| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is dipZ [H]
Identifier: 17228508
GI number: 17228508
Start: 1184093
End: 1185604
Strand: Direct
Name: dipZ [H]
Synonym: alr1013
Alternate gene names: 17228508
Gene position: 1184093-1185604 (Clockwise)
Preceding gene: 17228505
Following gene: 17228509
Centisome position: 18.46
GC content: 41.27
Gene sequence:
>1512_bases ATGATCCCCCGTGTAAGAGCGCCAGAATTACCGCAAAATTATCCTTGGTTGAATACTGAACAACCTTTGTCTATTAAGCA ACTCAATGGTAGAGTTGTAATTTTAGATTTTTGGACTTACTGTTGTATAAACTGTCTCCACGTTCTGCCAGACTTGAAAT ATCTGGAACAAAAATATAAAGATAGCCTGACAGTTATTGGTGTCCATTCTGCCAAATTCGACAACGAACAGGAAACCGAA AACATCCGCCAGGCTATATTGCGTTACGATATCGAACACCCAGTATTAGTAGACAAAGATTTTCGTGTATGGCAAGAGTA TGCTGTACGTGCTTGGCCTACTTTAATGGTTATCGACCCCAAAGGTTATGTAATTGGCTACGTTTCCGGTGAAGGAAATC GAGATAAGTTAGACCAATTAATTACACAAGTCATTCAGGAACATCAAGGCGCAATTAATTTTCAACAACTCAGTCTGACT TTAGAAAAACAGCGTCAACCATTAATTACACCTCTAGCCTTTCCAGGTAAAGTCCTAGCCACCCCATCCGGGTTATTCGT CGCTGACTCTGGACATCACCGCATAGTTGTGAGTGACTTCAACGGCGAAATTCTGCATTTAATCGGTAATGGAAAGTCAG GCTTAACTGATGGTAATTTTCAGGAAGCACAATTTTCTGCACCCCAGGGAATGGCGTTCGATATGGAAAATCAAATTCTC TACCTCGCTGACACGGAAAATCATGCTTTGCGGCGGGTTGATATCAATCAGCAAACGGTAGAAACCATTGCGGGAACAGG TGAACAAAGCCGTAATATTCAACCGCATGGGGGTGTTGGTTTAGAAACTGCTTTAAACTCCCCTTGGGATTTGGTGAACA TTGAAAACAGCTTATACATTGCAATGGCGGGAGTCCATCAAATTTGGCAAATGGATTTAGCAAGCGGTGTGATCAAAACT TATGCTGGTACTGGTGTAGAAGCTTGTCTTGATGCTTCCCTTACAGAATCAGCTTTTGCCCAACCTAGTGGAATCACTAA TAACGAACAAGAATTATACATTGCTGATAGCGAGATCAGTTCCATTCGTGGTGTGGGACTAGTGGAACCTCAGGAAGTCA GAACCGTTTGCGGTAGTGGTGGTTTATTCGGTTTTGGTGATGTCGATGGACAAGGTGAAGATGTCCGTTTACAGCATTGT TTAGGGGTGGAATATTTCCAAAATTATTTGTGGGTAGCAGATACATACAACCACAAAATTAAATCAGTTAGTCCTCATAC TGGTAATTGTCAAACTGTCCTGGGAGATGGTTTGGCTGGGTTACAAAATGGTCAAGGTAAAAACACTCGCTTTTTTGAAC CTTCAGGATTGAGTGCGATAGATTCATATCTGTATATTAGTGATACGAATAATCATGTAATTCGCCGTGTAGATTTGCGT ACTTTGGAAGTGACGACGATGCAATTTAATGGTTTGTGTGCGCCTGATGTTTGTATTCCAAATAACTTTTAA
Upstream 100 bases:
>100_bases TGCATAGCTTGTACTGGCACCTAAAAACTTTATCACCTTCTCTATTCTCTAATTATTCTTTCTCTCTACCATTAATGTCT TCGTAAATCCAACTATATTT
Downstream 100 bases:
>100_bases GTTCGCGCATTAAACGAAGTCATTCTCGCAAGTAGGCGCAAAGTTTTCTCTGTGCCTCTGCGTCTCTGCGTGAGATAAAA AATGATGGGACTATTATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 503; Mature: 503
Protein sequence:
>503_residues MIPRVRAPELPQNYPWLNTEQPLSIKQLNGRVVILDFWTYCCINCLHVLPDLKYLEQKYKDSLTVIGVHSAKFDNEQETE NIRQAILRYDIEHPVLVDKDFRVWQEYAVRAWPTLMVIDPKGYVIGYVSGEGNRDKLDQLITQVIQEHQGAINFQQLSLT LEKQRQPLITPLAFPGKVLATPSGLFVADSGHHRIVVSDFNGEILHLIGNGKSGLTDGNFQEAQFSAPQGMAFDMENQIL YLADTENHALRRVDINQQTVETIAGTGEQSRNIQPHGGVGLETALNSPWDLVNIENSLYIAMAGVHQIWQMDLASGVIKT YAGTGVEACLDASLTESAFAQPSGITNNEQELYIADSEISSIRGVGLVEPQEVRTVCGSGGLFGFGDVDGQGEDVRLQHC LGVEYFQNYLWVADTYNHKIKSVSPHTGNCQTVLGDGLAGLQNGQGKNTRFFEPSGLSAIDSYLYISDTNNHVIRRVDLR TLEVTTMQFNGLCAPDVCIPNNF
Sequences:
>Translated_503_residues MIPRVRAPELPQNYPWLNTEQPLSIKQLNGRVVILDFWTYCCINCLHVLPDLKYLEQKYKDSLTVIGVHSAKFDNEQETE NIRQAILRYDIEHPVLVDKDFRVWQEYAVRAWPTLMVIDPKGYVIGYVSGEGNRDKLDQLITQVIQEHQGAINFQQLSLT LEKQRQPLITPLAFPGKVLATPSGLFVADSGHHRIVVSDFNGEILHLIGNGKSGLTDGNFQEAQFSAPQGMAFDMENQIL YLADTENHALRRVDINQQTVETIAGTGEQSRNIQPHGGVGLETALNSPWDLVNIENSLYIAMAGVHQIWQMDLASGVIKT YAGTGVEACLDASLTESAFAQPSGITNNEQELYIADSEISSIRGVGLVEPQEVRTVCGSGGLFGFGDVDGQGEDVRLQHC LGVEYFQNYLWVADTYNHKIKSVSPHTGNCQTVLGDGLAGLQNGQGKNTRFFEPSGLSAIDSYLYISDTNNHVIRRVDLR TLEVTTMQFNGLCAPDVCIPNNF >Mature_503_residues MIPRVRAPELPQNYPWLNTEQPLSIKQLNGRVVILDFWTYCCINCLHVLPDLKYLEQKYKDSLTVIGVHSAKFDNEQETE NIRQAILRYDIEHPVLVDKDFRVWQEYAVRAWPTLMVIDPKGYVIGYVSGEGNRDKLDQLITQVIQEHQGAINFQQLSLT LEKQRQPLITPLAFPGKVLATPSGLFVADSGHHRIVVSDFNGEILHLIGNGKSGLTDGNFQEAQFSAPQGMAFDMENQIL YLADTENHALRRVDINQQTVETIAGTGEQSRNIQPHGGVGLETALNSPWDLVNIENSLYIAMAGVHQIWQMDLASGVIKT YAGTGVEACLDASLTESAFAQPSGITNNEQELYIADSEISSIRGVGLVEPQEVRTVCGSGGLFGFGDVDGQGEDVRLQHC LGVEYFQNYLWVADTYNHKIKSVSPHTGNCQTVLGDGLAGLQNGQGKNTRFFEPSGLSAIDSYLYISDTNNHVIRRVDLR TLEVTTMQFNGLCAPDVCIPNNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI42476013, Length=522, Percent_Identity=41.5708812260536, Blast_Score=373, Evalue=1e-103, Organism=Drosophila melanogaster, GI116007528, Length=517, Percent_Identity=38.1044487427466, Blast_Score=317, Evalue=1e-86,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR003834 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA; PF02683 DsbD [H]
EC number: NA
Molecular weight: Translated: 55826; Mature: 55826
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPRVRAPELPQNYPWLNTEQPLSIKQLNGRVVILDFWTYCCINCLHVLPDLKYLEQKYK CCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEEEEHHHHHHHHHHHHCCCHHHHHHHHC DSLTVIGVHSAKFDNEQETENIRQAILRYDIEHPVLVDKDFRVWQEYAVRAWPTLMVIDP CCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHCCEEEEECC KGYVIGYVSGEGNRDKLDQLITQVIQEHQGAINFQQLSLTLEKQRQPLITPLAFPGKVLA CCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEHEEEEHHHCCCCCCCCCCCCCEEEE TPSGLFVADSGHHRIVVSDFNGEILHLIGNGKSGLTDGNFQEAQFSAPQGMAFDMENQIL CCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCHHCCCCCCCCEEECCCCEE YLADTENHALRRVDINQQTVETIAGTGEQSRNIQPHGGVGLETALNSPWDLVNIENSLYI EEEECCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCEEEECCCEEE AMAGVHQIWQMDLASGVIKTYAGTGVEACLDASLTESAFAQPSGITNNEQELYIADSEIS EEHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHCCCCCCCCCCCCEEEEECCCHH SIRGVGLVEPQEVRTVCGSGGLFGFGDVDGQGEDVRLQHCLGVEYFQNYLWVADTYNHKI HHCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCEEHHHHCCHHHHHCEEEEEECCCCCE KSVSPHTGNCQTVLGDGLAGLQNGQGKNTRFFEPSGLSAIDSYLYISDTNNHVIRRVDLR EECCCCCCCCCEEECCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECCCCCEEEEEEEE TLEVTTMQFNGLCAPDVCIPNNF EEEEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure MIPRVRAPELPQNYPWLNTEQPLSIKQLNGRVVILDFWTYCCINCLHVLPDLKYLEQKYK CCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEEEEHHHHHHHHHHHHCCCHHHHHHHHC DSLTVIGVHSAKFDNEQETENIRQAILRYDIEHPVLVDKDFRVWQEYAVRAWPTLMVIDP CCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHCCEEEEECC KGYVIGYVSGEGNRDKLDQLITQVIQEHQGAINFQQLSLTLEKQRQPLITPLAFPGKVLA CCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEHEEEEHHHCCCCCCCCCCCCCEEEE TPSGLFVADSGHHRIVVSDFNGEILHLIGNGKSGLTDGNFQEAQFSAPQGMAFDMENQIL CCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCHHCCCCCCCCEEECCCCEE YLADTENHALRRVDINQQTVETIAGTGEQSRNIQPHGGVGLETALNSPWDLVNIENSLYI EEEECCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCEEEECCCEEE AMAGVHQIWQMDLASGVIKTYAGTGVEACLDASLTESAFAQPSGITNNEQELYIADSEIS EEHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHCCCCCCCCCCCCEEEEECCCHH SIRGVGLVEPQEVRTVCGSGGLFGFGDVDGQGEDVRLQHCLGVEYFQNYLWVADTYNHKI HHCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCEEHHHHCCHHHHHCEEEEEECCCCCE KSVSPHTGNCQTVLGDGLAGLQNGQGKNTRFFEPSGLSAIDSYLYISDTNNHVIRRVDLR EECCCCCCCCCEEECCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECCCCCEEEEEEEE TLEVTTMQFNGLCAPDVCIPNNF EEEEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]