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The map label for this gene is pdxJ [H]

Identifier: 17545785

GI number: 17545785

Start: 1119095

End: 1119886

Strand: Direct

Name: pdxJ [H]

Synonym: RSc1066

Alternate gene names: 17545785

Gene position: 1119095-1119886 (Clockwise)

Preceding gene: 17545784

Following gene: 17545786

Centisome position: 30.11

GC content: 69.7

Gene sequence:

>792_bases
ATGATCTTTCATGCCTCGCCGGGTGTCATCGACCTTGGGGTCAATATCGACCACGTCGCCACGCTGCGCAACGCGCGCGG
CACCACCTACCCGGACCCGATCGCCGCGGCGCTGCTGGCCGAGGAGGCCGGCGCCGACCTCATCACGCTGCACCTGCGCG
AAGACCGCCGGCACATCAAGGACGCCGACGTGCGCGCATTGCGGCCGCAACTGCGCACGCGGATGAACCTGGAGTGCGCT
GTCACGCAGGAGATGCTCGACATTGCGTGCGATATCGGTCCGCAGGACGTCTGTCTGGTGCCCGAGCGGCGGCAGGAGGT
GACCACCGAGGGCGGTCTGGACGTGGTGGGCGGCTTCGCCAAGGTGCAGGCCGCGTGCCAGCAGTTGGCGGGCGCGGGCA
TCCGCGTGTCGCTGTTCATCGATCCGGACCCGGCGCAGATCGAGGCCGCTGCGGCGACCGGGGCGCCGGTCGTTGAGCTG
CATACCGGCCGCTACGCGGAGGCCACCGACGACGCCGAAGTGAAGGCCGAGCTGGTGCGCATCGAGCGTGCGGTGGAAGA
GGGCATCCGCTGGGGGCTGCGCGTCAATGCCGGGCACGGCCTGCACTACACCAACGTGCAGCCGATCGCGGCGATGGCGG
GCATCCACGAACTCAACATCGGCCACGCCATCGTCGCGCATGCCGTGTTTGCCGGCTGGCAGAACGCGGTGCGCGAGATG
AAGGCCATCATGGTGGCGGCACGCCTGTCGGCGACGACGCCAGCGGCAGCGCATCCGGGCGTGCCGGCATGA

Upstream 100 bases:

>100_bases
CGGCCACGCAGAGCCGCAGCCTGATGCGGTTCCTGCTGCATTATCATTTGCACGGCACGCCGCTTTCGACGCGCCAGATC
CTGATCGACTTGCAGAAACT

Downstream 100 bases:

>100_bases
GCGAACGGCCTGCCGTTCCGCCGGTGTCCGGTGCCATTTATGGCATCGGCACCGACATCATCCAGATCGAGCGCGTCGAA
GGCGTGATGCAGCGGACTCA

Product: pyridoxine 5'-phosphate synthase

Products: NA

Alternate protein names: PNP synthase [H]

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MIFHASPGVIDLGVNIDHVATLRNARGTTYPDPIAAALLAEEAGADLITLHLREDRRHIKDADVRALRPQLRTRMNLECA
VTQEMLDIACDIGPQDVCLVPERRQEVTTEGGLDVVGGFAKVQAACQQLAGAGIRVSLFIDPDPAQIEAAAATGAPVVEL
HTGRYAEATDDAEVKAELVRIERAVEEGIRWGLRVNAGHGLHYTNVQPIAAMAGIHELNIGHAIVAHAVFAGWQNAVREM
KAIMVAARLSATTPAAAHPGVPA

Sequences:

>Translated_263_residues
MIFHASPGVIDLGVNIDHVATLRNARGTTYPDPIAAALLAEEAGADLITLHLREDRRHIKDADVRALRPQLRTRMNLECA
VTQEMLDIACDIGPQDVCLVPERRQEVTTEGGLDVVGGFAKVQAACQQLAGAGIRVSLFIDPDPAQIEAAAATGAPVVEL
HTGRYAEATDDAEVKAELVRIERAVEEGIRWGLRVNAGHGLHYTNVQPIAAMAGIHELNIGHAIVAHAVFAGWQNAVREM
KAIMVAARLSATTPAAAHPGVPA
>Mature_263_residues
MIFHASPGVIDLGVNIDHVATLRNARGTTYPDPIAAALLAEEAGADLITLHLREDRRHIKDADVRALRPQLRTRMNLECA
VTQEMLDIACDIGPQDVCLVPERRQEVTTEGGLDVVGGFAKVQAACQQLAGAGIRVSLFIDPDPAQIEAAAATGAPVVEL
HTGRYAEATDDAEVKAELVRIERAVEEGIRWGLRVNAGHGLHYTNVQPIAAMAGIHELNIGHAIVAHAVFAGWQNAVREM
KAIMVAARLSATTPAAAHPGVPA

Specific function: Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate [H]

COG id: COG0854

COG function: function code H; Pyridoxal phosphate biosynthesis protein

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PNP synthase family [H]

Homologues:

Organism=Escherichia coli, GI1788917, Length=237, Percent_Identity=64.1350210970464, Blast_Score=297, Evalue=4e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR004569 [H]

Pfam domain/function: PF03740 PdxJ [H]

EC number: =2.6.99.2 [H]

Molecular weight: Translated: 27987; Mature: 27987

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFHASPGVIDLGVNIDHVATLRNARGTTYPDPIAAALLAEEAGADLITLHLREDRRHIK
CEEECCCCEEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEHHHHHCC
DADVRALRPQLRTRMNLECAVTQEMLDIACDIGPQDVCLVPERRQEVTTEGGLDVVGGFA
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEECCHHHHHHCCCCCHHHHHHHH
KVQAACQQLAGAGIRVSLFIDPDPAQIEAAAATGAPVVELHTGRYAEATDDAEVKAELVR
HHHHHHHHHCCCCEEEEEEECCCCHHEEEECCCCCCEEEEECCCCCCCCCCHHHHHHHHH
IERAVEEGIRWGLRVNAGHGLHYTNVQPIAAMAGIHELNIGHAIVAHAVFAGWQNAVREM
HHHHHHHHHHCCEEECCCCCEEECCCCHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHH
KAIMVAARLSATTPAAAHPGVPA
HHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MIFHASPGVIDLGVNIDHVATLRNARGTTYPDPIAAALLAEEAGADLITLHLREDRRHIK
CEEECCCCEEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEHHHHHCC
DADVRALRPQLRTRMNLECAVTQEMLDIACDIGPQDVCLVPERRQEVTTEGGLDVVGGFA
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEECCHHHHHHCCCCCHHHHHHHH
KVQAACQQLAGAGIRVSLFIDPDPAQIEAAAATGAPVVELHTGRYAEATDDAEVKAELVR
HHHHHHHHHCCCCEEEEEEECCCCHHEEEECCCCCCEEEEECCCCCCCCCCHHHHHHHHH
IERAVEEGIRWGLRVNAGHGLHYTNVQPIAAMAGIHELNIGHAIVAHAVFAGWQNAVREM
HHHHHHHHHHCCEEECCCCCEEECCCCHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHH
KAIMVAARLSATTPAAAHPGVPA
HHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA