Click here to switch to the map view.

The map label for this gene is 17229981

Identifier: 17229981

GI number: 17229981

Start: 2989588

End: 2990223

Strand: Direct

Name: 17229981

Synonym: alr2489

Alternate gene names: NA

Gene position: 2989588-2990223 (Clockwise)

Preceding gene: 17229980

Following gene: 17229984

Centisome position: 46.61

GC content: 46.54

Gene sequence:

>636_bases
ATGTCATACGTCAATAGAGTAGGCGACGATGTTATTCAACCTGAACCTACGGTGGTGGGAAGAGTAGGTGATTACCATGA
CCGTGTGCGTTGGGGCCCGATAATTTCTGGTGTATTAGTTGCTTTAGCTACTCAACTAATCTTGAGCGCTTTATTTGGTG
CAATTGGTGCTGGTACAGTTTCCGGCTCAGGCGCACCTAGAACAATTGCGCCTAATGTTGCAGGCAATGTAGGACTTTGG
TCAACTATTGCTTTGTTGATTTCTCTGTTTACTGGTGGTTGGGTAACAGCACGGGCCTGTGGTCCAATGAACCGAAATAC
AGCACTACTTAACGGCGCAATTCTTTGGGCGACCACTTTAGCACTTAGCTCATGGTTATTAGCCAGTGGAGTATCGGGTG
CTTTCGGTGTTGCAGCTTCTAACGCAGGAGAAGTCATCAACCAAGTGCAACAACCAGGTGCTGCAATACCACAAAATGTA
CCTAACGTTACAGCCGAACAAGCTCGTGATATTGCGGCCGCAACTTCTAGAGGTTTGTGGTGGTTTGTATTTGGTTCTTT
ATTAGGTTTAGTTGCTTCCATGATAGGTGCAGCCGCAGGAGTTCGCAATCCTCGCTCTAACAATTACAACGCTTAA

Upstream 100 bases:

>100_bases
TAGATATTAAAATCTGCAATTAGCCATTTAATTTTAACGTAAGCATAAAAATTAAGAAAAATTTTGCTGAAGTTAAAGTA
GTCAGGAGAAATAAAGACTT

Downstream 100 bases:

>100_bases
TGCCAGCTTAATATATCCTGTACAGTTAAGGTACGGAAAAAAGATTAACCGCAGATAAATATTAATCTTCGTAGGGACGC
ACTCTTGTACGTCCCTATCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MSYVNRVGDDVIQPEPTVVGRVGDYHDRVRWGPIISGVLVALATQLILSALFGAIGAGTVSGSGAPRTIAPNVAGNVGLW
STIALLISLFTGGWVTARACGPMNRNTALLNGAILWATTLALSSWLLASGVSGAFGVAASNAGEVINQVQQPGAAIPQNV
PNVTAEQARDIAAATSRGLWWFVFGSLLGLVASMIGAAAGVRNPRSNNYNA

Sequences:

>Translated_211_residues
MSYVNRVGDDVIQPEPTVVGRVGDYHDRVRWGPIISGVLVALATQLILSALFGAIGAGTVSGSGAPRTIAPNVAGNVGLW
STIALLISLFTGGWVTARACGPMNRNTALLNGAILWATTLALSSWLLASGVSGAFGVAASNAGEVINQVQQPGAAIPQNV
PNVTAEQARDIAAATSRGLWWFVFGSLLGLVASMIGAAAGVRNPRSNNYNA
>Mature_210_residues
SYVNRVGDDVIQPEPTVVGRVGDYHDRVRWGPIISGVLVALATQLILSALFGAIGAGTVSGSGAPRTIAPNVAGNVGLWS
TIALLISLFTGGWVTARACGPMNRNTALLNGAILWATTLALSSWLLASGVSGAFGVAASNAGEVINQVQQPGAAIPQNVP
NVTAEQARDIAAATSRGLWWFVFGSLLGLVASMIGAAAGVRNPRSNNYNA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21607; Mature: 21476

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYVNRVGDDVIQPEPTVVGRVGDYHDRVRWGPIISGVLVALATQLILSALFGAIGAGTV
CCHHHHHCCHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SGSGAPRTIAPNVAGNVGLWSTIALLISLFTGGWVTARACGPMNRNTALLNGAILWATTL
CCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHH
ALSSWLLASGVSGAFGVAASNAGEVINQVQQPGAAIPQNVPNVTAEQARDIAAATSRGLW
HHHHHHHHHCCCCHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCHH
WFVFGSLLGLVASMIGAAAGVRNPRSNNYNA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SYVNRVGDDVIQPEPTVVGRVGDYHDRVRWGPIISGVLVALATQLILSALFGAIGAGTV
CHHHHHCCHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SGSGAPRTIAPNVAGNVGLWSTIALLISLFTGGWVTARACGPMNRNTALLNGAILWATTL
CCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHH
ALSSWLLASGVSGAFGVAASNAGEVINQVQQPGAAIPQNVPNVTAEQARDIAAATSRGLW
HHHHHHHHHCCCCHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCHH
WFVFGSLLGLVASMIGAAAGVRNPRSNNYNA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA