Definition | Nostoc sp. PCC 7120, complete genome. |
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Accession | NC_003272 |
Length | 6,413,771 |
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The map label for this gene is 17231007
Identifier: 17231007
GI number: 17231007
Start: 4235624
End: 4236538
Strand: Reverse
Name: 17231007
Synonym: all3515
Alternate gene names: NA
Gene position: 4236538-4235624 (Counterclockwise)
Preceding gene: 17231008
Following gene: 17231001
Centisome position: 66.05
GC content: 41.64
Gene sequence:
>915_bases ATGGCTTCATACAGCATTCAACTGGGGCAAGCATCTACTTCAGTCTTAGCGAGCTTGTTGGTGGCAGCACCACTAGCTCT ATCCAGCAATATTGCACCAGCGCAAGCTCATGGTAATCACACCCATGCTGATGAAACTGAGTTTTATATTGGGTTAGATG GTTTAAGAGTTCTGGCTAGTGGTACGTATGCGGGATTAGACAACCCTAATTACAATCGCCTAACATTTTTATACGCACAT CGGGAAGAAGATTTTACTACTAATCACTTTCACGGTATTGGAGCTTACAGCTATTCAGGGCCTTTAGGTAGTCCAAGTAT TAACCCGACAAATATAAATAATAGAATCCCTGAAACCTATACAGGACAAATACCTCTGCAATTATTGCCAGGTAAAGGAG CGTTTGCTGGTCGCTTGGTGAGTACTGCGACAGGGGCAGAATATAGCAATATCAAAATTGAAACTGTAGAAACTTTAGCC TCAGCTACAGATGCAGACGACCAGTATTTATTTAATAGTTCTGGCGGTCGTTGGCAATCATCTTTAGGAGGTGCAACAAT TGGTCTACAGTTGATTTCAATTAGTAGTGGATTAAATGTTGCTGACGAAGCAGGTGTAAATCTTTTCAATTCCGTCGGTG ATATTTATACCATCGGTACTGGTGATAATTTCACTTTCAGACCCAAGTTTTGGACTGATGCAGCCGCAGCACTAGGGAAA TACTCGGCAACATTCAAACTTGTGGATGTCAGTACAGATAGTAGTACTCCCTTGCTGGAGTCTGGTACATTTAGTTTCGA TTTCAGCGTTGAGCAAGTGCCTGAACCTTCAACAACTATTAGCTTAGGTCTATTAGGATTATTGGCGCTTTCTTTCTCTC GATTGAAGAAGCGGACGGTAAAAAGTTTGAATTAA
Upstream 100 bases:
>100_bases CTGGATGGATATTTGCTTCTTAATAAATTCTTCATTGACAGCCCCTTGCTGATTATGATAATCATTATCGGAAGTAAGTA TACTGTCAGAAATAAGTGAT
Downstream 100 bases:
>100_bases TGTTCTGGGACTGGGGACTGGGGACTGGGGACTGAGGACTGGGGACTGAGGACTGGGGACTGAGGACTGGGGACTGGGGA CTGGGGACTGGGTTAAAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MASYSIQLGQASTSVLASLLVAAPLALSSNIAPAQAHGNHTHADETEFYIGLDGLRVLASGTYAGLDNPNYNRLTFLYAH REEDFTTNHFHGIGAYSYSGPLGSPSINPTNINNRIPETYTGQIPLQLLPGKGAFAGRLVSTATGAEYSNIKIETVETLA SATDADDQYLFNSSGGRWQSSLGGATIGLQLISISSGLNVADEAGVNLFNSVGDIYTIGTGDNFTFRPKFWTDAAAALGK YSATFKLVDVSTDSSTPLLESGTFSFDFSVEQVPEPSTTISLGLLGLLALSFSRLKKRTVKSLN
Sequences:
>Translated_304_residues MASYSIQLGQASTSVLASLLVAAPLALSSNIAPAQAHGNHTHADETEFYIGLDGLRVLASGTYAGLDNPNYNRLTFLYAH REEDFTTNHFHGIGAYSYSGPLGSPSINPTNINNRIPETYTGQIPLQLLPGKGAFAGRLVSTATGAEYSNIKIETVETLA SATDADDQYLFNSSGGRWQSSLGGATIGLQLISISSGLNVADEAGVNLFNSVGDIYTIGTGDNFTFRPKFWTDAAAALGK YSATFKLVDVSTDSSTPLLESGTFSFDFSVEQVPEPSTTISLGLLGLLALSFSRLKKRTVKSLN >Mature_303_residues ASYSIQLGQASTSVLASLLVAAPLALSSNIAPAQAHGNHTHADETEFYIGLDGLRVLASGTYAGLDNPNYNRLTFLYAHR EEDFTTNHFHGIGAYSYSGPLGSPSINPTNINNRIPETYTGQIPLQLLPGKGAFAGRLVSTATGAEYSNIKIETVETLAS ATDADDQYLFNSSGGRWQSSLGGATIGLQLISISSGLNVADEAGVNLFNSVGDIYTIGTGDNFTFRPKFWTDAAAALGKY SATFKLVDVSTDSSTPLLESGTFSFDFSVEQVPEPSTTISLGLLGLLALSFSRLKKRTVKSLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32195; Mature: 32064
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASYSIQLGQASTSVLASLLVAAPLALSSNIAPAQAHGNHTHADETEFYIGLDGLRVLAS CCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEC GTYAGLDNPNYNRLTFLYAHREEDFTTNHFHGIGAYSYSGPLGSPSINPTNINNRIPETY CCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC TGQIPLQLLPGKGAFAGRLVSTATGAEYSNIKIETVETLASATDADDQYLFNSSGGRWQS CCCEEEEEECCCCCCHHHEEHHCCCCCCCCEEEEHHHHHHHCCCCCCCEEEECCCCCCHH SLGGATIGLQLISISSGLNVADEAGVNLFNSVGDIYTIGTGDNFTFRPKFWTDAAAALGK CCCCEEEEEEEEEECCCCCCHHHHCCHHHHCCCCEEEECCCCCEEECCCCCCHHHHHHCC YSATFKLVDVSTDSSTPLLESGTFSFDFSVEQVPEPSTTISLGLLGLLALSFSRLKKRTV CCEEEEEEEECCCCCCCEEECCCEEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH KSLN HCCC >Mature Secondary Structure ASYSIQLGQASTSVLASLLVAAPLALSSNIAPAQAHGNHTHADETEFYIGLDGLRVLAS CCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEC GTYAGLDNPNYNRLTFLYAHREEDFTTNHFHGIGAYSYSGPLGSPSINPTNINNRIPETY CCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC TGQIPLQLLPGKGAFAGRLVSTATGAEYSNIKIETVETLASATDADDQYLFNSSGGRWQS CCCEEEEEECCCCCCHHHEEHHCCCCCCCCEEEEHHHHHHHCCCCCCCEEEECCCCCCHH SLGGATIGLQLISISSGLNVADEAGVNLFNSVGDIYTIGTGDNFTFRPKFWTDAAAALGK CCCCEEEEEEEEEECCCCCCHHHHCCHHHHCCCCEEEECCCCCEEECCCCCCHHHHHHCC YSATFKLVDVSTDSSTPLLESGTFSFDFSVEQVPEPSTTISLGLLGLLALSFSRLKKRTV CCEEEEEEEECCCCCCCEEECCCEEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH KSLN HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA