| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is exuT2 [H]
Identifier: 17545799
GI number: 17545799
Start: 1136244
End: 1137542
Strand: Direct
Name: exuT2 [H]
Synonym: RSc1080
Alternate gene names: 17545799
Gene position: 1136244-1137542 (Clockwise)
Preceding gene: 17545798
Following gene: 17545800
Centisome position: 30.57
GC content: 68.13
Gene sequence:
>1299_bases GTGAAGACCATCAAGGGCCTGCGCTGGTGGATCATCGCACTGGTGTGCCTGGGCACCATTACGAACTACCTGGCGCGCAA TTCGCTCGGCGTGCTGGCGCCGCAGCTCAAGACCGAGCTGGGCATGAGCACACAGCAGTATTCCTACGTGGTCGGTGCGT TCCAGATCGGCTACACGATCATGCAGCCGGTGTGCGGGTTCATCGTCGACCTGATCGGCCTGCGCATCGGCTTTGCGCTG TTCGCGGTGCTGTGGTCGATTGCCGGCTGCCTGCATGCGGGCGCGTCGGGCTGGCTGTCGCTGGCGAGCTTCCGGGGGCT GATGGGGCTGACCGAGGCCGCGGCCATCCCGTCGGGCATGAAGGCGGTGGCGGAGTGGTTTCCGGACAAGGAGAAATCCG TCGCGGTGGGCTACTTCAATGCGGGCACGTCGCTGGGGGCCCTGCTGGCGCCGCCGCTGGTGGTGTTCCTGTCGCTGCGC TACGGCTGGCAGTCGGCGTTCGTGGTGACGGGGGCGCTGGGTTTTGTGTGGGCCGCGCTGTGGTACGGCTTCTACCGCTC GCCGCGCGAGCATGCCAAGCTGTCGGCCACCGAGCACGACCGGATCATCGGCGGGCAGATCCGCTCGGCGGGCGCCGCGC GCGGCAAGCGGCCGGTGCGCGAGGTGGTGACGTCGCGGCGCTTCTGGGCGATCGCGCTGCCGCGCTTCTTTGCCGAGCCG GCGTGGCAGACGTTCAGCTTCTGGATTCCGCTGTACCTGTCGAGCGCGCGGCACATGGACCTGAAGGAGATTGCGCTGTT CGCCTGGCTGCCGTTTCTGGCGGCGGACCTGGGCGGGCTGCTGGGCGGCTATCTGTCGCCGTTCTTCATGAAGTTTTTCC GCGTGCCGCTGATCTGGTCGCGCGTGTGCGGCGTGGTGCTGGGCGCGTTCCTGATGATCGGGCCGGCGTGCATCGGGCTG GTGGCGTCGCCGTATCAGGCCATCGCGCTGTTCTGCGTGGGCGGCTTCGCGCACCAGATGATCTCGACCCTGGTCAACAC GCTCAGCGCCGACGTCTTCGATCCGGAAGAGGTGGGCACCGCCAGCGGCTTTGCCGGCATGGCTGCGTGGATCGGCGGCC TCGGCTTCTCGCTGATGGTCGGCGCGCTGGCCGACACCGTCGGCTACGGCCCGCTGTTCGGCCTGCTGGGCGCGTTCGAT CTGATCGGCGCGACGCTGCTGATCCTGTTGATCCGCGGGCAGTCGCAGGAGGAGCGCGCGGCGCGCCAGATGCAGCACCA CCTCTCCGCTTCCCATTGA
Upstream 100 bases:
>100_bases CGGCCGTGCCTGGTGCGCTGAGGCGCGGCTAGGCCATCCGGGGGGCGCTGCGCCGCTCCCCTCGGTTTCAACCCATAAAA AAGACATCCGGAGACAACGC
Downstream 100 bases:
>100_bases GTTGATACCGATGTCCATGCTGCATCCTCCCCGCTTCGCGCTCCAGGCGCGTGAAGGCAATCACCTCCGCCTGGTCAGCG CCACGGGTGCCGCGATCGAA
Product: hexuronate transporter transmembrane protein
Products: galacturonate [Cytoplasm]; Proton [Cytoplasm]; glucuronate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MKTIKGLRWWIIALVCLGTITNYLARNSLGVLAPQLKTELGMSTQQYSYVVGAFQIGYTIMQPVCGFIVDLIGLRIGFAL FAVLWSIAGCLHAGASGWLSLASFRGLMGLTEAAAIPSGMKAVAEWFPDKEKSVAVGYFNAGTSLGALLAPPLVVFLSLR YGWQSAFVVTGALGFVWAALWYGFYRSPREHAKLSATEHDRIIGGQIRSAGAARGKRPVREVVTSRRFWAIALPRFFAEP AWQTFSFWIPLYLSSARHMDLKEIALFAWLPFLAADLGGLLGGYLSPFFMKFFRVPLIWSRVCGVVLGAFLMIGPACIGL VASPYQAIALFCVGGFAHQMISTLVNTLSADVFDPEEVGTASGFAGMAAWIGGLGFSLMVGALADTVGYGPLFGLLGAFD LIGATLLILLIRGQSQEERAARQMQHHLSASH
Sequences:
>Translated_432_residues MKTIKGLRWWIIALVCLGTITNYLARNSLGVLAPQLKTELGMSTQQYSYVVGAFQIGYTIMQPVCGFIVDLIGLRIGFAL FAVLWSIAGCLHAGASGWLSLASFRGLMGLTEAAAIPSGMKAVAEWFPDKEKSVAVGYFNAGTSLGALLAPPLVVFLSLR YGWQSAFVVTGALGFVWAALWYGFYRSPREHAKLSATEHDRIIGGQIRSAGAARGKRPVREVVTSRRFWAIALPRFFAEP AWQTFSFWIPLYLSSARHMDLKEIALFAWLPFLAADLGGLLGGYLSPFFMKFFRVPLIWSRVCGVVLGAFLMIGPACIGL VASPYQAIALFCVGGFAHQMISTLVNTLSADVFDPEEVGTASGFAGMAAWIGGLGFSLMVGALADTVGYGPLFGLLGAFD LIGATLLILLIRGQSQEERAARQMQHHLSASH >Mature_432_residues MKTIKGLRWWIIALVCLGTITNYLARNSLGVLAPQLKTELGMSTQQYSYVVGAFQIGYTIMQPVCGFIVDLIGLRIGFAL FAVLWSIAGCLHAGASGWLSLASFRGLMGLTEAAAIPSGMKAVAEWFPDKEKSVAVGYFNAGTSLGALLAPPLVVFLSLR YGWQSAFVVTGALGFVWAALWYGFYRSPREHAKLSATEHDRIIGGQIRSAGAARGKRPVREVVTSRRFWAIALPRFFAEP AWQTFSFWIPLYLSSARHMDLKEIALFAWLPFLAADLGGLLGGYLSPFFMKFFRVPLIWSRVCGVVLGAFLMIGPACIGL VASPYQAIALFCVGGFAHQMISTLVNTLSADVFDPEEVGTASGFAGMAAWIGGLGFSLMVGALADTVGYGPLFGLLGAFD LIGATLLILLIRGQSQEERAARQMQHHLSASH
Specific function: Aldohexuronate transport system [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]
Homologues:
Organism=Homo sapiens, GI148743791, Length=398, Percent_Identity=26.3819095477387, Blast_Score=96, Evalue=7e-20, Organism=Homo sapiens, GI148728191, Length=350, Percent_Identity=28.2857142857143, Blast_Score=92, Evalue=9e-19, Organism=Homo sapiens, GI6912666, Length=438, Percent_Identity=23.7442922374429, Blast_Score=86, Evalue=5e-17, Organism=Homo sapiens, GI154800443, Length=341, Percent_Identity=23.7536656891496, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI154350196, Length=409, Percent_Identity=24.9388753056235, Blast_Score=72, Evalue=9e-13, Organism=Homo sapiens, GI5031955, Length=198, Percent_Identity=24.7474747474747, Blast_Score=68, Evalue=2e-11, Organism=Escherichia coli, GI2367193, Length=433, Percent_Identity=50.8083140877598, Blast_Score=436, Evalue=1e-123, Organism=Escherichia coli, GI87082320, Length=418, Percent_Identity=26.555023923445, Blast_Score=158, Evalue=6e-40, Organism=Escherichia coli, GI2367379, Length=337, Percent_Identity=29.3768545994065, Blast_Score=151, Evalue=7e-38, Organism=Escherichia coli, GI1789515, Length=320, Percent_Identity=27.1875, Blast_Score=133, Evalue=2e-32, Organism=Escherichia coli, GI1789152, Length=398, Percent_Identity=25.1256281407035, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI87082310, Length=427, Percent_Identity=21.7798594847775, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI1788573, Length=437, Percent_Identity=21.2814645308924, Blast_Score=62, Evalue=8e-11, Organism=Caenorhabditis elegans, GI17560030, Length=360, Percent_Identity=26.1111111111111, Blast_Score=89, Evalue=6e-18, Organism=Caenorhabditis elegans, GI25141318, Length=278, Percent_Identity=26.6187050359712, Blast_Score=73, Evalue=3e-13, Organism=Caenorhabditis elegans, GI86561091, Length=277, Percent_Identity=26.7148014440433, Blast_Score=72, Evalue=5e-13, Organism=Caenorhabditis elegans, GI25141316, Length=277, Percent_Identity=26.7148014440433, Blast_Score=72, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17554148, Length=365, Percent_Identity=24.6575342465753, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17552542, Length=265, Percent_Identity=26.4150943396226, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI25141341, Length=212, Percent_Identity=28.3018867924528, Blast_Score=68, Evalue=8e-12, Organism=Caenorhabditis elegans, GI193205400, Length=202, Percent_Identity=24.2574257425743, Blast_Score=65, Evalue=9e-11, Organism=Drosophila melanogaster, GI20129235, Length=353, Percent_Identity=28.0453257790368, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI24648416, Length=289, Percent_Identity=28.0276816608997, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI21356189, Length=289, Percent_Identity=28.0276816608997, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI24658658, Length=404, Percent_Identity=25.7425742574257, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI24641682, Length=386, Percent_Identity=24.8704663212435, Blast_Score=78, Evalue=2e-14, Organism=Drosophila melanogaster, GI28573708, Length=445, Percent_Identity=23.3707865168539, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI28573707, Length=445, Percent_Identity=23.3707865168539, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI45550460, Length=254, Percent_Identity=24.8031496062992, Blast_Score=75, Evalue=8e-14, Organism=Drosophila melanogaster, GI24655255, Length=251, Percent_Identity=24.7011952191235, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI24639764, Length=295, Percent_Identity=21.0169491525424, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI24580790, Length=287, Percent_Identity=25.4355400696864, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI19922400, Length=247, Percent_Identity=26.3157894736842, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI45550364, Length=293, Percent_Identity=25.2559726962457, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI24654215, Length=247, Percent_Identity=26.3157894736842, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI20130135, Length=256, Percent_Identity=25.390625, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI24658674, Length=281, Percent_Identity=24.5551601423488, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI24655271, Length=256, Percent_Identity=25.390625, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI28573299, Length=293, Percent_Identity=23.8907849829352, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004744 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46666; Mature: 46666
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTIKGLRWWIIALVCLGTITNYLARNSLGVLAPQLKTELGMSTQQYSYVVGAFQIGYTI CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH MQPVCGFIVDLIGLRIGFALFAVLWSIAGCLHAGASGWLSLASFRGLMGLTEAAAIPSGM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHH KAVAEWFPDKEKSVAVGYFNAGTSLGALLAPPLVVFLSLRYGWQSAFVVTGALGFVWAAL HHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH WYGFYRSPREHAKLSATEHDRIIGGQIRSAGAARGKRPVREVVTSRRFWAIALPRFFAEP HHHHHCCCHHHHHCCCCCCCHHHCCHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCC AWQTFSFWIPLYLSSARHMDLKEIALFAWLPFLAADLGGLLGGYLSPFFMKFFRVPLIWS CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVCGVVLGAFLMIGPACIGLVASPYQAIALFCVGGFAHQMISTLVNTLSADVFDPEEVGT HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCC ASGFAGMAAWIGGLGFSLMVGALADTVGYGPLFGLLGAFDLIGATLLILLIRGQSQEERA CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH ARQMQHHLSASH HHHHHHHHCCCC >Mature Secondary Structure MKTIKGLRWWIIALVCLGTITNYLARNSLGVLAPQLKTELGMSTQQYSYVVGAFQIGYTI CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH MQPVCGFIVDLIGLRIGFALFAVLWSIAGCLHAGASGWLSLASFRGLMGLTEAAAIPSGM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHH KAVAEWFPDKEKSVAVGYFNAGTSLGALLAPPLVVFLSLRYGWQSAFVVTGALGFVWAAL HHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH WYGFYRSPREHAKLSATEHDRIIGGQIRSAGAARGKRPVREVVTSRRFWAIALPRFFAEP HHHHHCCCHHHHHCCCCCCCHHHCCHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCC AWQTFSFWIPLYLSSARHMDLKEIALFAWLPFLAADLGGLLGGYLSPFFMKFFRVPLIWS CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVCGVVLGAFLMIGPACIGLVASPYQAIALFCVGGFAHQMISTLVNTLSADVFDPEEVGT HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCC ASGFAGMAAWIGGLGFSLMVGALADTVGYGPLFGLLGAFDLIGATLLILLIRGQSQEERA CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH ARQMQHHLSASH HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: galacturonate [Periplasm]; Proton [Periplasm]; glucuronate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + galacturonate [Periplasm] = galacturonate [Cytoplasm] + Proton [Cytoplasm] Proton [Periplasm] + glucuronate [Periplasm] = Proton [Cytoplasm] + glucuronate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]