| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is dnaK [H]
Identifier: 17228759
GI number: 17228759
Start: 1499374
End: 1500972
Strand: Direct
Name: dnaK [H]
Synonym: alr1264
Alternate gene names: 17228759
Gene position: 1499374-1500972 (Clockwise)
Preceding gene: 17228758
Following gene: 17228761
Centisome position: 23.38
GC content: 43.28
Gene sequence:
>1599_bases ATGGCGATCGCGATTGACTTTGGTACAAGTAACACCGTAATTGCTCGTTGGAACCCCGTCACCCAACAACCAGAAACCAT CACCTTACCAGGCTTATCCATCCAGCAAAGCCTCAATCCCCCACTAATTCCCAGCTTGGTTTACGTAGAAGATGCCAACC AAAGTAAAATCTTAGTAGGGCAACAAGTACGCGATCGCGGTCTTGACCTCAAAGGTGATACCCGATTCTTTCGCAGCTTC AAACGAGGAATTGGGGCAGATATCCAAGGCTTCTTACCAGAACTAGACGGGCAAATTGTCACCTTTGAACAAGTCGGACA ATGGTTCCTCACCGAAGTTATTCAACAACTAGCACCCCTAGAAGGCGGTTTAGATTCCCTAGTATTAACAGTACCTGTAG ATAGCTTTGAAGCTTATCGTTATTGGTTAGGTCAAGTCTGCCAAGCCCTACCTGTGGAACAAGTGCGGATGTTAGATGAA CCCACAGCCGCCGCCTTGGGTTATGGTTTAGCAGACCAAGAAATTCTCTTAGTAGTTGATTTTGGTGGCGGGACATTAGA TTTATCCCTCGTCCAGTTAAATAAAAGCGCCCAAACAAATACAAAACCTGTAGGATTCTTACTCAAATGGGGTAATAAAT CCCTAGCAGAAGAATCTAAACAAAAAACCAAAACTGCCCGTGTATTGGCGAAAGCCGGGCAGAATTTAGGCGGTACAGAT ATTGATAATTGGTTAGTAGATTACTTTGCCAAAACTCAAGGGCTAGGGATAAGCCCTTTAACAACGCGACTAGCAGAAAG GATAAAAATTCAACTATCAGCCCAAAACCAAGCCAGTGAAGTTTATTTTGATGATGAAAACTTTGAAAGTTACGAATTGG AATTAAATCGGGATACTTTAGAAAGCATCCTCAAAGAACATGGGTTTTTTGAGCAGTTAGATGATGCAATGGCTAATTTA TTACAACAAGCACGCCGCCAAGGAATCGAACTAGCAGATATTAATGCAGTGTTATTAGTTGGTGGTACAGTACAACTACC CGCAGTGCAGACATGGGTAAAGCAATATTTTCAGCCAGAGAAAATCCGTTGTGAAAAACCATTTGAGGCGATCGCTCAAG GTGCATTGCAACTATCTCAAGGTGTAGAAATCAAAGACTTTCTCTACCACAGTTATGGTGTGCGCTATTGGGATCGTCGC AATCAACGCCACAGTTGGCATTCAATTATTAAGGCTGGGCAAGGCTACCCCATGAATCAGCCAGTAGAATTGGTTTTAGG CGCTTCTTTGGAGAATCAATCAAGTATTGAATTAATCTTGGGTGAACTAGGTACAGAGACGGGGGGAACAGAAGTATATT TTGATGGCGATCGCTTAATTACCCGCCGCCTAGATACCGGTGTCACCAGCGTTAAACCCCTCAACGATAAAGAAGGCGCA AGAACTATAGCCCAACTCACACCACCAGGATTTCCGGGGAGCGATCGTATTAAAATCTTGTTTCAAGTTGATGAACAGCG CTTTTTACGCATCACCGTTGAAGATTTATTGACTAATGATACTTTGCTAGAAAATCAACTGGTGGCACAGTTGAGTTAA
Upstream 100 bases:
>100_bases CGATCGCCCACTTGCGCTCATGGTGGCTTATGGGACAATAGTTCTTTGATATAAAAGCACTTTGTGATTTTGCGTTTTTG CGCGAACATAATAAAAGAAT
Downstream 100 bases:
>100_bases ATTAGTTTGGGGTGGAATGGATTTAAGTTTACGGGTTTTATCTATAATTGAGTGCGATCGCCTAAATCTTCAACATGAAA AAGACAGCAGTTTTTCCCCC
Product: DnaK-type molecular chaperone
Products: NA
Alternate protein names: HSP70; Heat shock 70 kDa protein; Heat shock protein 70 [H]
Number of amino acids: Translated: 532; Mature: 531
Protein sequence:
>532_residues MAIAIDFGTSNTVIARWNPVTQQPETITLPGLSIQQSLNPPLIPSLVYVEDANQSKILVGQQVRDRGLDLKGDTRFFRSF KRGIGADIQGFLPELDGQIVTFEQVGQWFLTEVIQQLAPLEGGLDSLVLTVPVDSFEAYRYWLGQVCQALPVEQVRMLDE PTAAALGYGLADQEILLVVDFGGGTLDLSLVQLNKSAQTNTKPVGFLLKWGNKSLAEESKQKTKTARVLAKAGQNLGGTD IDNWLVDYFAKTQGLGISPLTTRLAERIKIQLSAQNQASEVYFDDENFESYELELNRDTLESILKEHGFFEQLDDAMANL LQQARRQGIELADINAVLLVGGTVQLPAVQTWVKQYFQPEKIRCEKPFEAIAQGALQLSQGVEIKDFLYHSYGVRYWDRR NQRHSWHSIIKAGQGYPMNQPVELVLGASLENQSSIELILGELGTETGGTEVYFDGDRLITRRLDTGVTSVKPLNDKEGA RTIAQLTPPGFPGSDRIKILFQVDEQRFLRITVEDLLTNDTLLENQLVAQLS
Sequences:
>Translated_532_residues MAIAIDFGTSNTVIARWNPVTQQPETITLPGLSIQQSLNPPLIPSLVYVEDANQSKILVGQQVRDRGLDLKGDTRFFRSF KRGIGADIQGFLPELDGQIVTFEQVGQWFLTEVIQQLAPLEGGLDSLVLTVPVDSFEAYRYWLGQVCQALPVEQVRMLDE PTAAALGYGLADQEILLVVDFGGGTLDLSLVQLNKSAQTNTKPVGFLLKWGNKSLAEESKQKTKTARVLAKAGQNLGGTD IDNWLVDYFAKTQGLGISPLTTRLAERIKIQLSAQNQASEVYFDDENFESYELELNRDTLESILKEHGFFEQLDDAMANL LQQARRQGIELADINAVLLVGGTVQLPAVQTWVKQYFQPEKIRCEKPFEAIAQGALQLSQGVEIKDFLYHSYGVRYWDRR NQRHSWHSIIKAGQGYPMNQPVELVLGASLENQSSIELILGELGTETGGTEVYFDGDRLITRRLDTGVTSVKPLNDKEGA RTIAQLTPPGFPGSDRIKILFQVDEQRFLRITVEDLLTNDTLLENQLVAQLS >Mature_531_residues AIAIDFGTSNTVIARWNPVTQQPETITLPGLSIQQSLNPPLIPSLVYVEDANQSKILVGQQVRDRGLDLKGDTRFFRSFK RGIGADIQGFLPELDGQIVTFEQVGQWFLTEVIQQLAPLEGGLDSLVLTVPVDSFEAYRYWLGQVCQALPVEQVRMLDEP TAAALGYGLADQEILLVVDFGGGTLDLSLVQLNKSAQTNTKPVGFLLKWGNKSLAEESKQKTKTARVLAKAGQNLGGTDI DNWLVDYFAKTQGLGISPLTTRLAERIKIQLSAQNQASEVYFDDENFESYELELNRDTLESILKEHGFFEQLDDAMANLL QQARRQGIELADINAVLLVGGTVQLPAVQTWVKQYFQPEKIRCEKPFEAIAQGALQLSQGVEIKDFLYHSYGVRYWDRRN QRHSWHSIIKAGQGYPMNQPVELVLGASLENQSSIELILGELGTETGGTEVYFDGDRLITRRLDTGVTSVKPLNDKEGAR TIAQLTPPGFPGSDRIKILFQVDEQRFLRITVEDLLTNDTLLENQLVAQLS
Specific function: Acts as a chaperone [H]
COG id: COG0443
COG function: function code O; Molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 70 family [H]
Homologues:
Organism=Escherichia coli, GI1786196, Length=430, Percent_Identity=27.2093023255814, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI1788875, Length=412, Percent_Identity=26.2135922330097, Blast_Score=86, Evalue=6e-18, Organism=Escherichia coli, GI1786870, Length=389, Percent_Identity=25.4498714652956, Blast_Score=77, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17534771, Length=319, Percent_Identity=26.9592476489028, Blast_Score=83, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17568549, Length=319, Percent_Identity=26.3322884012539, Blast_Score=80, Evalue=3e-15, Organism=Caenorhabditis elegans, GI32564617, Length=429, Percent_Identity=23.3100233100233, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI17737941, Length=303, Percent_Identity=27.7227722772277, Blast_Score=72, Evalue=1e-12,
Paralogues:
None
Copy number: 1300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 320 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 500 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stati
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012725 - InterPro: IPR018181 - InterPro: IPR001023 - InterPro: IPR013126 [H]
Pfam domain/function: PF00012 HSP70 [H]
EC number: NA
Molecular weight: Translated: 59213; Mature: 59082
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: PS00329 HSP70_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIAIDFGTSNTVIARWNPVTQQPETITLPGLSIQQSLNPPLIPSLVYVEDANQSKILVG CEEEEEECCCCEEEEECCCCCCCCCEEEECCCCHHHCCCCCCCCEEEEEECCCCCEEEEC QQVRDRGLDLKGDTRFFRSFKRGIGADIQGFLPELDGQIVTFEQVGQWFLTEVIQQLAPL HHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCC EGGLDSLVLTVPVDSFEAYRYWLGQVCQALPVEQVRMLDEPTAAALGYGLADQEILLVVD CCCCCCEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHCCCCCCCEEEEEEE FGGGTLDLSLVQLNKSAQTNTKPVGFLLKWGNKSLAEESKQKTKTARVLAKAGQNLGGTD CCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC IDNWLVDYFAKTQGLGISPLTTRLAERIKIQLSAQNQASEVYFDDENFESYELELNRDTL HHHHHHHHHHHHCCCCCCHHHHHHHHHEEEEEECCCCCCEEEECCCCCCEEEEEECHHHH ESILKEHGFFEQLDDAMANLLQQARRQGIELADINAVLLVGGTVQLPAVQTWVKQYFQPE HHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEECCEEEEECCCEECHHHHHHHHHHCCCC KIRCEKPFEAIAQGALQLSQGVEIKDFLYHSYGVRYWDRRNQRHSWHSIIKAGQGYPMNQ CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHCCCCCHHHHHHHHCCCCCCCCC PVELVLGASLENQSSIELILGELGTETGGTEVYFDGDRLITRRLDTGVTSVKPLNDKEGA CHHEEEECCCCCCCCHHHHEEHHCCCCCCEEEEECCCHHEEHHHHCCCCCCCCCCCCHHH RTIAQLTPPGFPGSDRIKILFQVDEQRFLRITVEDLLTNDTLLENQLVAQLS HHHHHCCCCCCCCCCCEEEEEEECCCEEEEEEHHHHHCCCHHHHHHHHHHCC >Mature Secondary Structure AIAIDFGTSNTVIARWNPVTQQPETITLPGLSIQQSLNPPLIPSLVYVEDANQSKILVG EEEEEECCCCEEEEECCCCCCCCCEEEECCCCHHHCCCCCCCCEEEEEECCCCCEEEEC QQVRDRGLDLKGDTRFFRSFKRGIGADIQGFLPELDGQIVTFEQVGQWFLTEVIQQLAPL HHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCC EGGLDSLVLTVPVDSFEAYRYWLGQVCQALPVEQVRMLDEPTAAALGYGLADQEILLVVD CCCCCCEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHCCCCCCCEEEEEEE FGGGTLDLSLVQLNKSAQTNTKPVGFLLKWGNKSLAEESKQKTKTARVLAKAGQNLGGTD CCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC IDNWLVDYFAKTQGLGISPLTTRLAERIKIQLSAQNQASEVYFDDENFESYELELNRDTL HHHHHHHHHHHHCCCCCCHHHHHHHHHEEEEEECCCCCCEEEECCCCCCEEEEEECHHHH ESILKEHGFFEQLDDAMANLLQQARRQGIELADINAVLLVGGTVQLPAVQTWVKQYFQPE HHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEECCEEEEECCCEECHHHHHHHHHHCCCC KIRCEKPFEAIAQGALQLSQGVEIKDFLYHSYGVRYWDRRNQRHSWHSIIKAGQGYPMNQ CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHCCCCCHHHHHHHHCCCCCCCCC PVELVLGASLENQSSIELILGELGTETGGTEVYFDGDRLITRRLDTGVTSVKPLNDKEGA CHHEEEECCCCCCCCHHHHEEHHCCCCCCEEEEECCCHHEEHHHHCCCCCCCCCCCCHHH RTIAQLTPPGFPGSDRIKILFQVDEQRFLRITVEDLLTNDTLLENQLVAQLS HHHHHCCCCCCCCCCCEEEEEEECCCEEEEEEHHHHHCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA