWVLTPLVQKQIDARAEKEGIPVLQAKKELLMEKQPSGEFVSPEQLGALAVFLCSE
AAEQVRGVAWSMDGGWVAQ

Sequences:

>Translated_259_residues
MLQGKTALVTGSTSGIGLGIACALAAQGANIVMNGFGDLDGPKARIAGAGKDAVRVGYHGADMSKPAEIEAMFAYADAEF
GGVDILVNNAGIQHVANVEDFPAERWDAILAINLSSAFHTTRLAVPGMKRKNWGRIVNIASAHGLVASAQKSAYVAAKHG
IVGLTKAVALETAQTGVTVNAICPGWVLTPLVQKQIDARAEKEGIPVLQAKKELLMEKQPSGEFVSPEQLGALAVFLCSE
AAEQVRGVAWSMDGGWVAQ
>Mature_259_residues
MLQGKTALVTGSTSGIGLGIACALAAQGANIVMNGFGDLDGPKARIAGAGKDAVRVGYHGADMSKPAEIEAMFAYADAEF
GGVDILVNNAGIQHVANVEDFPAERWDAILAINLSSAFHTTRLAVPGMKRKNWGRIVNIASAHGLVASAQKSAYVAAKHG
IVGLTKAVALETAQTGVTVNAICPGWVLTPLVQKQIDARAEKEGIPVLQAKKELLMEKQPSGEFVSPEQLGALAVFLCSE
AAEQVRGVAWSMDGGWVAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI66933014, Length=196, Percent_Identity=32.1428571428571, Blast_Score=105, Evalue=3e-23,
Organism=Homo sapiens, GI32483357, Length=257, Percent_Identity=32.6848249027237, Blast_Score=105, Evalue=4e-23,
Organism=Homo sapiens, GI31542939, Length=198, Percent_Identity=34.8484848484849, Blast_Score=103, Evalue=1e-22,
Organism=Homo sapiens, GI4504505, Length=263, Percent_Identity=29.277566539924, Blast_Score=102, Evalue=3e-22,
Organism=Homo sapiens, GI15277342, Length=266, Percent_Identity=29.3233082706767, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI59889578, Length=188, Percent_Identity=35.1063829787234, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI19923817, Length=266, Percent_Identity=26.3157894736842, Blast_Score=86, Evalue=2e-17,
Organism=Homo sapiens, GI224922801, Length=172, Percent_Identity=33.7209302325581, Blast_Score=85, Evalue=7e-17,
Organism=Homo sapiens, GI109715829, Length=217, Percent_Identity=30.4147465437788, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI40254992, Length=252, Percent_Identity=27.7777777777778, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI4758504, Length=207, Percent_Identity=31.4009661835749, Blast_Score=82, Evalue=3e-16,
Organism=Homo sapiens, GI126723191, Length=199, Percent_Identity=31.1557788944724, Blast_Score=82, Evalue=7e-16,
Organism=Homo sapiens, GI5031737, Length=250, Percent_Identity=29.6, Blast_Score=81, Evalue=7e-16,
Organism=Homo sapiens, GI33667109, Length=192, Percent_Identity=31.25, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI20149619, Length=253, Percent_Identity=28.0632411067194, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI142976729, Length=198, Percent_Identity=30.8080808080808, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI40254986, Length=191, Percent_Identity=31.9371727748691, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI7706318, Length=201, Percent_Identity=27.8606965174129, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI40807363, Length=200, Percent_Identity=30.5, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI4503817, Length=193, Percent_Identity=30.0518134715026, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI7705925, Length=259, Percent_Identity=27.7992277992278, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI25282469, Length=243, Percent_Identity=25.9259259259259, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI7657478, Length=187, Percent_Identity=29.4117647058824, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI83715985, Length=192, Percent_Identity=30.2083333333333, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI126723750, Length=260, Percent_Identity=28.8461538461538, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI87082100, Length=256, Percent_Identity=34.765625, Blast_Score=136, Evalue=1e-33,
Organism=Escherichia coli, GI1787335, Length=259, Percent_Identity=32.8185328185328, Blast_Score=131, Evalue=4e-32,
Organism=Escherichia coli, GI1789208, Length=259, Percent_Identity=33.5907335907336, Blast_Score=130, Evalue=9e-32,
Organism=Escherichia coli, GI87082160, Length=258, Percent_Identity=32.9457364341085, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1790717, Length=261, Percent_Identity=28.735632183908, Blast_Score=117, Evalue=5e-28,
Organism=Escherichia coli, GI1788459, Length=254, Percent_Identity=31.8897637795276, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1789057, Length=260, Percent_Identity=30.7692307692308, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1787905, Length=263, Percent_Identity=28.1368821292776, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI2367175, Length=193, Percent_Identity=35.2331606217617, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1789378, Length=259, Percent_Identity=26.6409266409266, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1786812, Length=255, Percent_Identity=26.2745098039216, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787820, Length=207, Percent_Identity=31.8840579710145, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI2367365, Length=256, Percent_Identity=26.5625, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1786701, Length=216, Percent_Identity=27.3148148148148, Blast_Score=65, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17560676, Length=264, Percent_Identity=28.4090909090909, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI25147288, Length=259, Percent_Identity=28.957528957529, Blast_Score=97, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI17555706, Length=264, Percent_Identity=28.030303030303, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17564282, Length=194, Percent_Identity=31.4432989690722, Blast_Score=91, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI17559104, Length=268, Percent_Identity=30.9701492537313, Blast_Score=91, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI17561402, Length=263, Percent_Identity=27.3764258555133, Blast_Score=91, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI193203115, Length=190, Percent_Identity=33.1578947368421, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI193203117, Length=190, Percent_Identity=33.1578947368421, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI71994604, Length=251, Percent_Identity=28.2868525896414, Blast_Score=88, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI17560150, Length=265, Percent_Identity=28.6792452830189, Blast_Score=85, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17568967, Length=201, Percent_Identity=30.3482587064677, Blast_Score=84, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI17508895, Length=195, Percent_Identity=29.7435897435897, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI71994600, Length=257, Percent_Identity=28.0155642023346, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17531453, Length=268, Percent_Identity=30.5970149253731, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17538182, Length=202, Percent_Identity=32.6732673267327, Blast_Score=81, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17562990, Length=261, Percent_Identity=27.2030651340996, Blast_Score=77, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI71982365, Length=209, Percent_Identity=29.6650717703349, Blast_Score=77, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI17562908, Length=265, Percent_Identity=29.4339622641509, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI72000259, Length=274, Percent_Identity=28.4671532846715, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17560332, Length=265, Percent_Identity=28.6792452830189, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17538480, Length=196, Percent_Identity=29.5918367346939, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17536651, Length=261, Percent_Identity=26.4367816091954, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17558628, Length=192, Percent_Identity=30.7291666666667, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17562906, Length=268, Percent_Identity=28.7313432835821, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17536025, Length=266, Percent_Identity=26.6917293233083, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17563726, Length=264, Percent_Identity=27.6515151515151, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17562910, Length=262, Percent_Identity=26.3358778625954, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17544670, Length=277, Percent_Identity=26.3537906137184, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17562904, Length=266, Percent_Identity=26.3157894736842, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17538486, Length=263, Percent_Identity=26.9961977186312, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17555612, Length=212, Percent_Identity=30.188679245283, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17551412, Length=196, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI193204405, Length=276, Percent_Identity=28.2608695652174, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI32563809, Length=254, Percent_Identity=26.7716535433071, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17507613, Length=254, Percent_Identity=26.7716535433071, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17560220, Length=269, Percent_Identity=27.8810408921933, Blast_Score=64, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=208, Percent_Identity=30.7692307692308, Blast_Score=90, Evalue=4e-19,
Organism=Drosophila melanogaster, GI24644339, Length=258, Percent_Identity=32.5581395348837, Blast_Score=108, Evalue=3e-24,
Organism=Drosophila melanogaster, GI21357041, Length=258, Percent_Identity=31.0077519379845, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI23397609, Length=256, Percent_Identity=32.421875, Blast_Score=102, Evalue=2e-22,
Organism=Drosophila melanogaster, GI18859837, Length=187, Percent_Identity=34.7593582887701, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI21355319, Length=263, Percent_Identity=30.0380228136882, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI28571526, Length=259, Percent_Identity=31.6602316602317, Blast_Score=98, Evalue=7e-21,
Organism=Drosophila melanogaster, GI24639444, Length=259, Percent_Identity=27.4131274131274, Blast_Score=88, Evalue=6e-18,
Organism=Drosophila melanogaster, GI28571387, Length=217, Percent_Identity=28.110599078341, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI21357673, Length=191, Percent_Identity=29.8429319371728, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI21355631, Length=173, Percent_Identity=32.3699421965318, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI161076933, Length=192, Percent_Identity=31.25, Blast_Score=78, Evalue=6e-15,
Organism=Drosophila melanogaster, GI24584748, Length=192, Percent_Identity=31.25, Blast_Score=77, Evalue=9e-15,
Organism=Drosophila melanogaster, GI28574402, Length=197, Percent_Identity=28.9340101522843, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24584744, Length=197, Percent_Identity=28.9340101522843, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI21358495, Length=193, Percent_Identity=26.4248704663212, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24644337, Length=198, Percent_Identity=30.8080808080808, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI281364892, Length=178, Percent_Identity=29.7752808988764, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI17737361, Length=205, Percent_Identity=28.780487804878, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI116007236, Length=217, Percent_Identity=29.4930875576037, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24665243, Length=197, Percent_Identity=29.4416243654822, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI221331218, Length=197, Percent_Identity=29.4416243654822, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI17647419, Length=189, Percent_Identity=26.4550264550265, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24648693, Length=220, Percent_Identity=29.0909090909091, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21355889, Length=220, Percent_Identity=29.0909090909091, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24643142, Length=255, Percent_Identity=26.2745098039216, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24665264, Length=143, Percent_Identity=32.1678321678322, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI221331216, Length=200, Percent_Identity=30, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24665247, Length=200, Percent_Identity=30, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24641388, Length=209, Percent_Identity=28.7081339712919, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011294
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.30 [H]

Molecular weight: Translated: 26930; Mature: 26930

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MLQGKTALVTGSTSGIGLGIACALAAQGANIVMNGFGDLDGPKARIAGAGKDAVRVGYHG
CCCCCEEEEECCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCEEEECCCCCEEEEEECC
ADMSKPAEIEAMFAYADAEFGGVDILVNNAGIQHVANVEDFPAERWDAILAINLSSAFHT
CCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCEECCCCCCCCCCCCEEEEEEECCCCCE
TRLAVPGMKRKNWGRIVNIASAHGLVASAQKSAYVAAKHGIVGLTKAVALETAQTGVTVN
EEEECCCCCCCCCCCEEEEECCCCCHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCEEEE
AICPGWVLTPLVQKQIDARAEKEGIPVLQAKKELLMEKQPSGEFVSPEQLGALAVFLCSE
EECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
AAEQVRGVAWSMDGGWVAQ
HHHHHHCEEEECCCCEECC
>Mature Secondary Structure
MLQGKTALVTGSTSGIGLGIACALAAQGANIVMNGFGDLDGPKARIAGAGKDAVRVGYHG
CCCCCEEEEECCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCEEEECCCCCEEEEEECC
ADMSKPAEIEAMFAYADAEFGGVDILVNNAGIQHVANVEDFPAERWDAILAINLSSAFHT
CCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCEECCCCCCCCCCCCEEEEEEECCCCCE
TRLAVPGMKRKNWGRIVNIASAHGLVASAQKSAYVAAKHGIVGLTKAVALETAQTGVTVN
EEEECCCCCCCCCCCEEEEECCCCCHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCEEEE
AICPGWVLTPLVQKQIDARAEKEGIPVLQAKKELLMEKQPSGEFVSPEQLGALAVFLCSE
EECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
AAEQVRGVAWSMDGGWVAQ
HHHHHHCEEEECCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA