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The map label for this gene is ytfH [H]

Identifier: 17230091

GI number: 17230091

Start: 3110333

End: 3110728

Strand: Direct

Name: ytfH [H]

Synonym: alr2599

Alternate gene names: 17230091

Gene position: 3110333-3110728 (Clockwise)

Preceding gene: 17230089

Following gene: 17230092

Centisome position: 48.49

GC content: 46.46

Gene sequence:

>396_bases
ATGAGTAATAACAATAATGATTCAAATACTCTGACACAACGCTTTGAAATGGGCGATCTTTTCGCCCAGCCATGTCCTTC
ACGAGACATCCTGAAACACGTTTGCAGTCGATGGGGCGTACTGATTCTGATTGCGCTGCGCCAAGGAACTCACAGATTTA
GCGAGTTGAGACGAAAAATAGGGGGAGTTAGTGAGAAAATGCTGGCTCAGAGTCTACAATCACTGACGGAAGATGGTTTT
GTTTTGCGTGTATCTCACCATGTAGTTCCACCTTTTGTTGAGTACAGCCTGACTCCGATGGGAGAAGAAGTCGCTGATCG
CATCGCCGCTTTAGCAGACTGGATTGAACTCAATACGCCAAGGGTTTTGGATGCAAGGAAGAAGGTGGAGAGATAG

Upstream 100 bases:

>100_bases
ATGACAATCATATTTTTTAGTTGGTTAATTTTTTGATGTCGATAAACCTAATATAATTGCTTTACTAACTTTTGGTAAGT
ACTAACAAAAAAGTAAGTAT

Downstream 100 bases:

>100_bases
CTAATTAAGTGACCCAATCGGGACTTTAGCAACAGAGGCGATCGCGTTGGTTGTGGTGGCTGCATATTAGAATTAAAGTC
ATTACCACGAACAGATTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MSNNNNDSNTLTQRFEMGDLFAQPCPSRDILKHVCSRWGVLILIALRQGTHRFSELRRKIGGVSEKMLAQSLQSLTEDGF
VLRVSHHVVPPFVEYSLTPMGEEVADRIAALADWIELNTPRVLDARKKVER

Sequences:

>Translated_131_residues
MSNNNNDSNTLTQRFEMGDLFAQPCPSRDILKHVCSRWGVLILIALRQGTHRFSELRRKIGGVSEKMLAQSLQSLTEDGF
VLRVSHHVVPPFVEYSLTPMGEEVADRIAALADWIELNTPRVLDARKKVER
>Mature_130_residues
SNNNNDSNTLTQRFEMGDLFAQPCPSRDILKHVCSRWGVLILIALRQGTHRFSELRRKIGGVSEKMLAQSLQSLTEDGFV
LRVSHHVVPPFVEYSLTPMGEEVADRIAALADWIELNTPRVLDARKKVER

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=117, Percent_Identity=70.0854700854701, Blast_Score=183, Evalue=4e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 14872; Mature: 14741

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNNNNDSNTLTQRFEMGDLFAQPCPSRDILKHVCSRWGVLILIALRQGTHRFSELRRKI
CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
GGVSEKMLAQSLQSLTEDGFVLRVSHHVVPPFVEYSLTPMGEEVADRIAALADWIELNTP
CCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
RVLDARKKVER
HHHHHHHHHCC
>Mature Secondary Structure 
SNNNNDSNTLTQRFEMGDLFAQPCPSRDILKHVCSRWGVLILIALRQGTHRFSELRRKI
CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
GGVSEKMLAQSLQSLTEDGFVLRVSHHVVPPFVEYSLTPMGEEVADRIAALADWIELNTP
CCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
RVLDARKKVER
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]