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The map label for this gene is yrdA [C]

Identifier: 17228519

GI number: 17228519

Start: 1195024

End: 1195632

Strand: Direct

Name: yrdA [C]

Synonym: alr1024

Alternate gene names: 17228519

Gene position: 1195024-1195632 (Clockwise)

Preceding gene: 17228513

Following gene: 17228520

Centisome position: 18.63

GC content: 46.63

Gene sequence:

>609_bases
GTGATATTCTGGTTTTGCAACCAGCCTCCAAGGATGGAGTTATTCCAGTGTTCCTGGGTACCATATTCATATTCTATCGT
GTCTACCACTTCTTACTGGCCTTCTCCCGATTTTTCTCAAGCCGCCTTCATCGCCGCCAATGCTGTTGTTATGGGTTCAG
TCAAAATAGCAGCAGGAGCAAGCATTTGGTACGGAGCAGTAGTGAGGGCAGATGTGGAAAGCATTGAAATTGGTGAATGC
ACAAATATTCAAGATGGAGCCATTTTACACGGTGATCCTGGTTTGCCAACAGTACTAGAAGACCATGTGACCGTCGGACA
TCGCGCGGTCATTCATTCTGCCCACATTGAACGTGGCAGTTTGATTGGCATTGGCGCAGTAATTTTAGATGGAGTCCGCG
TAGGTGCTGGTAGCATCATAGGTGCTGGATCGATAGTAACTAAAAATATACCCCCGTTATCTCTAGTTGTAGGAGTTCCC
GGTAAAGTTTTACGTCCCATCACCCCAGAAGAAGCCGCAGACCTGATTCAACACGCCGAACGTTACAAAAAGTTAGCATT
AGTCCATGCTGGTAAGGGTAGTGATATTGGCTTTTACCCGCAAGAGTGA

Upstream 100 bases:

>100_bases
GCTCCACCATACTGGGGGAATTGTTCGTTGCTGCAAGTATACGGTATCGCAGCCAGAACAATTTTCACCGTTGTCTTCCT
CAATTTGGAGGTGAGACTCT

Downstream 100 bases:

>100_bases
AGCAGGGGAAGCAGGGGAAGCATGGGAAGCAGGGGGGCAGGGGGAGCAAAGAAGAATAACTATGTCAACGGACAACTGAC
AACGGATAACTGACAACTGA

Product: ferripyochelin binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MIFWFCNQPPRMELFQCSWVPYSYSIVSTTSYWPSPDFSQAAFIAANAVVMGSVKIAAGASIWYGAVVRADVESIEIGEC
TNIQDGAILHGDPGLPTVLEDHVTVGHRAVIHSAHIERGSLIGIGAVILDGVRVGAGSIIGAGSIVTKNIPPLSLVVGVP
GKVLRPITPEEAADLIQHAERYKKLALVHAGKGSDIGFYPQE

Sequences:

>Translated_202_residues
MIFWFCNQPPRMELFQCSWVPYSYSIVSTTSYWPSPDFSQAAFIAANAVVMGSVKIAAGASIWYGAVVRADVESIEIGEC
TNIQDGAILHGDPGLPTVLEDHVTVGHRAVIHSAHIERGSLIGIGAVILDGVRVGAGSIIGAGSIVTKNIPPLSLVVGVP
GKVLRPITPEEAADLIQHAERYKKLALVHAGKGSDIGFYPQE
>Mature_202_residues
MIFWFCNQPPRMELFQCSWVPYSYSIVSTTSYWPSPDFSQAAFIAANAVVMGSVKIAAGASIWYGAVVRADVESIEIGEC
TNIQDGAILHGDPGLPTVLEDHVTVGHRAVIHSAHIERGSLIGIGAVILDGVRVGAGSIIGAGSIVTKNIPPLSLVVGVP
GKVLRPITPEEAADLIQHAERYKKLALVHAGKGSDIGFYPQE

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=168, Percent_Identity=36.9047619047619, Blast_Score=100, Evalue=8e-23,
Organism=Escherichia coli, GI1787667, Length=153, Percent_Identity=32.6797385620915, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI87081681, Length=133, Percent_Identity=33.0827067669173, Blast_Score=74, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001451
- InterPro:   IPR011004 [H]

Pfam domain/function: PF00132 Hexapep [H]

EC number: NA

Molecular weight: Translated: 21458; Mature: 21458

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: PS00101 HEXAPEP_TRANSFERASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFWFCNQPPRMELFQCSWVPYSYSIVSTTSYWPSPDFSQAAFIAANAVVMGSVKIAAGA
CEEEEECCCCCCCEEEEECCCEEEEEEEECCCCCCCCCCCEEEEEECEEEEEEEEEECCC
SIWYGAVVRADVESIEIGECTNIQDGAILHGDPGLPTVLEDHVTVGHRAVIHSAHIERGS
CHHHHEEEECCCCEEECCCCCCCCCCEEEECCCCCCHHHHHCCCCCHHEEEECCCCCCCC
LIGIGAVILDGVRVGAGSIIGAGSIVTKNIPPLSLVVGVPGKVLRPITPEEAADLIQHAE
EEEEHHHHHCCEEECCCCEEECCCEEECCCCCEEEEEECCCHHCCCCCHHHHHHHHHHHH
RYKKLALVHAGKGSDIGFYPQE
HHHHEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MIFWFCNQPPRMELFQCSWVPYSYSIVSTTSYWPSPDFSQAAFIAANAVVMGSVKIAAGA
CEEEEECCCCCCCEEEEECCCEEEEEEEECCCCCCCCCCCEEEEEECEEEEEEEEEECCC
SIWYGAVVRADVESIEIGECTNIQDGAILHGDPGLPTVLEDHVTVGHRAVIHSAHIERGS
CHHHHEEEECCCCEEECCCCCCCCCCEEEECCCCCCHHHHHCCCCCHHEEEECCCCCCCC
LIGIGAVILDGVRVGAGSIIGAGSIVTKNIPPLSLVVGVPGKVLRPITPEEAADLIQHAE
EEEEHHHHHCCEEECCCCEEECCCEEECCCCCEEEEEECCCHHCCCCCHHHHHHHHHHHH
RYKKLALVHAGKGSDIGFYPQE
HHHHEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]