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The map label for this gene is ybjQ [C]

Identifier: 17229980

GI number: 17229980

Start: 2988902

End: 2989228

Strand: Direct

Name: ybjQ [C]

Synonym: alr2488

Alternate gene names: 17229980

Gene position: 2988902-2989228 (Clockwise)

Preceding gene: 17229978

Following gene: 17229981

Centisome position: 46.6

GC content: 41.28

Gene sequence:

>327_bases
ATGATTGTCACAACAACAGATGTAATTCAAGGTGCAGTAATTGATTCATATTTAGGTATTGTTACCGCAGAAATTGTCTA
TGGTAGCAATTTTCTCCGAGATTTTCTAGCTGGTATCCGTGATGTTATCGGTGGACGGACTGGCAGCTATGAACGTTTAT
TTGAGCAGGGACAACGTAAAGCCATAGAAGAATTAGAACTCCGGGCGCAACGTTTAGGAGCCAACGCTGTCATCGGTATT
GAAATAGACACCGGAACAATTAATGTAGACCAGTCAGGTGTTTTATTATTGATTACTGCAACAGGTACAGCAGTGAGAGT
ACGTTAG

Upstream 100 bases:

>100_bases
ACCATGACGACATAAATATTTAGTGTCAATCTTCCGATTGAGTATCAGCTTGATAAACTAGGAGCTAAGTTCCCTCATCA
GCAATTTCTCAGGAAAACTT

Downstream 100 bases:

>100_bases
GGCGGCTGAATACTCCATTTACATACACTGCGGTTATAGTTTCTTATTTATTAAGGATGGGTAATTGTTTAATATTATTA
CCCATTATTCAATATCAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MIVTTTDVIQGAVIDSYLGIVTAEIVYGSNFLRDFLAGIRDVIGGRTGSYERLFEQGQRKAIEELELRAQRLGANAVIGI
EIDTGTINVDQSGVLLLITATGTAVRVR

Sequences:

>Translated_108_residues
MIVTTTDVIQGAVIDSYLGIVTAEIVYGSNFLRDFLAGIRDVIGGRTGSYERLFEQGQRKAIEELELRAQRLGANAVIGI
EIDTGTINVDQSGVLLLITATGTAVRVR
>Mature_108_residues
MIVTTTDVIQGAVIDSYLGIVTAEIVYGSNFLRDFLAGIRDVIGGRTGSYERLFEQGQRKAIEELELRAQRLGANAVIGI
EIDTGTINVDQSGVLLLITATGTAVRVR

Specific function: Unknown

COG id: COG0393

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0145 family

Homologues:

Organism=Escherichia coli, GI1787091, Length=108, Percent_Identity=45.3703703703704, Blast_Score=100, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2488_NOSS1 (Q8YU66)

Other databases:

- EMBL:   BA000019
- PIR:   AI2116
- RefSeq:   NP_486528.1
- ProteinModelPortal:   Q8YU66
- SMR:   Q8YU66
- STRING:   Q8YU66
- GeneID:   1106085
- GenomeReviews:   BA000019_GR
- KEGG:   ana:alr2488
- NMPDR:   fig|103690.1.peg.2795
- eggNOG:   COG0393
- HOGENOM:   HBG339160
- OMA:   DFEISMP
- PhylomeDB:   Q8YU66
- ProtClustDB:   CLSK892803
- BioCyc:   NSP103690:ALR2488-MONOMER
- HAMAP:   MF_00338
- InterPro:   IPR002765
- Gene3D:   G3DSA:3.30.110.70

Pfam domain/function: PF01906 DUF74

EC number: NA

Molecular weight: Translated: 11626; Mature: 11626

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVTTTDVIQGAVIDSYLGIVTAEIVYGSNFLRDFLAGIRDVIGGRTGSYERLFEQGQRK
CEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
AIEELELRAQRLGANAVIGIEIDTGTINVDQSGVLLLITATGTAVRVR
HHHHHHHHHHHCCCCEEEEEEECCCEEEECCCCEEEEEEECCEEEEEC
>Mature Secondary Structure
MIVTTTDVIQGAVIDSYLGIVTAEIVYGSNFLRDFLAGIRDVIGGRTGSYERLFEQGQRK
CEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
AIEELELRAQRLGANAVIGIEIDTGTINVDQSGVLLLITATGTAVRVR
HHHHHHHHHHHCCCCEEEEEEECCCEEEECCCCEEEEEEECCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840