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The map label for this gene is recO

Identifier: 17545784

GI number: 17545784

Start: 1118280

End: 1119098

Strand: Direct

Name: recO

Synonym: RSc1065

Alternate gene names: 17545784

Gene position: 1118280-1119098 (Clockwise)

Preceding gene: 17545783

Following gene: 17545785

Centisome position: 30.09

GC content: 68.01

Gene sequence:

>819_bases
ATGGCGGGACGATCCGATCCGATTCCGGACGAGGCGGCGGAATGGCTGGCCGAGGAGGGCGTTGCCGGCGCCGCGCCGCG
CAAGGGCTTTCCCGCCGCGCGCGCCGAGCATCGCGTCTCGCAGCAGCCGGCGTTCGTGCTGCACAGCTATCCCTATCGCG
AGACCAGCCTCATCATCGACGTCTTCACGCGCGATCACGGTCGGATCGCGCTGGTGGCCAAGGGCGCCAAGCGGCCGCAT
TCGGCCTTGCGCGCCGTGCTGCAGACGTTCCAGCCGCTGTCGCTGTCGTGGAGCGGGCGCGGTGAGGTGAAGACCCTGAC
GCGCGCCGAGTGGGTCGGCGGCATGCTGCCGCTGGGGGGCGAGGGGCTGCTGTCAGGCTTCTACCTGAACGAGCTGCTGG
TCAAGTTCGTTGCGCGGGAGGACGGGCACCCGGTGCTGTTTTCGCACTATGTGGAAACGCTCAACAAGCTCGCCCACGGC
GAGCCTGTTGCCTTCACGCTGCGCGCCTTCGAGCGCGTGCTGCTGCGCGAGACCGGTTTTGCCGCCCAGCTTGACCGCTG
CGTCGACGGCGAGCCCGTGCAGCCCGACGGCGACTACGTCTATCACCCCGAACGAGGCATCCGGCGCGCGCTGCCGAGCG
ATCCGTCCTCGTGGCCGGTGCTGCGCGGACAGACGCTGCTCGACATGGAGCGCGACGATTATTCCCGTCCGGCCACGGCC
ACGCAGAGCCGCAGCCTGATGCGGTTCCTGCTGCATTATCATTTGCACGGCACGCCGCTTTCGACGCGCCAGATCCTGAT
CGACTTGCAGAAACTATGA

Upstream 100 bases:

>100_bases
TCTACCTGGAGGTCTGGGTCAAGGTCAAGAGCGGCTGGGCCGACAACGAGGCCGGTCTGCGCGCCTACGGCTACGAATAG
CCTTTCCCACGCACGCGTCG

Downstream 100 bases:

>100_bases
TCTTTCATGCCTCGCCGGGTGTCATCGACCTTGGGGTCAATATCGACCACGTCGCCACGCTGCGCAACGCGCGCGGCACC
ACCTACCCGGACCCGATCGC

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MAGRSDPIPDEAAEWLAEEGVAGAAPRKGFPAARAEHRVSQQPAFVLHSYPYRETSLIIDVFTRDHGRIALVAKGAKRPH
SALRAVLQTFQPLSLSWSGRGEVKTLTRAEWVGGMLPLGGEGLLSGFYLNELLVKFVAREDGHPVLFSHYVETLNKLAHG
EPVAFTLRAFERVLLRETGFAAQLDRCVDGEPVQPDGDYVYHPERGIRRALPSDPSSWPVLRGQTLLDMERDDYSRPATA
TQSRSLMRFLLHYHLHGTPLSTRQILIDLQKL

Sequences:

>Translated_272_residues
MAGRSDPIPDEAAEWLAEEGVAGAAPRKGFPAARAEHRVSQQPAFVLHSYPYRETSLIIDVFTRDHGRIALVAKGAKRPH
SALRAVLQTFQPLSLSWSGRGEVKTLTRAEWVGGMLPLGGEGLLSGFYLNELLVKFVAREDGHPVLFSHYVETLNKLAHG
EPVAFTLRAFERVLLRETGFAAQLDRCVDGEPVQPDGDYVYHPERGIRRALPSDPSSWPVLRGQTLLDMERDDYSRPATA
TQSRSLMRFLLHYHLHGTPLSTRQILIDLQKL
>Mature_271_residues
AGRSDPIPDEAAEWLAEEGVAGAAPRKGFPAARAEHRVSQQPAFVLHSYPYRETSLIIDVFTRDHGRIALVAKGAKRPHS
ALRAVLQTFQPLSLSWSGRGEVKTLTRAEWVGGMLPLGGEGLLSGFYLNELLVKFVAREDGHPVLFSHYVETLNKLAHGE
PVAFTLRAFERVLLRETGFAAQLDRCVDGEPVQPDGDYVYHPERGIRRALPSDPSSWPVLRGQTLLDMERDDYSRPATAT
QSRSLMRFLLHYHLHGTPLSTRQILIDLQKL

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

Organism=Escherichia coli, GI2367140, Length=228, Percent_Identity=39.4736842105263, Blast_Score=139, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_RALSO (Q8Y0H9)

Other databases:

- EMBL:   AL646052
- RefSeq:   NP_519186.1
- ProteinModelPortal:   Q8Y0H9
- GeneID:   1219874
- GenomeReviews:   AL646052_GR
- KEGG:   rso:RSc1065
- NMPDR:   fig|267608.1.peg.1065
- HOGENOM:   HBG645116
- OMA:   SILQPFQ
- ProtClustDB:   PRK00085
- BioCyc:   RSOL267608:RSC1065-MONOMER
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 30351; Mature: 30220

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGRSDPIPDEAAEWLAEEGVAGAAPRKGFPAARAEHRVSQQPAFVLHSYPYRETSLIID
CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCEEEEE
VFTRDHGRIALVAKGAKRPHSALRAVLQTFQPLSLSWSGRGEVKTLTRAEWVGGMLPLGG
EEECCCCCEEEEECCCCCHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHCCCCCCCC
EGLLSGFYLNELLVKFVAREDGHPVLFSHYVETLNKLAHGEPVAFTLRAFERVLLRETGF
CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
AAQLDRCVDGEPVQPDGDYVYHPERGIRRALPSDPSSWPVLRGQTLLDMERDDYSRPATA
HHHHHHCCCCCCCCCCCCEEECCCHHHHHCCCCCCCCCCEECCCEEECCCCCCCCCCCCH
TQSRSLMRFLLHYHLHGTPLSTRQILIDLQKL
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
AGRSDPIPDEAAEWLAEEGVAGAAPRKGFPAARAEHRVSQQPAFVLHSYPYRETSLIID
CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCEEEEE
VFTRDHGRIALVAKGAKRPHSALRAVLQTFQPLSLSWSGRGEVKTLTRAEWVGGMLPLGG
EEECCCCCEEEEECCCCCHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHCCCCCCCC
EGLLSGFYLNELLVKFVAREDGHPVLFSHYVETLNKLAHGEPVAFTLRAFERVLLRETGF
CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
AAQLDRCVDGEPVQPDGDYVYHPERGIRRALPSDPSSWPVLRGQTLLDMERDDYSRPATA
HHHHHHCCCCCCCCCCCCEEECCCHHHHHCCCCCCCCCCEECCCEEECCCCCCCCCCCCH
TQSRSLMRFLLHYHLHGTPLSTRQILIDLQKL
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852