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The map label for this gene is 17229963

Identifier: 17229963

GI number: 17229963

Start: 2969202

End: 2969639

Strand: Direct

Name: 17229963

Synonym: alr2471

Alternate gene names: NA

Gene position: 2969202-2969639 (Clockwise)

Preceding gene: 17229960

Following gene: 17229964

Centisome position: 46.29

GC content: 44.75

Gene sequence:

>438_bases
ATGCCAATATCTACCTTAATCTGGCTACTGGCTGGAGCAATTCTCTGCTTAACAGAATTGTTCTTACCATCGGCGTTTAT
CGCCTTCATGATGGGAATTAGCGCCTTAATGGTGGCGTTACTATCTCAATTGGGGTTAGCTTTATGGCTGCAAGTTGTGG
CTTGGTTGTTTCTTTCTACCGTTTTGATTGCACTTTCCCGCCGATTTTTGCAACCACGACAACGTAGGTCAAAAATTCAA
GATGCAATTACGGCGGAAACCTTAACAGAAATTCTCCCCGGACAAGCAGGACGAGTATTATACGAAGGAAATTCTTGGCG
GGCAAAGTGCGACGACGAGCAAATCACTATCGCTGCTCACCAAAGGGTTTATGTAGTCAGGAGGGAAGGCACTACTTTAG
TGGTGATGCCTGAAAATTTGCTGCATTTTAGTCACTAG

Upstream 100 bases:

>100_bases
ATGTTTGATTACCAATTACCAATCACCAATTACCAATCACCAAATCCAGATAACCAGCGACTAAGTTGGTTTGTGTGAAT
GTAGTGTCTAGGATGGCGCT

Downstream 100 bases:

>100_bases
TCATTAACTAGACTTACGCATGAAAATGAAAAATCAAGGGTTTGGATAAGGGTACAGGGGTTTAGGGGTGTAAATGTTTA
AAACCCTTATACCCACTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: Nodulation Efficiency Family Protein; Nodulation Efficiency Protein NfeD

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MPISTLIWLLAGAILCLTELFLPSAFIAFMMGISALMVALLSQLGLALWLQVVAWLFLSTVLIALSRRFLQPRQRRSKIQ
DAITAETLTEILPGQAGRVLYEGNSWRAKCDDEQITIAAHQRVYVVRREGTTLVVMPENLLHFSH

Sequences:

>Translated_145_residues
MPISTLIWLLAGAILCLTELFLPSAFIAFMMGISALMVALLSQLGLALWLQVVAWLFLSTVLIALSRRFLQPRQRRSKIQ
DAITAETLTEILPGQAGRVLYEGNSWRAKCDDEQITIAAHQRVYVVRREGTTLVVMPENLLHFSH
>Mature_144_residues
PISTLIWLLAGAILCLTELFLPSAFIAFMMGISALMVALLSQLGLALWLQVVAWLFLSTVLIALSRRFLQPRQRRSKIQD
AITAETLTEILPGQAGRVLYEGNSWRAKCDDEQITIAAHQRVYVVRREGTTLVVMPENLLHFSH

Specific function: Unknown

COG id: COG1585

COG function: function code OU; Membrane protein implicated in regulation of membrane protease activity

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16277; Mature: 16145

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPISTLIWLLAGAILCLTELFLPSAFIAFMMGISALMVALLSQLGLALWLQVVAWLFLST
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLIALSRRFLQPRQRRSKIQDAITAETLTEILPGQAGRVLYEGNSWRAKCDDEQITIAAH
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEEC
QRVYVVRREGTTLVVMPENLLHFSH
CEEEEEEECCCEEEEECHHHHCCCC
>Mature Secondary Structure 
PISTLIWLLAGAILCLTELFLPSAFIAFMMGISALMVALLSQLGLALWLQVVAWLFLST
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLIALSRRFLQPRQRRSKIQDAITAETLTEILPGQAGRVLYEGNSWRAKCDDEQITIAAH
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEEC
QRVYVVRREGTTLVVMPENLLHFSH
CEEEEEEECCCEEEEECHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA