Definition | Nostoc sp. PCC 7120, complete genome. |
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Accession | NC_003272 |
Length | 6,413,771 |
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The map label for this gene is 17228544
Identifier: 17228544
GI number: 17228544
Start: 1219975
End: 1220241
Strand: Direct
Name: 17228544
Synonym: asr1049
Alternate gene names: NA
Gene position: 1219975-1220241 (Clockwise)
Preceding gene: 17228543
Following gene: 17228545
Centisome position: 19.02
GC content: 38.95
Gene sequence:
>267_bases GTGACTTCAGTGAGTCTGGAAATGCGTTACGCCAGGTCGTTTTTAGTAGACCTGAAAAGTTTAGAGCCTGCTGCCTATCA GCGAGTTTATGATTTTATTTTTTCTGATTTTGCCCAAAAGTTGTCCTTGCATGGACTTCCAGAATTGCGACAACTGGATG ATGAAGGTATATTTCATCGGTTTACGATAGATAATTATTTAGTTGGTATAGAAATTAGGGGTGAAATTGTAAAATTTCTC CGGGTCATACCTATGCCGGATGTTTGA
Upstream 100 bases:
>100_bases CTGGGGAGTGGGTACTGGGGAGTGGGGATGAAATTTACCCTCTGCTCTCCCTGCCTTCCCTGCTCCCCCTACCTCCCCTG CCTCCCCCATCTCTCTCAAG
Downstream 100 bases:
>100_bases GGTGAAGAAATTTTCAACACTTAAAACTGTATAAGACTAAGCAGGGATGGCTCTAACCTTACATTACACTTGTTTTTGAA GGACACTTTACTAGAGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MTSVSLEMRYARSFLVDLKSLEPAAYQRVYDFIFSDFAQKLSLHGLPELRQLDDEGIFHRFTIDNYLVGIEIRGEIVKFL RVIPMPDV
Sequences:
>Translated_88_residues MTSVSLEMRYARSFLVDLKSLEPAAYQRVYDFIFSDFAQKLSLHGLPELRQLDDEGIFHRFTIDNYLVGIEIRGEIVKFL RVIPMPDV >Mature_87_residues TSVSLEMRYARSFLVDLKSLEPAAYQRVYDFIFSDFAQKLSLHGLPELRQLDDEGIFHRFTIDNYLVGIEIRGEIVKFLR VIPMPDV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10282; Mature: 10151
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSVSLEMRYARSFLVDLKSLEPAAYQRVYDFIFSDFAQKLSLHGLPELRQLDDEGIFHR CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEE FTIDNYLVGIEIRGEIVKFLRVIPMPDV EEECCEEEEEEEHHHHHHHHHHCCCCCC >Mature Secondary Structure TSVSLEMRYARSFLVDLKSLEPAAYQRVYDFIFSDFAQKLSLHGLPELRQLDDEGIFHR CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEE FTIDNYLVGIEIRGEIVKFLRVIPMPDV EEECCEEEEEEEHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA