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The map label for this gene is 17228727

Identifier: 17228727

GI number: 17228727

Start: 1459523

End: 1461928

Strand: Direct

Name: 17228727

Synonym: alr1232

Alternate gene names: NA

Gene position: 1459523-1461928 (Clockwise)

Preceding gene: 17228726

Following gene: 17228728

Centisome position: 22.76

GC content: 33.67

Gene sequence:

>2406_bases
ATGTTTGCGATCGCGTTGGTGTTTTTGTATAAGTTAGTATATAAGTTGTATAAATTGTATAATAACGGACAAATTGTTGT
CATGGCAAAGCGATCGCTCCAAGCCTCTGCGGAAGGTATTAGAAAAGCAAAGCAGGCTTTTAAGCGCAAAGGATGGACAC
AAGAATATCTGGCGGCGGAAGTTGGTTTAGAAACACGCCAGTCAATATGGAAATTTTTTACTGGTAAACCTATAGATCGT
CACGTCTTTAATGATATTTGCTTTGCGCTAGAACTGGAGACAGCAGAAATTTTCCAACAATCCGTTGAAAATTCTTTATA
TTTAGAAGGTGACGAATATAGCCTAATAGATATTGATCTTCTAGTACAAAAATTACGCTCTATTCATCACGACAAAATTC
AGGCTCAATGTAGCACATTACATCTTTTAGATATTGCTAGACCAATTTTACTTAATGACATTTATATTGATGTCAACATC
AGCGAGGAAATTTCTAGTAAAAGATGGTTAGATATTCAAGATTTACAAAAGCTAGGTTCCCATAATATTAATTCTCCCAT
TTTTACACAACGAGATCAAAAATCAATCGGGGGTTTAGAAGCTCTGAAAAAATATTCCAAAATGATATTATTGGGGAAAC
TAGGCTCAGGTAAAACTACATTTTTACAATCAGTTGCTCTGAGTTGTACTCAAGGAATATTTCAGCCAAATTACCTACCT
ATTTTTGTCAATCTCAAAAACTTTGCGGAAGATGCTAAAGATTCTCGGCAACTTAGCTTATTTAAATATATACTCGACCA
TGTGATGAACTTTGGCATTACTGAAGGAGAATTGAGGACTGTATTATCTCATGGTAGAGCCTTAATTTTGTTAGATGGGT
TAAATGAGATTATAGGACAGAACCATGAAAAAAACATCAATAAAATTCACGGTTTTATCCAAAAATTTTATAAAAATCAA
ATAGTTATTACTTGCCGTACAGGCACAAACTATTCTAATTTTCATGGCTTTACAGAAGTAGAAATCACTGATTTTGATAA
AATAAAAATCACCGAATTTGCTAATAAGTGGTTCTTGAGAGTAGCTAACAATTCGCAAGAAAAATCTAAATTTTTAGCAC
ACAAATTTGTGCAAAGGCTCGAACTAGAAAAAAATCATCGTCTTCTTGAGTTAGCTAACAGACCAGCCTTATTGATTCTT
TGCTGTTTGGCATTCCAGTCTGCGGCAGATTTCCCTTTTCATCATTTTGAAATTTATAAACAAGCATTGGATTTGCTTTT
AGTCCGCTACGATGATGTAAGAGTAATTCAATACAGTCGAACTTTTACTAATTTATCTCTGTTGCACAAAATCAAGCTAC
TTAGTCACATAGCCGCAATTAGCTTTCATCAAGGGGATTATTTTCTCACTGAAACAAAGCTCCAGCAAGTAATAACTGAA
TATCTACTCCATCAAAGCAATACCATAACTGATACAGATGCTTTGGAACTAGAGAGTACCGCAATCATCAAAACAATTGA
ATTACAGCATGGTTTATTAGTTGAAAGAGCGAAAGGCGTTTACTCTTTCTCTCATCTCATATTTCAAGAGTATTTTATAG
CTAGAGAAATCGTAGCTAATGCAAATAATCAAATGCTGCAAGAATTAGTTAGCCATTTATCTGATCAACGCTGGCATGAA
GTATTTTTGCTAGTTGTCTGGATGCTACAACCAGTAGATAATTTATTAAAATTAATCAAGGAAAAGATTGATAATATAGC
TATCGGAAATCGCAGACTATATCATTTTATACAATGGGTAGAACACAAGTCTGCTCAAGTAAGTTATATCTACCATCCTG
CTAGTGTACGTGCTTTTTACTTTAGTATAGCTTTACCTCCAGAACATCCCTTGGCTTGTAACCAAGATTTAGCAATATCC
TTAGAGCATCAGTTTACTGGTAGTTTGTCTATAGACTTAGCATTAGATTTGGCTTTAACTAATGCACTAGCGATGAGTAT
GACAATGACGGCTGATATATTTTTTGCTAGGTTATCTACTTTAAATTTAGCTCTAGACTTGAAGCACTTATTAGTCAATC
AGGTATCTTTACATAACTCACTGCAAAATATTAAAAACCAGTTACCATCTTCTACTCAAGGAAGAGAATACTTAAGAGAT
TGGTGGCTATCAAATGGACAAGCATGGACTGAAGAATTACGCGATTTGATGATTAATGAGCGTAAGATTGGAATTGATTG
GCAGTTCGTACAACAAGATTTACAAGATTTACAAAAGTATTGGGATGCCAACAAATTACTAATAGATTGTCTAAAATTTG
CTAGAGATATTTCACCTACTTTACGTTATGAGTTAGAAACAAGTTTATTTTTAGCTAAACAATATCAATTAAATGTAATT
ATGTAA

Upstream 100 bases:

>100_bases
AGCTTAAGCATTGCTCAGATTGCCATTGGCTCTTTGGGCAATGCCGTAAGCTAGTTGGGTATGTAGATTTGGCTGACTCA
AGTTCTATTATGTACAACGG

Downstream 100 bases:

>100_bases
ATCAACTATGGGTAAAAAAATTTTGGATGCGGTCTAAACTACTAGTTAAGTGAGTTTCATATTTAGATATGGTAATTGAG
CATACCTTAATTATTCACAG

Product: hypothetical protein

Products: NA

Alternate protein names: Signal Transduction Protein With Nacht Domain; Signal Transduction Protein; Signal Transduction Protein With Nacht Domain Protein; XRE Family Transcriptional Regulator; NTPase-Like Protein

Number of amino acids: Translated: 801; Mature: 801

Protein sequence:

>801_residues
MFAIALVFLYKLVYKLYKLYNNGQIVVMAKRSLQASAEGIRKAKQAFKRKGWTQEYLAAEVGLETRQSIWKFFTGKPIDR
HVFNDICFALELETAEIFQQSVENSLYLEGDEYSLIDIDLLVQKLRSIHHDKIQAQCSTLHLLDIARPILLNDIYIDVNI
SEEISSKRWLDIQDLQKLGSHNINSPIFTQRDQKSIGGLEALKKYSKMILLGKLGSGKTTFLQSVALSCTQGIFQPNYLP
IFVNLKNFAEDAKDSRQLSLFKYILDHVMNFGITEGELRTVLSHGRALILLDGLNEIIGQNHEKNINKIHGFIQKFYKNQ
IVITCRTGTNYSNFHGFTEVEITDFDKIKITEFANKWFLRVANNSQEKSKFLAHKFVQRLELEKNHRLLELANRPALLIL
CCLAFQSAADFPFHHFEIYKQALDLLLVRYDDVRVIQYSRTFTNLSLLHKIKLLSHIAAISFHQGDYFLTETKLQQVITE
YLLHQSNTITDTDALELESTAIIKTIELQHGLLVERAKGVYSFSHLIFQEYFIAREIVANANNQMLQELVSHLSDQRWHE
VFLLVVWMLQPVDNLLKLIKEKIDNIAIGNRRLYHFIQWVEHKSAQVSYIYHPASVRAFYFSIALPPEHPLACNQDLAIS
LEHQFTGSLSIDLALDLALTNALAMSMTMTADIFFARLSTLNLALDLKHLLVNQVSLHNSLQNIKNQLPSSTQGREYLRD
WWLSNGQAWTEELRDLMINERKIGIDWQFVQQDLQDLQKYWDANKLLIDCLKFARDISPTLRYELETSLFLAKQYQLNVI
M

Sequences:

>Translated_801_residues
MFAIALVFLYKLVYKLYKLYNNGQIVVMAKRSLQASAEGIRKAKQAFKRKGWTQEYLAAEVGLETRQSIWKFFTGKPIDR
HVFNDICFALELETAEIFQQSVENSLYLEGDEYSLIDIDLLVQKLRSIHHDKIQAQCSTLHLLDIARPILLNDIYIDVNI
SEEISSKRWLDIQDLQKLGSHNINSPIFTQRDQKSIGGLEALKKYSKMILLGKLGSGKTTFLQSVALSCTQGIFQPNYLP
IFVNLKNFAEDAKDSRQLSLFKYILDHVMNFGITEGELRTVLSHGRALILLDGLNEIIGQNHEKNINKIHGFIQKFYKNQ
IVITCRTGTNYSNFHGFTEVEITDFDKIKITEFANKWFLRVANNSQEKSKFLAHKFVQRLELEKNHRLLELANRPALLIL
CCLAFQSAADFPFHHFEIYKQALDLLLVRYDDVRVIQYSRTFTNLSLLHKIKLLSHIAAISFHQGDYFLTETKLQQVITE
YLLHQSNTITDTDALELESTAIIKTIELQHGLLVERAKGVYSFSHLIFQEYFIAREIVANANNQMLQELVSHLSDQRWHE
VFLLVVWMLQPVDNLLKLIKEKIDNIAIGNRRLYHFIQWVEHKSAQVSYIYHPASVRAFYFSIALPPEHPLACNQDLAIS
LEHQFTGSLSIDLALDLALTNALAMSMTMTADIFFARLSTLNLALDLKHLLVNQVSLHNSLQNIKNQLPSSTQGREYLRD
WWLSNGQAWTEELRDLMINERKIGIDWQFVQQDLQDLQKYWDANKLLIDCLKFARDISPTLRYELETSLFLAKQYQLNVI
M
>Mature_801_residues
MFAIALVFLYKLVYKLYKLYNNGQIVVMAKRSLQASAEGIRKAKQAFKRKGWTQEYLAAEVGLETRQSIWKFFTGKPIDR
HVFNDICFALELETAEIFQQSVENSLYLEGDEYSLIDIDLLVQKLRSIHHDKIQAQCSTLHLLDIARPILLNDIYIDVNI
SEEISSKRWLDIQDLQKLGSHNINSPIFTQRDQKSIGGLEALKKYSKMILLGKLGSGKTTFLQSVALSCTQGIFQPNYLP
IFVNLKNFAEDAKDSRQLSLFKYILDHVMNFGITEGELRTVLSHGRALILLDGLNEIIGQNHEKNINKIHGFIQKFYKNQ
IVITCRTGTNYSNFHGFTEVEITDFDKIKITEFANKWFLRVANNSQEKSKFLAHKFVQRLELEKNHRLLELANRPALLIL
CCLAFQSAADFPFHHFEIYKQALDLLLVRYDDVRVIQYSRTFTNLSLLHKIKLLSHIAAISFHQGDYFLTETKLQQVITE
YLLHQSNTITDTDALELESTAIIKTIELQHGLLVERAKGVYSFSHLIFQEYFIAREIVANANNQMLQELVSHLSDQRWHE
VFLLVVWMLQPVDNLLKLIKEKIDNIAIGNRRLYHFIQWVEHKSAQVSYIYHPASVRAFYFSIALPPEHPLACNQDLAIS
LEHQFTGSLSIDLALDLALTNALAMSMTMTADIFFARLSTLNLALDLKHLLVNQVSLHNSLQNIKNQLPSSTQGREYLRD
WWLSNGQAWTEELRDLMINERKIGIDWQFVQQDLQDLQKYWDANKLLIDCLKFARDISPTLRYELETSLFLAKQYQLNVI
M

Specific function: Unknown

COG id: COG5635

COG function: function code T; Predicted NTPase (NACHT family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 92714; Mature: 92714

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS50837 NACHT ; PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAIALVFLYKLVYKLYKLYNNGQIVVMAKRSLQASAEGIRKAKQAFKRKGWTQEYLAAE
CHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
VGLETRQSIWKFFTGKPIDRHVFNDICFALELETAEIFQQSVENSLYLEGDEYSLIDIDL
HCHHHHHHHHHHHCCCCCHHHHHHHHHHHEEECHHHHHHHHHCCCEEEECCCEEEEEHHH
LVQKLRSIHHDKIQAQCSTLHLLDIARPILLNDIYIDVNISEEISSKRWLDIQDLQKLGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEHHHHCCCCCCCHHHHHHHCC
HNINSPIFTQRDQKSIGGLEALKKYSKMILLGKLGSGKTTFLQSVALSCTQGIFQPNYLP
CCCCCCCCCCCCHHHCCHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEE
IFVNLKNFAEDAKDSRQLSLFKYILDHVMNFGITEGELRTVLSHGRALILLDGLNEIIGQ
EEEEHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCHHHHHCC
NHEKNINKIHGFIQKFYKNQIVITCRTGTNYSNFHGFTEVEITDFDKIKITEFANKWFLR
CCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEECCCCEEHHHHHCCEEEE
VANNSQEKSKFLAHKFVQRLELEKNHRLLELANRPALLILCCLAFQSAADFPFHHFEIYK
ECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHH
QALDLLLVRYDDVRVIQYSRTFTNLSLLHKIKLLSHIAAISFHQGDYFLTETKLQQVITE
HHHHHHHHEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHEEECCCEEEEHHHHHHHHHH
YLLHQSNTITDTDALELESTAIIKTIELQHGLLVERAKGVYSFSHLIFQEYFIAREIVAN
HHHHCCCCCCCCCCHHCCCHHHEEEEEHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHC
ANNQMLQELVSHLSDQRWHEVFLLVVWMLQPVDNLLKLIKEKIDNIAIGNRRLYHFIQWV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
EHKSAQVSYIYHPASVRAFYFSIALPPEHPLACNQDLAISLEHQFTGSLSIDLALDLALT
HCCCCEEEEEEECHHEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEHHHHHHHH
NALAMSMTMTADIFFARLSTLNLALDLKHLLVNQVSLHNSLQNIKNQLPSSTQGREYLRD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
WWLSNGQAWTEELRDLMINERKIGIDWQFVQQDLQDLQKYWDANKLLIDCLKFARDISPT
HHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCH
LRYELETSLFLAKQYQLNVIM
HHHHHHHHHHEEEEEEEEEEC
>Mature Secondary Structure
MFAIALVFLYKLVYKLYKLYNNGQIVVMAKRSLQASAEGIRKAKQAFKRKGWTQEYLAAE
CHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
VGLETRQSIWKFFTGKPIDRHVFNDICFALELETAEIFQQSVENSLYLEGDEYSLIDIDL
HCHHHHHHHHHHHCCCCCHHHHHHHHHHHEEECHHHHHHHHHCCCEEEECCCEEEEEHHH
LVQKLRSIHHDKIQAQCSTLHLLDIARPILLNDIYIDVNISEEISSKRWLDIQDLQKLGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEHHHHCCCCCCCHHHHHHHCC
HNINSPIFTQRDQKSIGGLEALKKYSKMILLGKLGSGKTTFLQSVALSCTQGIFQPNYLP
CCCCCCCCCCCCHHHCCHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEE
IFVNLKNFAEDAKDSRQLSLFKYILDHVMNFGITEGELRTVLSHGRALILLDGLNEIIGQ
EEEEHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCHHHHHCC
NHEKNINKIHGFIQKFYKNQIVITCRTGTNYSNFHGFTEVEITDFDKIKITEFANKWFLR
CCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEECCCCEEHHHHHCCEEEE
VANNSQEKSKFLAHKFVQRLELEKNHRLLELANRPALLILCCLAFQSAADFPFHHFEIYK
ECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHH
QALDLLLVRYDDVRVIQYSRTFTNLSLLHKIKLLSHIAAISFHQGDYFLTETKLQQVITE
HHHHHHHHEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHEEECCCEEEEHHHHHHHHHH
YLLHQSNTITDTDALELESTAIIKTIELQHGLLVERAKGVYSFSHLIFQEYFIAREIVAN
HHHHCCCCCCCCCCHHCCCHHHEEEEEHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHC
ANNQMLQELVSHLSDQRWHEVFLLVVWMLQPVDNLLKLIKEKIDNIAIGNRRLYHFIQWV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
EHKSAQVSYIYHPASVRAFYFSIALPPEHPLACNQDLAISLEHQFTGSLSIDLALDLALT
HCCCCEEEEEEECHHEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEHHHHHHHH
NALAMSMTMTADIFFARLSTLNLALDLKHLLVNQVSLHNSLQNIKNQLPSSTQGREYLRD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
WWLSNGQAWTEELRDLMINERKIGIDWQFVQQDLQDLQKYWDANKLLIDCLKFARDISPT
HHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCH
LRYELETSLFLAKQYQLNVIM
HHHHHHHHHHEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA