Definition | Nostoc sp. PCC 7120, complete genome. |
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Accession | NC_003272 |
Length | 6,413,771 |
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The map label for this gene is 17228543
Identifier: 17228543
GI number: 17228543
Start: 1219657
End: 1219854
Strand: Direct
Name: 17228543
Synonym: asr1048
Alternate gene names: NA
Gene position: 1219657-1219854 (Clockwise)
Preceding gene: 17228540
Following gene: 17228544
Centisome position: 19.02
GC content: 38.89
Gene sequence:
>198_bases ATGAACTTACTGAGAATTAGAATCCATCACTTAATTGAGCAGTTAAGCGATGAAGAACTGGAAAACGTTTGGCTGGATAT GCACGCTTTGCATTGTGACTTTTATATGTTAAAGGCCATACAACAAGTTAAGCGATCGCAGCAACCGTGGGATATCTTAA CTCAGGAAGAAGCAATACGGATGTTGATGTTTGTTTAG
Upstream 100 bases:
>100_bases AGTTCCCGACATTCTATCTCGACGCGACTGACTTATTGCCGTTCGCCCTGGGTCATTTTTGGGAACAATACCTTAGTGTT TTGGGTAATGCCAAAAATGT
Downstream 100 bases:
>100_bases CGGGGACTGGGGAGTGGGTACTGGGGAGTGGGTACTGGGGAGTGGGGATGAAATTTACCCTCTGCTCTCCCTGCCTTCCC TGCTCCCCCTACCTCCCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 65; Mature: 65
Protein sequence:
>65_residues MNLLRIRIHHLIEQLSDEELENVWLDMHALHCDFYMLKAIQQVKRSQQPWDILTQEEAIRMLMFV
Sequences:
>Translated_65_residues MNLLRIRIHHLIEQLSDEELENVWLDMHALHCDFYMLKAIQQVKRSQQPWDILTQEEAIRMLMFV >Mature_65_residues MNLLRIRIHHLIEQLSDEELENVWLDMHALHCDFYMLKAIQQVKRSQQPWDILTQEEAIRMLMFV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7963; Mature: 7963
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 7.7 %Met (Translated Protein) 9.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 7.7 %Met (Mature Protein) 9.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLLRIRIHHLIEQLSDEELENVWLDMHALHCDFYMLKAIQQVKRSQQPWDILTQEEAIR CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH MLMFV HHHCC >Mature Secondary Structure MNLLRIRIHHLIEQLSDEELENVWLDMHALHCDFYMLKAIQQVKRSQQPWDILTQEEAIR CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH MLMFV HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA