Click here to switch to the map view.

The map label for this gene is 17228438

Identifier: 17228438

GI number: 17228438

Start: 1096090

End: 1096650

Strand: Direct

Name: 17228438

Synonym: alr0943

Alternate gene names: NA

Gene position: 1096090-1096650 (Clockwise)

Preceding gene: 17228437

Following gene: 17228439

Centisome position: 17.09

GC content: 46.52

Gene sequence:

>561_bases
GTGAAAAAATTTACTTCTCAGTTCTGGCTCCAAAGACCAATTCATTGGAGCCTAATTTTTGGTTTGGCGAGTTTGCTTGG
CTCTTGTGGTTCTGGTGATATCCCCCTTGGGCCAACTTCCCTCAATAGTCGCTTCGCAGAAGAGCAACCAGCCTTAAGTG
GTAATGGTCGCTTTTTGGCGTTTATTTCTAATAGGAATGGTGTGCATCAGTTACTTGTGTATGATTTACAACAACAAAGT
TTTATTCGGACACCAGGATTAAACCGACCAGAGACAATAACCGAAAGTCCCAGTTTGAGCTACACCGGGCGGTATATTGT
TTACATGACTAGCGACCAAGGTAGACCTGTTGTGGCTCTTTACGATCGCGCCATCCAGCAATCGCAAATCATTACCCCCA
CCTATCGCGGGTGGGTACGAAATCCGGGTATTAGTCCAGATGGACGTTATGTTGTCTTTGAAACCGCGGCCCGTGGACAA
TGGGATATCGAAGTCCTAGACAGGGGGCCAAATATTGAATTAGATATTCCCAATGGGGCTACGGTGAATCCGCAGCAGTA
G

Upstream 100 bases:

>100_bases
GTCAGATGATGATTCAGAGAACTCGACAAATTTTGATGATATCTAAAGCACTCTGGATGGATGTAAGCTTATAGGCGACG
GAAACCAGTAAAGATTTGAG

Downstream 100 bases:

>100_bases
GTGGGAAGTGTTGACCGTTAACTGTTGACTGTTGACTAATAACTAATGACCAAACGTATTTTTATTCCTATATTTGCTTG
TTTAGGATTAAGCGGATGTT

Product: hypothetical protein

Products: NA

Alternate protein names: WD40 Domain Protein Beta Propeller; WD-40-Like Beta Propeller Repeat-Containing Protein; WD40-Like Beta-Propeller Protein; Lipoprotein; WD40-Like Beta Propeller

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MKKFTSQFWLQRPIHWSLIFGLASLLGSCGSGDIPLGPTSLNSRFAEEQPALSGNGRFLAFISNRNGVHQLLVYDLQQQS
FIRTPGLNRPETITESPSLSYTGRYIVYMTSDQGRPVVALYDRAIQQSQIITPTYRGWVRNPGISPDGRYVVFETAARGQ
WDIEVLDRGPNIELDIPNGATVNPQQ

Sequences:

>Translated_186_residues
MKKFTSQFWLQRPIHWSLIFGLASLLGSCGSGDIPLGPTSLNSRFAEEQPALSGNGRFLAFISNRNGVHQLLVYDLQQQS
FIRTPGLNRPETITESPSLSYTGRYIVYMTSDQGRPVVALYDRAIQQSQIITPTYRGWVRNPGISPDGRYVVFETAARGQ
WDIEVLDRGPNIELDIPNGATVNPQQ
>Mature_186_residues
MKKFTSQFWLQRPIHWSLIFGLASLLGSCGSGDIPLGPTSLNSRFAEEQPALSGNGRFLAFISNRNGVHQLLVYDLQQQS
FIRTPGLNRPETITESPSLSYTGRYIVYMTSDQGRPVVALYDRAIQQSQIITPTYRGWVRNPGISPDGRYVVFETAARGQ
WDIEVLDRGPNIELDIPNGATVNPQQ

Specific function: Unknown

COG id: COG0823

COG function: function code U; Periplasmic component of the Tol biopolymer transport system

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20785; Mature: 20785

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFTSQFWLQRPIHWSLIFGLASLLGSCGSGDIPLGPTSLNSRFAEEQPALSGNGRFLA
CCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEE
FISNRNGVHQLLVYDLQQQSFIRTPGLNRPETITESPSLSYTGRYIVYMTSDQGRPVVAL
EEECCCCCEEHEEEHHCHHHEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEE
YDRAIQQSQIITPTYRGWVRNPGISPDGRYVVFETAARGQWDIEVLDRGPNIELDIPNGA
EHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCEEEECCCCC
TVNPQQ
CCCCCC
>Mature Secondary Structure
MKKFTSQFWLQRPIHWSLIFGLASLLGSCGSGDIPLGPTSLNSRFAEEQPALSGNGRFLA
CCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEE
FISNRNGVHQLLVYDLQQQSFIRTPGLNRPETITESPSLSYTGRYIVYMTSDQGRPVVAL
EEECCCCCEEHEEEHHCHHHEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEE
YDRAIQQSQIITPTYRGWVRNPGISPDGRYVVFETAARGQWDIEVLDRGPNIELDIPNGA
EHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCEEEECCCCC
TVNPQQ
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA