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The map label for this gene is ybbK [C]

Identifier: 17229964

GI number: 17229964

Start: 2969814

End: 2970782

Strand: Direct

Name: ybbK [C]

Synonym: alr2472

Alternate gene names: 17229964

Gene position: 2969814-2970782 (Clockwise)

Preceding gene: 17229963

Following gene: 17229966

Centisome position: 46.3

GC content: 45.3

Gene sequence:

>969_bases
ATGGAACAGTTATTTTTATTGATTGCTTTAGCGCTCGGTGGTTCTGCCGTTGCGGGGTCTGTGAAGGTGATTAATCAAGG
TAATGAAGTTTTAGTAGAAAGATTAGGTAGCTACCACAAAAAGCTAGGCCCAGGACTAAATCTTGTCCTTCCTTTTATAG
ATAAAGCCGTCTACAAAGAAACTATCCGCGAAAAGGTTTTAGATATTCCACCCCAAAAATGTATTACCCGCGACAACGTA
GGAATTGAAGTAGACGCAGTGGTTTACTGGCGAATTGTCGATATGGAAAAGGCTTGGTACAAAGTAGAAAACCTCCACTC
GGCAATGGTGAATATGGTGCTGACCCAAATTCGCTCGGAAATGGGACAGTTGGAGTTAGATCAAACCTTTACGGCTCGTT
CCCAAATTAATGAACTTTTATTACGGGAATTGGATATTGCCACTGATCCTTGGGGTGTAAAAGTCACAAGGGTAGAACTG
CGAGATATTATTCCTTCCCAAGCTGTGCGGGAATCGATGGAATTGCAAATGTCAGCCGAACGACGCAGACGAGCAGCAAT
TTTAAATTCAGAGGGTGAGAGGGAAGCGGCTGTCAATTCTGCCAGAGGTAAGGCCGAAGCCCAAATATTAGATGCGGAAG
CCAGGCAAAAGTCGGTAATCTTACAAGCAGAGGCGGAACAAAAAGCGATCGTTCTCAAAGCTCAGGCTGAACGTCAGCAA
CAAGTTCTCAAAGCTCAGGCTATTGCCGAATCAGCAGAAATTCTTGCCCAGAAAATCAGTTCCAATGGTACTGCTGAACA
AGCCCTAGAGGTGTTATTGGCTTTGGGTTATCTCGATATGGGCGCAACCATCGGTAAGAGCGATAGCAGTAAAGTCATGT
TTATGGACCCCCGCGCTATTCCCGCTACTTTAGAGGGTATTCGCTCGATTGTTTCGGATAGTCAGTCGTCAGTGGTCAGT
GGTCAGTAG

Upstream 100 bases:

>100_bases
TGTTTAAAACCCTTATACCCACTCTCAACAGACAGCCTGGGCGCGTAAGTCCTAATTAACAGTTGGTTATAACTTATACA
GAAATATTTAGAGGTTGGCA

Downstream 100 bases:

>100_bases
TTTCGGCTATTGACTAAATTTCACTCGCGTGATTCATTTGGCACTTACCACACAAACCGAAAAACTCCAGAGTGTGGTAG
AAAATCTTAAACTTATGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MEQLFLLIALALGGSAVAGSVKVINQGNEVLVERLGSYHKKLGPGLNLVLPFIDKAVYKETIREKVLDIPPQKCITRDNV
GIEVDAVVYWRIVDMEKAWYKVENLHSAMVNMVLTQIRSEMGQLELDQTFTARSQINELLLRELDIATDPWGVKVTRVEL
RDIIPSQAVRESMELQMSAERRRRAAILNSEGEREAAVNSARGKAEAQILDAEARQKSVILQAEAEQKAIVLKAQAERQQ
QVLKAQAIAESAEILAQKISSNGTAEQALEVLLALGYLDMGATIGKSDSSKVMFMDPRAIPATLEGIRSIVSDSQSSVVS
GQ

Sequences:

>Translated_322_residues
MEQLFLLIALALGGSAVAGSVKVINQGNEVLVERLGSYHKKLGPGLNLVLPFIDKAVYKETIREKVLDIPPQKCITRDNV
GIEVDAVVYWRIVDMEKAWYKVENLHSAMVNMVLTQIRSEMGQLELDQTFTARSQINELLLRELDIATDPWGVKVTRVEL
RDIIPSQAVRESMELQMSAERRRRAAILNSEGEREAAVNSARGKAEAQILDAEARQKSVILQAEAEQKAIVLKAQAERQQ
QVLKAQAIAESAEILAQKISSNGTAEQALEVLLALGYLDMGATIGKSDSSKVMFMDPRAIPATLEGIRSIVSDSQSSVVS
GQ
>Mature_322_residues
MEQLFLLIALALGGSAVAGSVKVINQGNEVLVERLGSYHKKLGPGLNLVLPFIDKAVYKETIREKVLDIPPQKCITRDNV
GIEVDAVVYWRIVDMEKAWYKVENLHSAMVNMVLTQIRSEMGQLELDQTFTARSQINELLLRELDIATDPWGVKVTRVEL
RDIIPSQAVRESMELQMSAERRRRAAILNSEGEREAAVNSARGKAEAQILDAEARQKSVILQAEAEQKAIVLKAQAERQQ
QVLKAQAIAESAEILAQKISSNGTAEQALEVLLALGYLDMGATIGKSDSSKVMFMDPRAIPATLEGIRSIVSDSQSSVVS
GQ

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI7305503, Length=196, Percent_Identity=42.8571428571429, Blast_Score=177, Evalue=1e-44,
Organism=Homo sapiens, GI21686995, Length=196, Percent_Identity=38.265306122449, Blast_Score=105, Evalue=7e-23,
Organism=Homo sapiens, GI221316744, Length=196, Percent_Identity=38.265306122449, Blast_Score=105, Evalue=7e-23,
Organism=Homo sapiens, GI38016911, Length=214, Percent_Identity=33.1775700934579, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI7657615, Length=181, Percent_Identity=25.9668508287293, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI20149563, Length=157, Percent_Identity=28.6624203821656, Blast_Score=66, Evalue=5e-11,
Organism=Escherichia coli, GI1786697, Length=313, Percent_Identity=39.297124600639, Blast_Score=218, Evalue=3e-58,
Organism=Caenorhabditis elegans, GI32564147, Length=298, Percent_Identity=36.241610738255, Blast_Score=171, Evalue=6e-43,
Organism=Caenorhabditis elegans, GI17569493, Length=191, Percent_Identity=33.5078534031414, Blast_Score=98, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI193209764, Length=191, Percent_Identity=33.5078534031414, Blast_Score=97, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI17569497, Length=199, Percent_Identity=32.1608040201005, Blast_Score=95, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI25153583, Length=162, Percent_Identity=33.3333333333333, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI71987612, Length=167, Percent_Identity=33.5329341317365, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17569499, Length=166, Percent_Identity=32.5301204819277, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI71989948, Length=184, Percent_Identity=37.5, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI71989955, Length=184, Percent_Identity=37.5, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI71987621, Length=167, Percent_Identity=33.5329341317365, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI32566490, Length=150, Percent_Identity=32, Blast_Score=84, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI193210507, Length=199, Percent_Identity=32.6633165829146, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17570161, Length=199, Percent_Identity=32.6633165829146, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17570459, Length=197, Percent_Identity=32.994923857868, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI45550506, Length=267, Percent_Identity=36.3295880149813, Blast_Score=170, Evalue=9e-43,
Organism=Drosophila melanogaster, GI45556022, Length=178, Percent_Identity=35.3932584269663, Blast_Score=103, Evalue=1e-22,
Organism=Drosophila melanogaster, GI62484448, Length=169, Percent_Identity=34.3195266272189, Blast_Score=101, Evalue=8e-22,
Organism=Drosophila melanogaster, GI24657857, Length=169, Percent_Identity=34.3195266272189, Blast_Score=101, Evalue=8e-22,
Organism=Drosophila melanogaster, GI281365664, Length=169, Percent_Identity=34.3195266272189, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI62484274, Length=169, Percent_Identity=34.3195266272189, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI18860517, Length=197, Percent_Identity=32.48730964467, Blast_Score=88, Evalue=7e-18,
Organism=Drosophila melanogaster, GI21356845, Length=191, Percent_Identity=29.3193717277487, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI28573263, Length=193, Percent_Identity=27.979274611399, Blast_Score=81, Evalue=8e-16,
Organism=Drosophila melanogaster, GI281361631, Length=195, Percent_Identity=28.7179487179487, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI281361633, Length=195, Percent_Identity=28.7179487179487, Blast_Score=80, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 35390; Mature: 35390

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS01270 BAND_7

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQLFLLIALALGGSAVAGSVKVINQGNEVLVERLGSYHKKLGPGLNLVLPFIDKAVYKE
CHHHHHHHHHHHCCCHHCCCEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
TIREKVLDIPPQKCITRDNVGIEVDAVVYWRIVDMEKAWYKVENLHSAMVNMVLTQIRSE
HHHHHHHCCCCHHHCCCCCCCEEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
MGQLELDQTFTARSQINELLLRELDIATDPWGVKVTRVELRDIIPSQAVRESMELQMSAE
HCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHH
RRRRAAILNSEGEREAAVNSARGKAEAQILDAEARQKSVILQAEAEQKAIVLKAQAERQQ
HHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHEEEEECCCCCEEEEEHHHHHHH
QVLKAQAIAESAEILAQKISSNGTAEQALEVLLALGYLDMGATIGKSDSSKVMFMDPRAI
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCC
PATLEGIRSIVSDSQSSVVSGQ
HHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MEQLFLLIALALGGSAVAGSVKVINQGNEVLVERLGSYHKKLGPGLNLVLPFIDKAVYKE
CHHHHHHHHHHHCCCHHCCCEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
TIREKVLDIPPQKCITRDNVGIEVDAVVYWRIVDMEKAWYKVENLHSAMVNMVLTQIRSE
HHHHHHHCCCCHHHCCCCCCCEEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
MGQLELDQTFTARSQINELLLRELDIATDPWGVKVTRVELRDIIPSQAVRESMELQMSAE
HCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHH
RRRRAAILNSEGEREAAVNSARGKAEAQILDAEARQKSVILQAEAEQKAIVLKAQAERQQ
HHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHEEEEECCCCCEEEEEHHHHHHH
QVLKAQAIAESAEILAQKISSNGTAEQALEVLLALGYLDMGATIGKSDSSKVMFMDPRAI
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCC
PATLEGIRSIVSDSQSSVVSGQ
HHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]