| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17228505
Identifier: 17228505
GI number: 17228505
Start: 1181159
End: 1181539
Strand: Direct
Name: 17228505
Synonym: alr1010
Alternate gene names: NA
Gene position: 1181159-1181539 (Clockwise)
Preceding gene: 17228503
Following gene: 17228508
Centisome position: 18.42
GC content: 42.78
Gene sequence:
>381_bases ATGGCCAGTGTAGAACGCGACGAAACCAGAGAGCATCGCATCGAAACAGAGATTATTGTTGATGCTGAAGATAAAGAAGA AAGAGCAATGGGTTGGTACTACTACCTGGACGATACTTTGGAGTTTCCCTTTATGGGTAAGTGGAAGAAGAAGTCTCGCA AAACCTCGACCATTGAAGAGAAAACCGTTGAGGTATTGGGTATGGCTCCAGATGATGAGTGTTTGAAGGATATGTATGTA GAAGTTGCTGATATCGGCGGTAAGGATGATGATGTATATACTGCCAAGCTTTCGGATATAGAGGCTATTGATGTGGATGA CGACACTCAAGAAGCGATCGCTGATTGGTTATATTGGTTAGCTAGGGGATACAAATTTTAG
Upstream 100 bases:
>100_bases CGATAGCAAATTCAAATACCTACAGACCCCTTAACTTATCGACAGATATTTCTCAACAGGCTACCATATCAAACTGTATA TTAAGCAGGGTCTTTATTTT
Downstream 100 bases:
>100_bases GCTAAATTGCGAATTATTCGGCAAGGATTCCCAACGGCTACAACGTTAGTAGGGATGTCTTTGACAACTACGCTCCCAGC ACCAATCGTGGTATTGTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MASVERDETREHRIETEIIVDAEDKEERAMGWYYYLDDTLEFPFMGKWKKKSRKTSTIEEKTVEVLGMAPDDECLKDMYV EVADIGGKDDDVYTAKLSDIEAIDVDDDTQEAIADWLYWLARGYKF
Sequences:
>Translated_126_residues MASVERDETREHRIETEIIVDAEDKEERAMGWYYYLDDTLEFPFMGKWKKKSRKTSTIEEKTVEVLGMAPDDECLKDMYV EVADIGGKDDDVYTAKLSDIEAIDVDDDTQEAIADWLYWLARGYKF >Mature_125_residues ASVERDETREHRIETEIIVDAEDKEERAMGWYYYLDDTLEFPFMGKWKKKSRKTSTIEEKTVEVLGMAPDDECLKDMYVE VADIGGKDDDVYTAKLSDIEAIDVDDDTQEAIADWLYWLARGYKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14750; Mature: 14619
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASVERDETREHRIETEIIVDAEDKEERAMGWYYYLDDTLEFPFMGKWKKKSRKTSTIEE CCCCCCCHHHHHHCEEEEEEECCCCCCHHEEEEEEECCCCCCCCCCCCHHHCCCCCHHHH KTVEVLGMAPDDECLKDMYVEVADIGGKDDDVYTAKLSDIEAIDVDDDTQEAIADWLYWL HHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEECCCCCHHHHHHHHHHHH ARGYKF HHCCCC >Mature Secondary Structure ASVERDETREHRIETEIIVDAEDKEERAMGWYYYLDDTLEFPFMGKWKKKSRKTSTIEE CCCCCCHHHHHHCEEEEEEECCCCCCHHEEEEEEECCCCCCCCCCCCHHHCCCCCHHHH KTVEVLGMAPDDECLKDMYVEVADIGGKDDDVYTAKLSDIEAIDVDDDTQEAIADWLYWL HHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEECCCCCHHHHHHHHHHHH ARGYKF HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA