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The map label for this gene is yigC [C]

Identifier: 17228603

GI number: 17228603

Start: 1296652

End: 1298160

Strand: Direct

Name: yigC [C]

Synonym: alr1108

Alternate gene names: 17228603

Gene position: 1296652-1298160 (Clockwise)

Preceding gene: 17228602

Following gene: 17228604

Centisome position: 20.22

GC content: 44.07

Gene sequence:

>1509_bases
ATGGCCAGAGATTTACGAGGATTCATTAAAATTTTAGAAGAAAGAGGACAATTACAGCGAATTTCCGCTTTAGTTGACCC
AGATTTAGAAATTGCAGAAATTTCTAATAGAATGCTGCAAAAAGGTGGGCCGGGCTTATTATTTGAAAATGTCAAAGGCG
CATCTTTCCCCGTTGCTGTCAATTTAATGGGAACGGTGGAGAGGATATGCTGGGCGATGAATATGCAGCATCCCCAAGAA
TTAGAGACTCTGGGTAAAAAGCTGAGTATGCTGCAACAACCAAAACCACCCAAGAAAATTTCTCAGGCGATAGATTTTGG
TAAAGTGCTGTTTGATGTGTTGAAAGCGAAACCGGGACGGGATTTTTTTCCGGCTTGTCAGCAAGTGGTAGTTCAAGGTG
ATGATGTAGATTTAAATACGTTACCTTTAATACGTCCTTATCCTAGTGATGCTGGCAAGATTATTACCTTAGGACTAGTG
ATTACTAAAGATTGTGAGACAGGTACGCCAAATGTGGGGGTGTATCGCTTACAACTGCAATCCAAGAATACGATGACCGT
ACACTGGTTATCCGTGCGGGGTGGGGCGAGACATTTACGCAAAGCTGCTGAACGTGGTAAAAAATTAGAGATTGCGATCG
CCCTTGGTGTAGATCCCTTAATTATCATGGCAGCCGCCACACCCATTCCTGTAGATTTATCAGAGTGGCTATTTGCTGGA
TTGTACGGCGGTTCTGGTGTGCAGTTAGCCAAATGTAAAACTGTAGATTTAGAAGTTCCCGCAGATTCCGAGTTTGTCTT
AGAAGGAACCATTACACCAGGGGAAATATTACCAGACGGCCCCTTCGGCGACCACATGGGCTATTATGGCGGCGTGGAAG
ATTCTCCCTTGATTCGCTTCCAGTGCATGACCCACCGCAAAGACCCGATTTATTTGACTACATTTAGCGGTCGTCCACCC
AAAGAAGAAGCGATGATGGCGATCGCACTTAATCGCATTTATACCCCAATTCTACGGCAACAAGTCTCAGAAATTGTTGA
TTTCTTCCTGCCAATGGAAGCATTGAGTTACAAAGCTGCGATTATTTCCATTGATAAAGCATACCCTGGACAAGCAAGAA
GGGCAGCCTTAGCTTTTTGGAGTGCTTTACCCCAATTCACATACACCAAATTCGTCATTGTCGTCGATAAAGACATTAAC
ATTCGTGACCCGCGTCAAGTAGTATGGGCGATTAGTTCCAAAGTTGACCCCACACGGGACGTATTTATTCTCCCGAATAC
ACCATTTGACACCTTAGATTTTGCCAGTGAAAAAATTGGTTTAGGTGGACGTATGGGAATTGATGCAACTACTAAAATTC
CCCCAGAAACAGACCACGAATGGGGTGCGCCTTTAGAATCTGATGCAGATGTAGCAGCGATGGTTGAACGACGATGGGCT
GAGTATGGTTTAGCAGACTTGCAATTAGGAGAAGTTGACCCCAACTTGTTTGGTTACGATATGAAATAG

Upstream 100 bases:

>100_bases
AACGTAAACTAATCCCCAGTCCCCATTTTCCATACAACAGGGCAGCAATGGCTAATAATATAAGAAGGCGCTTCACACTT
CTTAATTATTTAGTTTTACT

Downstream 100 bases:

>100_bases
AACGCCAATTACGCATTAACGTGACGTGAGTTAACTTGAGTTCGATGACCTCTCTCCAAACCCCTCTCTCTTGAAAAGTT
CTGATCGGAGGAAACCTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 502; Mature: 501

Protein sequence:

>502_residues
MARDLRGFIKILEERGQLQRISALVDPDLEIAEISNRMLQKGGPGLLFENVKGASFPVAVNLMGTVERICWAMNMQHPQE
LETLGKKLSMLQQPKPPKKISQAIDFGKVLFDVLKAKPGRDFFPACQQVVVQGDDVDLNTLPLIRPYPSDAGKIITLGLV
ITKDCETGTPNVGVYRLQLQSKNTMTVHWLSVRGGARHLRKAAERGKKLEIAIALGVDPLIIMAAATPIPVDLSEWLFAG
LYGGSGVQLAKCKTVDLEVPADSEFVLEGTITPGEILPDGPFGDHMGYYGGVEDSPLIRFQCMTHRKDPIYLTTFSGRPP
KEEAMMAIALNRIYTPILRQQVSEIVDFFLPMEALSYKAAIISIDKAYPGQARRAALAFWSALPQFTYTKFVIVVDKDIN
IRDPRQVVWAISSKVDPTRDVFILPNTPFDTLDFASEKIGLGGRMGIDATTKIPPETDHEWGAPLESDADVAAMVERRWA
EYGLADLQLGEVDPNLFGYDMK

Sequences:

>Translated_502_residues
MARDLRGFIKILEERGQLQRISALVDPDLEIAEISNRMLQKGGPGLLFENVKGASFPVAVNLMGTVERICWAMNMQHPQE
LETLGKKLSMLQQPKPPKKISQAIDFGKVLFDVLKAKPGRDFFPACQQVVVQGDDVDLNTLPLIRPYPSDAGKIITLGLV
ITKDCETGTPNVGVYRLQLQSKNTMTVHWLSVRGGARHLRKAAERGKKLEIAIALGVDPLIIMAAATPIPVDLSEWLFAG
LYGGSGVQLAKCKTVDLEVPADSEFVLEGTITPGEILPDGPFGDHMGYYGGVEDSPLIRFQCMTHRKDPIYLTTFSGRPP
KEEAMMAIALNRIYTPILRQQVSEIVDFFLPMEALSYKAAIISIDKAYPGQARRAALAFWSALPQFTYTKFVIVVDKDIN
IRDPRQVVWAISSKVDPTRDVFILPNTPFDTLDFASEKIGLGGRMGIDATTKIPPETDHEWGAPLESDADVAAMVERRWA
EYGLADLQLGEVDPNLFGYDMK
>Mature_501_residues
ARDLRGFIKILEERGQLQRISALVDPDLEIAEISNRMLQKGGPGLLFENVKGASFPVAVNLMGTVERICWAMNMQHPQEL
ETLGKKLSMLQQPKPPKKISQAIDFGKVLFDVLKAKPGRDFFPACQQVVVQGDDVDLNTLPLIRPYPSDAGKIITLGLVI
TKDCETGTPNVGVYRLQLQSKNTMTVHWLSVRGGARHLRKAAERGKKLEIAIALGVDPLIIMAAATPIPVDLSEWLFAGL
YGGSGVQLAKCKTVDLEVPADSEFVLEGTITPGEILPDGPFGDHMGYYGGVEDSPLIRFQCMTHRKDPIYLTTFSGRPPK
EEAMMAIALNRIYTPILRQQVSEIVDFFLPMEALSYKAAIISIDKAYPGQARRAALAFWSALPQFTYTKFVIVVDKDINI
RDPRQVVWAISSKVDPTRDVFILPNTPFDTLDFASEKIGLGGRMGIDATTKIPPETDHEWGAPLESDADVAAMVERRWAE
YGLADLQLGEVDPNLFGYDMK

Specific function: Unknown

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=484, Percent_Identity=46.900826446281, Blast_Score=460, Evalue=1e-130,
Organism=Saccharomyces cerevisiae, GI6320748, Length=445, Percent_Identity=26.0674157303371, Blast_Score=113, Evalue=7e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: 4.1.1.-

Molecular weight: Translated: 55497; Mature: 55366

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARDLRGFIKILEERGQLQRISALVDPDLEIAEISNRMLQKGGPGLLFENVKGASFPVAV
CCCHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCEEE
NLMGTVERICWAMNMQHPQELETLGKKLSMLQQPKPPKKISQAIDFGKVLFDVLKAKPGR
EHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC
DFFPACQQVVVQGDDVDLNTLPLIRPYPSDAGKIITLGLVITKDCETGTPNVGVYRLQLQ
CHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEE
SKNTMTVHWLSVRGGARHLRKAAERGKKLEIAIALGVDPLIIMAAATPIPVDLSEWLFAG
CCCEEEEEEEEECCCHHHHHHHHHCCCEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHH
LYGGSGVQLAKCKTVDLEVPADSEFVLEGTITPGEILPDGPFGDHMGYYGGVEDSPLIRF
HCCCCCCEEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
QCMTHRKDPIYLTTFSGRPPKEEAMMAIALNRIYTPILRQQVSEIVDFFLPMEALSYKAA
EEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCEEEE
IISIDKAYPGQARRAALAFWSALPQFTYTKFVIVVDKDINIRDPRQVVWAISSKVDPTRD
EEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCC
VFILPNTPFDTLDFASEKIGLGGRMGIDATTKIPPETDHEWGAPLESDADVAAMVERRWA
EEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
EYGLADLQLGEVDPNLFGYDMK
HCCCCEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
ARDLRGFIKILEERGQLQRISALVDPDLEIAEISNRMLQKGGPGLLFENVKGASFPVAV
CCHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCEEE
NLMGTVERICWAMNMQHPQELETLGKKLSMLQQPKPPKKISQAIDFGKVLFDVLKAKPGR
EHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC
DFFPACQQVVVQGDDVDLNTLPLIRPYPSDAGKIITLGLVITKDCETGTPNVGVYRLQLQ
CHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEE
SKNTMTVHWLSVRGGARHLRKAAERGKKLEIAIALGVDPLIIMAAATPIPVDLSEWLFAG
CCCEEEEEEEEECCCHHHHHHHHHCCCEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHH
LYGGSGVQLAKCKTVDLEVPADSEFVLEGTITPGEILPDGPFGDHMGYYGGVEDSPLIRF
HCCCCCCEEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
QCMTHRKDPIYLTTFSGRPPKEEAMMAIALNRIYTPILRQQVSEIVDFFLPMEALSYKAA
EEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCEEEE
IISIDKAYPGQARRAALAFWSALPQFTYTKFVIVVDKDINIRDPRQVVWAISSKVDPTRD
EEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCC
VFILPNTPFDTLDFASEKIGLGGRMGIDATTKIPPETDHEWGAPLESDADVAAMVERRWA
EEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
EYGLADLQLGEVDPNLFGYDMK
HCCCCEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]