| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17228651
Identifier: 17228651
GI number: 17228651
Start: 1361951
End: 1362163
Strand: Direct
Name: 17228651
Synonym: asr1156
Alternate gene names: NA
Gene position: 1361951-1362163 (Clockwise)
Preceding gene: 17228650
Following gene: 17228652
Centisome position: 21.23
GC content: 47.89
Gene sequence:
>213_bases ATTATTCTGGATCTTTCGCAAATTGACTTTGTTGACAGTTCCGGCTTGGGCGCTCTGGTGCAGCTAGCCAAGCAAGCTCA AACGGCCGAAGGAACCTTGCAAATTGTCACCAATGCACGCGTTACTCAAACTGTCAAGCTCGTTCGCTTAGAGAAGTTTC TCTCACTGCAATCCACAGTTGACGCAGCTGTAGAAAACATCAAGGGTGCTTGA
Upstream 100 bases:
>100_bases TAACTATCAGCTATTCCGCCTCACAGGTCTGTTAGATGCCTTTTCTGAGCCGACGTTTCGCAAGGTACTTGGCGGCAAAA TTGATGAAGGCCCAAAGCAT
Downstream 100 bases:
>100_bases CCTCATAGAGAGATTAAGCTATCCGATATTTTTCGGCATAGCTTAATTTATAGAAAGGTTGGCGAAAAACCTCTCTCTGT CTGGGAGAGGTAAAAAAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Anti-Anti-Sigma Regulatory Factor; STAS Domain-Containing Protein; Anti-Anti-Sigma Regulatory Factor SpoIIAA; Anti-Sigma-Factor Antagonist Domain-Containing Protein; Anti-Anti-Sigma Regulatory Factor RsbV; Anti-Anti-Sigma Factor; Anti-Anti-Sigma Factor Family Protein; Anti-Sigma F Factor Antagonist; Anti-Anti-Sigma Regulatory Factor Spoiiaa; Anti-Sigma F Factor
Number of amino acids: Translated: 70; Mature: 70
Protein sequence:
>70_residues MILDLSQIDFVDSSGLGALVQLAKQAQTAEGTLQIVTNARVTQTVKLVRLEKFLSLQSTVDAAVENIKGA
Sequences:
>Translated_70_residues MILDLSQIDFVDSSGLGALVQLAKQAQTAEGTLQIVTNARVTQTVKLVRLEKFLSLQSTVDAAVENIKGA >Mature_70_residues MILDLSQIDFVDSSGLGALVQLAKQAQTAEGTLQIVTNARVTQTVKLVRLEKFLSLQSTVDAAVENIKGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7458; Mature: 7458
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILDLSQIDFVDSSGLGALVQLAKQAQTAEGTLQIVTNARVTQTVKLVRLEKFLSLQSTV CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH DAAVENIKGA HHHHHHCCCC >Mature Secondary Structure MILDLSQIDFVDSSGLGALVQLAKQAQTAEGTLQIVTNARVTQTVKLVRLEKFLSLQSTV CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH DAAVENIKGA HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA