| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is aroK [H]
Identifier: 17228739
GI number: 17228739
Start: 1478704
End: 1479249
Strand: Direct
Name: aroK [H]
Synonym: alr1244
Alternate gene names: 17228739
Gene position: 1478704-1479249 (Clockwise)
Preceding gene: 17228737
Following gene: 17228740
Centisome position: 23.06
GC content: 43.59
Gene sequence:
>546_bases GTGAGTAGTTTATTGCAGGGAGTTAACCTATACTTAATCGGCATGATGGGCGCTGGTAAGACTACAGTAGGACATTTACT CGCCAAAGAATTGGGTTATGGCTTTTTAGATACTGATAATGTGATTGCCCAAGCTACTAAAAAATCTATCAATGAGATAT TTGCCGAAGCAGGGGAAGCCGGATTTCGCCAGATAGAAAGCGATGTGTTAGCCCAGGTTTGTTCCTATACTAAGTTGACT GTAGCGACAGGTGGCGGCATTGTGTTGCGGCGAGAAAATTGGAGTTACCTACACCACGGTTTAATTTTGTGGCTAGATGT GCCAGTAGATATACTCTATGCACGTTTAGCGGCAGATACAACAAGACCACTTTTACAGGATGATGACCCAAAAGGCAAAT TGCGATCGCTCCTGGAACAACGCACACCGCTTTATTCGCAAGCAGATTTACGCATCTGTGTCAATGCAGAAGAAACACCA GAACAAATTGCCAATAAAGTTATGCAGGCAATTCCCAGCGTCTTGAAACAAACTGCCTCTAATTAG
Upstream 100 bases:
>100_bases GGCAAGGCTGATTGTATTATGGTTTCTTGAGCATCACCCATCCTACTGGGGTTATTTTCAATCAACACAGCAGATTCTGA TAACGGAGAATTAAACAAGA
Downstream 100 bases:
>100_bases TTAGGACTTACGCACCCAGATTTTCTGTTGAGGCTGGGTGTAAGGGTGTAGGGGTGTAAGGGTTTCAAACATTTATACCC CTACACCCCTATACCCCTAT
Product: shikimate kinase
Products: NA
Alternate protein names: SK [H]
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MSSLLQGVNLYLIGMMGAGKTTVGHLLAKELGYGFLDTDNVIAQATKKSINEIFAEAGEAGFRQIESDVLAQVCSYTKLT VATGGGIVLRRENWSYLHHGLILWLDVPVDILYARLAADTTRPLLQDDDPKGKLRSLLEQRTPLYSQADLRICVNAEETP EQIANKVMQAIPSVLKQTASN
Sequences:
>Translated_181_residues MSSLLQGVNLYLIGMMGAGKTTVGHLLAKELGYGFLDTDNVIAQATKKSINEIFAEAGEAGFRQIESDVLAQVCSYTKLT VATGGGIVLRRENWSYLHHGLILWLDVPVDILYARLAADTTRPLLQDDDPKGKLRSLLEQRTPLYSQADLRICVNAEETP EQIANKVMQAIPSVLKQTASN >Mature_180_residues SSLLQGVNLYLIGMMGAGKTTVGHLLAKELGYGFLDTDNVIAQATKKSINEIFAEAGEAGFRQIESDVLAQVCSYTKLTV ATGGGIVLRRENWSYLHHGLILWLDVPVDILYARLAADTTRPLLQDDDPKGKLRSLLEQRTPLYSQADLRICVNAEETPE QIANKVMQAIPSVLKQTASN
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate [H]
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family [H]
Homologues:
Organism=Homo sapiens, GI153792148, Length=171, Percent_Identity=29.2397660818713, Blast_Score=72, Evalue=4e-13, Organism=Escherichia coli, GI87082255, Length=168, Percent_Identity=33.9285714285714, Blast_Score=100, Evalue=4e-23, Organism=Escherichia coli, GI1786587, Length=166, Percent_Identity=33.7349397590361, Blast_Score=87, Evalue=6e-19,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.71 [H]
Molecular weight: Translated: 19816; Mature: 19685
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLLQGVNLYLIGMMGAGKTTVGHLLAKELGYGFLDTDNVIAQATKKSINEIFAEAGEA CCHHHHHCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GFRQIESDVLAQVCSYTKLTVATGGGIVLRRENWSYLHHGLILWLDVPVDILYARLAADT HHHHHHHHHHHHHHCCCEEEEEECCEEEEEECCCHHHHCCCCEEEECCHHHHHHHHHHHH TRPLLQDDDPKGKLRSLLEQRTPLYSQADLRICVNAEETPEQIANKVMQAIPSVLKQTAS CCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC N C >Mature Secondary Structure SSLLQGVNLYLIGMMGAGKTTVGHLLAKELGYGFLDTDNVIAQATKKSINEIFAEAGEA CHHHHHCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GFRQIESDVLAQVCSYTKLTVATGGGIVLRRENWSYLHHGLILWLDVPVDILYARLAADT HHHHHHHHHHHHHHCCCEEEEEECCEEEEEECCCHHHHCCCCEEEECCHHHHHHHHHHHH TRPLLQDDDPKGKLRSLLEQRTPLYSQADLRICVNAEETPEQIANKVMQAIPSVLKQTAS CCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC N C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA