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The map label for this gene is etfB [H]

Identifier: 17545642

GI number: 17545642

Start: 974490

End: 975239

Strand: Direct

Name: etfB [H]

Synonym: RSc0923

Alternate gene names: 17545642

Gene position: 974490-975239 (Clockwise)

Preceding gene: 17545641

Following gene: 17545643

Centisome position: 26.22

GC content: 65.6

Gene sequence:

>750_bases
ATGAAAGTCCTGGTCGCAGTCAAGCGCGTGATTGACTACAACGTGAAGGTTCGCGTGAAGGCGGACGGCAGCGGTGTCGA
TCTTGCCAACGTCAAGATGAGCATGAACCCGTTCGACGAAATCGCCGTGGAAGAGGCGGTGCGCCTGAAGGAAGCGGGCG
TGGCCACCGAAGTGATCGCCGTGTCGTGCGGCGTGGCGCAGTGCCAGGAGACCCTGCGCACCGCCATGGCCATCGGCGCC
GACCGGGGCATCCTGGTCGAGACCGGCGAAGAGCTGCAGCCGCTGGCCGTGGCCAAGCTGCTCAAGGCGCTGATCGACAA
GGAACAGCCGCAGCTGATCATCCTGGGCAAGCAGGCGATTGACGACGACGCGAACCAGACCGGCCAGATGCTGGCGGCGC
TGGCCGGCCTGCCGCAAGCCACCTTCGCCTCGAAGGTGCAGATCGACGACGGCCGCGCTTCGGTCACGCGTGAAGTGGAC
GGTGGCCTGGAAACGCTGTCGGTCAAGCTGCCGGCGGTGGTCACCACCGACCTGCGCCTGAACGAGCCGCGCTACGTGAC
GCTGCCGAACATCATGAAGGCCAAGAAGAAGCAACTGGACACGGTCAAGCCGGAAGACCTGGGCGTGGACGTGGCGCCGC
GTCTGAAGACGCTCAAGGTGGCCGAGCCGCCCAAGCGCAGCGCCGGCGTGATGGTGCCCGATGTGGCGACGCTGGTGGCC
AAGCTCAAGACGGAAGCCAAGGTGCTGTGA

Upstream 100 bases:

>100_bases
TAAAATAGCACGACCGTTCGTAAAAATAACGCGGCCGACCGGCCGCCCGTATAATGGCCGGCGTTTTGCAAAATTCTCTT
ATCAATAGTGGAGTGAGCGC

Downstream 100 bases:

>100_bases
GGCGGCCAGCCGCATTCCGCACGTCTTTCAAGCACACCGAACAGGCAGATCAAGATGACCGCACTCGTTATTGCTGAACA
CGACAACCAATCCATCAAGG

Product: electron transfer flavoprotein subunit beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKVLVAVKRVIDYNVKVRVKADGSGVDLANVKMSMNPFDEIAVEEAVRLKEAGVATEVIAVSCGVAQCQETLRTAMAIGA
DRGILVETGEELQPLAVAKLLKALIDKEQPQLIILGKQAIDDDANQTGQMLAALAGLPQATFASKVQIDDGRASVTREVD
GGLETLSVKLPAVVTTDLRLNEPRYVTLPNIMKAKKKQLDTVKPEDLGVDVAPRLKTLKVAEPPKRSAGVMVPDVATLVA
KLKTEAKVL

Sequences:

>Translated_249_residues
MKVLVAVKRVIDYNVKVRVKADGSGVDLANVKMSMNPFDEIAVEEAVRLKEAGVATEVIAVSCGVAQCQETLRTAMAIGA
DRGILVETGEELQPLAVAKLLKALIDKEQPQLIILGKQAIDDDANQTGQMLAALAGLPQATFASKVQIDDGRASVTREVD
GGLETLSVKLPAVVTTDLRLNEPRYVTLPNIMKAKKKQLDTVKPEDLGVDVAPRLKTLKVAEPPKRSAGVMVPDVATLVA
KLKTEAKVL
>Mature_249_residues
MKVLVAVKRVIDYNVKVRVKADGSGVDLANVKMSMNPFDEIAVEEAVRLKEAGVATEVIAVSCGVAQCQETLRTAMAIGA
DRGILVETGEELQPLAVAKLLKALIDKEQPQLIILGKQAIDDDANQTGQMLAALAGLPQATFASKVQIDDGRASVTREVD
GGLETLSVKLPAVVTTDLRLNEPRYVTLPNIMKAKKKQLDTVKPEDLGVDVAPRLKTLKVAEPPKRSAGVMVPDVATLVA
KLKTEAKVL

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=247, Percent_Identity=63.5627530364373, Blast_Score=301, Evalue=3e-82,
Organism=Homo sapiens, GI62420877, Length=237, Percent_Identity=60.7594936708861, Blast_Score=276, Evalue=2e-74,
Organism=Escherichia coli, GI87081682, Length=231, Percent_Identity=27.7056277056277, Blast_Score=63, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI25141345, Length=253, Percent_Identity=54.9407114624506, Blast_Score=260, Evalue=6e-70,
Organism=Saccharomyces cerevisiae, GI6321646, Length=253, Percent_Identity=48.2213438735178, Blast_Score=224, Evalue=7e-60,
Organism=Drosophila melanogaster, GI24651147, Length=246, Percent_Identity=61.3821138211382, Blast_Score=271, Evalue=2e-73,
Organism=Drosophila melanogaster, GI24651145, Length=246, Percent_Identity=61.3821138211382, Blast_Score=271, Evalue=2e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 26582; Mature: 26582

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLVAVKRVIDYNVKVRVKADGSGVDLANVKMSMNPFDEIAVEEAVRLKEAGVATEVIA
CHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHH
VSCGVAQCQETLRTAMAIGADRGILVETGEELQPLAVAKLLKALIDKEQPQLIILGKQAI
HHCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECHHC
DDDANQTGQMLAALAGLPQATFASKVQIDDGRASVTREVDGGLETLSVKLPAVVTTDLRL
CCCCHHHHHHHHHHHCCCCCHHHCEEEECCCCHHEEHHHCCCEEEEEEEECEEEEECEEE
NEPRYVTLPNIMKAKKKQLDTVKPEDLGVDVAPRLKTLKVAEPPKRSAGVMVPDVATLVA
CCCCEEECCHHHHHHHHHCCCCCCHHCCCCCCCCCEEEECCCCCCCCCCEECCHHHHHHH
KLKTEAKVL
HHHHHHCCC
>Mature Secondary Structure
MKVLVAVKRVIDYNVKVRVKADGSGVDLANVKMSMNPFDEIAVEEAVRLKEAGVATEVIA
CHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHH
VSCGVAQCQETLRTAMAIGADRGILVETGEELQPLAVAKLLKALIDKEQPQLIILGKQAI
HHCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECHHC
DDDANQTGQMLAALAGLPQATFASKVQIDDGRASVTREVDGGLETLSVKLPAVVTTDLRL
CCCCHHHHHHHHHHHCCCCCHHHCEEEECCCCHHEEHHHCCCEEEEEEEECEEEEECEEE
NEPRYVTLPNIMKAKKKQLDTVKPEDLGVDVAPRLKTLKVAEPPKRSAGVMVPDVATLVA
CCCCEEECCHHHHHHHHHCCCCCCHHCCCCCCCCCEEEECCCCCCCCCCEECCHHHHHHH
KLKTEAKVL
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]