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The map label for this gene is sufD [C]

Identifier: 17229986

GI number: 17229986

Start: 2993999

End: 2995360

Strand: Direct

Name: sufD [C]

Synonym: alr2494

Alternate gene names: 17229986

Gene position: 2993999-2995360 (Clockwise)

Preceding gene: 17229985

Following gene: 17229987

Centisome position: 46.68

GC content: 45.59

Gene sequence:

>1362_bases
ATGACGATGCAAGTTTCTCCTAGTGCAATTGCTAACTCAGATGCGGTGAGTTTGACATCGAGTTTGTTGGATAGAGATAG
TTATTTGGTTAGTTTGTTGAATCAGGTAACTGTACCAGCGACAGAGGGATGGTTACAGGAATTACGTGGAAGTGCGGCGA
ATTGGGTGCGTCATTCAACTATTCCTACTACCCGTGAGGAAGAATGGCGGTTTACTGATTTGTCAGCTTTGCGACGGGTG
GAATTTCAGCAAGGGGAAGTAAAGCCAGCTGATATCTCGGCGCTGAGTTTGTCAGAAGCCGCAAATAACCGGTTGGTATT
TGTCAACGGTGTTTATGCGCCTGATTTATCAGCAGTTGCAGATTTACCTCCCGGTATAGTTGTAGATAATCTATCTGCGT
TACCCATCACCGAGCAGGAACGTGTACAAAAATATTTAGCACAATCGGAAGGTGCGTTAGAAGTATTCACCGCTTTGAAT
ACGGCTGGTATCTCTGATGTGGCTGTGGTGTTGGTGGCGAAGAATGTGATTGTGGAAACACCAATACATCTGGTATTTAT
TGCTGTGGCTGGTGAGACGGCGACAATTTCCCAACCCCGGTGTTTAGTGGTGGCGGAAAGTGGTTCTCAGGTGAGTGTAA
TTGAGGAGTTTGTTACCCCAAATGTAGACGAGGGGGTTTACCTAACCAACGCAGTTACGGAAATTACGATCGCCGACAAT
GCCCAAGTGGTTCACACTAGAGTTGAGAATGAAAGTAAGCAGGCTTTCCATATCGGGAAAACTGCGGTAACCCAGGCGCG
TTACAGTCGCTATACTTGTCACGCCGTAACTTTGGGTGGGAAAATATCACGCCATAATTTAGAGATTTTGCAGACTGGTG
AACAAACCGAAACTACTCTCAACGGTTTGACAATGGTAGCCACTAACCAATTAGCTGATACTCATAGTGCGATCGCACTC
AATCATCCTTATGGTACAAGTAAGCAATTACATAAATGTATTGTAGGCGATCGCGCTCACGCCGTCTTCAACGGTAAAGT
TTTCGTTCCCAAACCCGCACAGCTAACCGATGCAGCCCAGTTAAACCGCAACTTGCTGTTATCATCAAAAGCTAGAGTTG
ACACCAAACCCCAACTAGAAATTACCGCCGACAACGTAAAATGCGCCCACGGCGCAACCGTCAGCCAGTTGGAAGATGAT
GAAATATTCTACCTGCAAAGCCGGGGAATAGATGCTAACGACGCACGCAAGTTATTAGTAAACGCTTTCGCCGCCGAAAT
CATCAACCAAATTCCCGTACCTTCCTTGCGAGACAAATTACTAAACACTGTCACTAGTTTTAAATCTCTAACTAATGACT
AA

Upstream 100 bases:

>100_bases
GGCAGATAATTACTAGTGGTGGTAAGGAATTGGCACTAGAGTTAGAGTCTCGTGGTTATGACTGGCTGCTAGAAGATGCT
GCTGTTGAGGTGGGTGTGTA

Downstream 100 bases:

>100_bases
TGACTATGAGTATTGACTATTGACTAATTCCCCATGACTTATACACCTACCAAAACCCTTGCAGATAAAGTCCGCGCCGA
CTTCCCCATATTGCATCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 453; Mature: 452

Protein sequence:

>453_residues
MTMQVSPSAIANSDAVSLTSSLLDRDSYLVSLLNQVTVPATEGWLQELRGSAANWVRHSTIPTTREEEWRFTDLSALRRV
EFQQGEVKPADISALSLSEAANNRLVFVNGVYAPDLSAVADLPPGIVVDNLSALPITEQERVQKYLAQSEGALEVFTALN
TAGISDVAVVLVAKNVIVETPIHLVFIAVAGETATISQPRCLVVAESGSQVSVIEEFVTPNVDEGVYLTNAVTEITIADN
AQVVHTRVENESKQAFHIGKTAVTQARYSRYTCHAVTLGGKISRHNLEILQTGEQTETTLNGLTMVATNQLADTHSAIAL
NHPYGTSKQLHKCIVGDRAHAVFNGKVFVPKPAQLTDAAQLNRNLLLSSKARVDTKPQLEITADNVKCAHGATVSQLEDD
EIFYLQSRGIDANDARKLLVNAFAAEIINQIPVPSLRDKLLNTVTSFKSLTND

Sequences:

>Translated_453_residues
MTMQVSPSAIANSDAVSLTSSLLDRDSYLVSLLNQVTVPATEGWLQELRGSAANWVRHSTIPTTREEEWRFTDLSALRRV
EFQQGEVKPADISALSLSEAANNRLVFVNGVYAPDLSAVADLPPGIVVDNLSALPITEQERVQKYLAQSEGALEVFTALN
TAGISDVAVVLVAKNVIVETPIHLVFIAVAGETATISQPRCLVVAESGSQVSVIEEFVTPNVDEGVYLTNAVTEITIADN
AQVVHTRVENESKQAFHIGKTAVTQARYSRYTCHAVTLGGKISRHNLEILQTGEQTETTLNGLTMVATNQLADTHSAIAL
NHPYGTSKQLHKCIVGDRAHAVFNGKVFVPKPAQLTDAAQLNRNLLLSSKARVDTKPQLEITADNVKCAHGATVSQLEDD
EIFYLQSRGIDANDARKLLVNAFAAEIINQIPVPSLRDKLLNTVTSFKSLTND
>Mature_452_residues
TMQVSPSAIANSDAVSLTSSLLDRDSYLVSLLNQVTVPATEGWLQELRGSAANWVRHSTIPTTREEEWRFTDLSALRRVE
FQQGEVKPADISALSLSEAANNRLVFVNGVYAPDLSAVADLPPGIVVDNLSALPITEQERVQKYLAQSEGALEVFTALNT
AGISDVAVVLVAKNVIVETPIHLVFIAVAGETATISQPRCLVVAESGSQVSVIEEFVTPNVDEGVYLTNAVTEITIADNA
QVVHTRVENESKQAFHIGKTAVTQARYSRYTCHAVTLGGKISRHNLEILQTGEQTETTLNGLTMVATNQLADTHSAIALN
HPYGTSKQLHKCIVGDRAHAVFNGKVFVPKPAQLTDAAQLNRNLLLSSKARVDTKPQLEITADNVKCAHGATVSQLEDDE
IFYLQSRGIDANDARKLLVNAFAAEIINQIPVPSLRDKLLNTVTSFKSLTND

Specific function: FhuF function [C]

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=388, Percent_Identity=35.0515463917526, Blast_Score=209, Evalue=3e-55,
Organism=Escherichia coli, GI87081955, Length=318, Percent_Identity=24.8427672955975, Blast_Score=82, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 49027; Mature: 48896

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMQVSPSAIANSDAVSLTSSLLDRDSYLVSLLNQVTVPATEGWLQELRGSAANWVRHST
CCEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHCCCC
IPTTREEEWRFTDLSALRRVEFQQGEVKPADISALSLSEAANNRLVFVNGVYAPDLSAVA
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEHHHHCCCCEEEEECCCCCCCHHHH
DLPPGIVVDNLSALPITEQERVQKYLAQSEGALEVFTALNTAGISDVAVVLVAKNVIVET
CCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEHHHCCCCHHHHHHHHHHHHHHEEC
PIHLVFIAVAGETATISQPRCLVVAESGSQVSVIEEFVTPNVDEGVYLTNAVTEITIADN
CEEEEEEEEECCEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCEEEECCEEEEEEECC
AQVVHTRVENESKQAFHIGKTAVTQARYSRYTCHAVTLGGKISRHNLEILQTGEQTETTL
CEEEEEECCCCCCCEEECCHHHHHHHHHCCEEEEEEEECCEEECCCEEEEECCCHHHHHH
NGLTMVATNQLADTHSAIALNHPYGTSKQLHKCIVGDRAHAVFNGKVFVPKPAQLTDAAQ
CCEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEECCEEEECCCCCCCCHHH
LNRNLLLSSKARVDTKPQLEITADNVKCAHGATVSQLEDDEIFYLQSRGIDANDARKLLV
HCCCEEEECCCCCCCCCCEEEEECCEEECCCCCHHCCCCCCEEEEECCCCCHHHHHHHHH
NAFAAEIINQIPVPSLRDKLLNTVTSFKSLTND
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TMQVSPSAIANSDAVSLTSSLLDRDSYLVSLLNQVTVPATEGWLQELRGSAANWVRHST
CEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHCCCC
IPTTREEEWRFTDLSALRRVEFQQGEVKPADISALSLSEAANNRLVFVNGVYAPDLSAVA
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEHHHHCCCCEEEEECCCCCCCHHHH
DLPPGIVVDNLSALPITEQERVQKYLAQSEGALEVFTALNTAGISDVAVVLVAKNVIVET
CCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEHHHCCCCHHHHHHHHHHHHHHEEC
PIHLVFIAVAGETATISQPRCLVVAESGSQVSVIEEFVTPNVDEGVYLTNAVTEITIADN
CEEEEEEEEECCEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCEEEECCEEEEEEECC
AQVVHTRVENESKQAFHIGKTAVTQARYSRYTCHAVTLGGKISRHNLEILQTGEQTETTL
CEEEEEECCCCCCCEEECCHHHHHHHHHCCEEEEEEEECCEEECCCEEEEECCCHHHHHH
NGLTMVATNQLADTHSAIALNHPYGTSKQLHKCIVGDRAHAVFNGKVFVPKPAQLTDAAQ
CCEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEECCEEEECCCCCCCCHHH
LNRNLLLSSKARVDTKPQLEITADNVKCAHGATVSQLEDDEIFYLQSRGIDANDARKLLV
HCCCEEEECCCCCCCCCCEEEEECCEEECCCCCHHCCCCCCEEEEECCCCCHHHHHHHHH
NAFAAEIINQIPVPSLRDKLLNTVTSFKSLTND
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]