| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17228761
Identifier: 17228761
GI number: 17228761
Start: 1501754
End: 1503553
Strand: Direct
Name: 17228761
Synonym: alr1266
Alternate gene names: NA
Gene position: 1501754-1503553 (Clockwise)
Preceding gene: 17228759
Following gene: 17228765
Centisome position: 23.41
GC content: 33.06
Gene sequence:
>1800_bases ATGAGCATTACACCTCGTGGAATGAGTGTTACAGAAGCTTATCGTCTCTATCGTTCAGGCAGTTTATTGGTGAATAGGAA GTATCAAAGAAAGCTTGTTTGGACAGTTTTGGAAAAAGAAAAATTAATTGGAAGTATTTTAAAAGGATATCCTATCCCGT TGATTCTACTAGCAGAACGCCCTCAGATACACGGTAGTGGCAAATATGAAATTATTGATGGAATGCAACGTCTTAATGCA ATTTTTAGTTATATTGAAAATTCATTTAGTTTTGATATCCAATATTTCGATATAGATGAGTTTTCTTATGCTAAACAATT AGCTAATGATGGCATTATTGAAATTATAAGTAACAATAAAGATAACGAAAAACAACAACTAAAGTTGCTGTCTGGTAAAG AATGTGCTGATATTTTAGATTATCAACTTGCAGTAACAGTATATACTGCGATGGCAGAAGAAGATATCACAGAAGTATTT GGGCGTATTAATTCTAGTGGTAAACATTTAAGTAGCCAAGAAAAAAGACAAGCTGGTGTAACTACTGCATTCGCAGAATT AGTAAGAACAATATCTATGGAGCTACGTGGAGACGTTTCAGATAAAGTACTACGTCTTACTGATATGCCAGAAATAAGTA TTGATTCACAAAAAAATAATCAAGGTTATAAGATTAAGGCTGAAGATACAATATGGTGTAAACAAGGGGCTTTAACTGCA AAGTTACTACGTGAAAGTGAAGATGAACAAATGATAGCTGATATTTTAGCCTCTATTTTACTAAATGAACCTTTACCAGT TAGCACCGAACGTTTAGATAGTTTATATGATTTGAGCAGCAAATATTCTCAGGTTTTAGATAGCGCCTTAGCAACATATG GATTTAAAAAATTGACTCAGGATATAATCACAACATTTGCTGTGATGCGAGAAAGTATAGAAGCGTATAGTTCAGAAGCA AAAGCTTTATTACGTGTTGTCAATCCAAATAGTAATAATCCAATACGAACAGCATTTTACACTATTTTTATGGCTTTTTT CGACTTAGTGATTCGGAAAGGACTTTCTCCTGTTGATCCGGAAGGGATAATGAATGGTCTTCGAGGACTTCAGAAAAAAT TGGATTTGAGTAGTCATTACACAACAACAGATGATCGTAAAAGTAACATTAAGCAAACCATAGGTCTTATTCAAGATTGT TTTGCCAAAAAAGAACCATCGGCTTTAGGACATGGTGTTGAACTTGTTCTTGATCTTGAAAACTCATTGCGTCGTTCTCG TATAGAAACTTCAAGATATGAATGTAAGCAAGGATTACTCGATTTATCAGCGAAGAGAAACTTAAATAAAGCTTTACTAG AAAGAATTGTTGAAACTATTTGTGGTATTGCAAACTTAGGCTCAGAGACCGATGGATATATTCATATTGGTATTACAGAT TGTGAAAAAGATGCTCATAGAATAGAGGAATTAGACAACATAAAATCGATAGAAATTAATGGAAGATATGTTGTAGGAAT TGATAGAGAAGCAAGGCTACAAAATCAGACTGTAGAACAATATGTTAGAGTATTGACTAATGTAATTCACAATTCTTCAC TAACTGATCCCTTGAAAACACAAATATTAACCAAGTTTGATACAATATCATATAAAGGTTTTTCTGTGATTAGAATTACC ATTCCAGTTCAAACTGATGTTTCATTTCTTGGGGAAAAAGTTTTTTCTAGAAAAGATTCCTCTACAGTAGAAGTACATGG GCGTGAGTTACTAGCTATTTCTAAGCTTTTTCAAAAATGA
Upstream 100 bases:
>100_bases GCGACCATAACCCAATCTTAAGAAAATATTCAAGTATCAAATACAACTTATGAATATCGTATAATTTTTCAGTGTAAATA TAATTTTAAAAACACTAAGT
Downstream 100 bases:
>100_bases AAATTTGATTTTGATAAGGTGGGCATTACACCCACCCTAATCAAGCTATATTAACAAAGCTTGCTCCTCCTGAGAAATCA CCCGCCCTTCATCCTCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 599; Mature: 598
Protein sequence:
>599_residues MSITPRGMSVTEAYRLYRSGSLLVNRKYQRKLVWTVLEKEKLIGSILKGYPIPLILLAERPQIHGSGKYEIIDGMQRLNA IFSYIENSFSFDIQYFDIDEFSYAKQLANDGIIEIISNNKDNEKQQLKLLSGKECADILDYQLAVTVYTAMAEEDITEVF GRINSSGKHLSSQEKRQAGVTTAFAELVRTISMELRGDVSDKVLRLTDMPEISIDSQKNNQGYKIKAEDTIWCKQGALTA KLLRESEDEQMIADILASILLNEPLPVSTERLDSLYDLSSKYSQVLDSALATYGFKKLTQDIITTFAVMRESIEAYSSEA KALLRVVNPNSNNPIRTAFYTIFMAFFDLVIRKGLSPVDPEGIMNGLRGLQKKLDLSSHYTTTDDRKSNIKQTIGLIQDC FAKKEPSALGHGVELVLDLENSLRRSRIETSRYECKQGLLDLSAKRNLNKALLERIVETICGIANLGSETDGYIHIGITD CEKDAHRIEELDNIKSIEINGRYVVGIDREARLQNQTVEQYVRVLTNVIHNSSLTDPLKTQILTKFDTISYKGFSVIRIT IPVQTDVSFLGEKVFSRKDSSTVEVHGRELLAISKLFQK
Sequences:
>Translated_599_residues MSITPRGMSVTEAYRLYRSGSLLVNRKYQRKLVWTVLEKEKLIGSILKGYPIPLILLAERPQIHGSGKYEIIDGMQRLNA IFSYIENSFSFDIQYFDIDEFSYAKQLANDGIIEIISNNKDNEKQQLKLLSGKECADILDYQLAVTVYTAMAEEDITEVF GRINSSGKHLSSQEKRQAGVTTAFAELVRTISMELRGDVSDKVLRLTDMPEISIDSQKNNQGYKIKAEDTIWCKQGALTA KLLRESEDEQMIADILASILLNEPLPVSTERLDSLYDLSSKYSQVLDSALATYGFKKLTQDIITTFAVMRESIEAYSSEA KALLRVVNPNSNNPIRTAFYTIFMAFFDLVIRKGLSPVDPEGIMNGLRGLQKKLDLSSHYTTTDDRKSNIKQTIGLIQDC FAKKEPSALGHGVELVLDLENSLRRSRIETSRYECKQGLLDLSAKRNLNKALLERIVETICGIANLGSETDGYIHIGITD CEKDAHRIEELDNIKSIEINGRYVVGIDREARLQNQTVEQYVRVLTNVIHNSSLTDPLKTQILTKFDTISYKGFSVIRIT IPVQTDVSFLGEKVFSRKDSSTVEVHGRELLAISKLFQK >Mature_598_residues SITPRGMSVTEAYRLYRSGSLLVNRKYQRKLVWTVLEKEKLIGSILKGYPIPLILLAERPQIHGSGKYEIIDGMQRLNAI FSYIENSFSFDIQYFDIDEFSYAKQLANDGIIEIISNNKDNEKQQLKLLSGKECADILDYQLAVTVYTAMAEEDITEVFG RINSSGKHLSSQEKRQAGVTTAFAELVRTISMELRGDVSDKVLRLTDMPEISIDSQKNNQGYKIKAEDTIWCKQGALTAK LLRESEDEQMIADILASILLNEPLPVSTERLDSLYDLSSKYSQVLDSALATYGFKKLTQDIITTFAVMRESIEAYSSEAK ALLRVVNPNSNNPIRTAFYTIFMAFFDLVIRKGLSPVDPEGIMNGLRGLQKKLDLSSHYTTTDDRKSNIKQTIGLIQDCF AKKEPSALGHGVELVLDLENSLRRSRIETSRYECKQGLLDLSAKRNLNKALLERIVETICGIANLGSETDGYIHIGITDC EKDAHRIEELDNIKSIEINGRYVVGIDREARLQNQTVEQYVRVLTNVIHNSSLTDPLKTQILTKFDTISYKGFSVIRITI PVQTDVSFLGEKVFSRKDSSTVEVHGRELLAISKLFQK
Specific function: Unknown
COG id: COG1479
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67569; Mature: 67438
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSITPRGMSVTEAYRLYRSGSLLVNRKYQRKLVWTVLEKEKLIGSILKGYPIPLILLAER CCCCCCCCHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC PQIHGSGKYEIIDGMQRLNAIFSYIENSFSFDIQYFDIDEFSYAKQLANDGIIEIISNNK CCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECHHHHHHHHHCCCCEEEEECCCC DNEKQQLKLLSGKECADILDYQLAVTVYTAMAEEDITEVFGRINSSGKHLSSQEKRQAGV CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH TTAFAELVRTISMELRGDVSDKVLRLTDMPEISIDSQKNNQGYKIKAEDTIWCKQGALTA HHHHHHHHHHHHHHHCCCCHHHHEEECCCCCCCCCCCCCCCCCEEEECCCEEECCCCHHH KLLRESEDEQMIADILASILLNEPLPVSTERLDSLYDLSSKYSQVLDSALATYGFKKLTQ HHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIITTFAVMRESIEAYSSEAKALLRVVNPNSNNPIRTAFYTIFMAFFDLVIRKGLSPVDP HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCH EGIMNGLRGLQKKLDLSSHYTTTDDRKSNIKQTIGLIQDCFAKKEPSALGHGVELVLDLE HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCEEEEEECH NSLRRSRIETSRYECKQGLLDLSAKRNLNKALLERIVETICGIANLGSETDGYIHIGITD HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC CEKDAHRIEELDNIKSIEINGRYVVGIDREARLQNQTVEQYVRVLTNVIHNSSLTDPLKT CHHHHHHHHHHCCCCEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH QILTKFDTISYKGFSVIRITIPVQTDVSFLGEKVFSRKDSSTVEVHGRELLAISKLFQK HHHHHHHCEEECCEEEEEEEEECCCCHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHCC >Mature Secondary Structure SITPRGMSVTEAYRLYRSGSLLVNRKYQRKLVWTVLEKEKLIGSILKGYPIPLILLAER CCCCCCCHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC PQIHGSGKYEIIDGMQRLNAIFSYIENSFSFDIQYFDIDEFSYAKQLANDGIIEIISNNK CCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECHHHHHHHHHCCCCEEEEECCCC DNEKQQLKLLSGKECADILDYQLAVTVYTAMAEEDITEVFGRINSSGKHLSSQEKRQAGV CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH TTAFAELVRTISMELRGDVSDKVLRLTDMPEISIDSQKNNQGYKIKAEDTIWCKQGALTA HHHHHHHHHHHHHHHCCCCHHHHEEECCCCCCCCCCCCCCCCCEEEECCCEEECCCCHHH KLLRESEDEQMIADILASILLNEPLPVSTERLDSLYDLSSKYSQVLDSALATYGFKKLTQ HHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIITTFAVMRESIEAYSSEAKALLRVVNPNSNNPIRTAFYTIFMAFFDLVIRKGLSPVDP HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCH EGIMNGLRGLQKKLDLSSHYTTTDDRKSNIKQTIGLIQDCFAKKEPSALGHGVELVLDLE HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCEEEEEECH NSLRRSRIETSRYECKQGLLDLSAKRNLNKALLERIVETICGIANLGSETDGYIHIGITD HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC CEKDAHRIEELDNIKSIEINGRYVVGIDREARLQNQTVEQYVRVLTNVIHNSSLTDPLKT CHHHHHHHHHHCCCCEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH QILTKFDTISYKGFSVIRITIPVQTDVSFLGEKVFSRKDSSTVEVHGRELLAISKLFQK HHHHHHHCEEECCEEEEEEEEECCCCHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA