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The map label for this gene is 17228439

Identifier: 17228439

GI number: 17228439

Start: 1096696

End: 1097217

Strand: Direct

Name: 17228439

Synonym: alr0944

Alternate gene names: NA

Gene position: 1096696-1097217 (Clockwise)

Preceding gene: 17228438

Following gene: 17228441

Centisome position: 17.1

GC content: 44.64

Gene sequence:

>522_bases
ATGACCAAACGTATTTTTATTCCTATATTTGCTTGTTTAGGATTAAGCGGATGTTTTGGCTATCCTCGGTTGGTAAGTTA
CCCTTTTGATCCAGGGGGAAGGAGTATTAATAGTCTTGCTTCAGAACTTAATCCTCAGAGTTCGGGTAGATATATTGTGT
TTACAAGCGATCGCCGGGGTAGTCAGGATGTGTATATGTTTGATACTCTGACGCGGAATTTGGTGGATTTGCCTGGGCTA
AATGCTTTAGATACCATCGCTTCTCATCCTAGTGTTTCGGCGGATGGTCGTTATGTGGTTTTTGCTGCTAGTCGTCAAGG
ACGCTCGGCTATTTTCCTCTATGACAGAGAAACAAGGCAATCACGCAGTTTGACAAATAATCTACAAGCAGAAGTCCGCA
ACCCCACCATTAGCACTGATGGGAATGCGATCGCTTTTGAGTCTAGCAATAATGGGCAGTGGGATGTTTTAGTCTATAAC
CGTTCTGGGCAACCGGTGAATGTGCCGCAAGATCCGCGATGA

Upstream 100 bases:

>100_bases
GCCAAATATTGAATTAGATATTCCCAATGGGGCTACGGTGAATCCGCAGCAGTAGGTGGGAAGTGTTGACCGTTAACTGT
TGACTGTTGACTAATAACTA

Downstream 100 bases:

>100_bases
TGTGAGGGAGTTGGTGTAGGAGTTTAGGGGAGAAATTTTTGAATTTTGAATTGACTACTCCTCATTCGCTTTTTGTATTG
ATTCAATCAGCGATCGCACT

Product: hypothetical protein

Products: NA

Alternate protein names: WD40 Domain Protein Beta Propeller; WD-40-Like Beta Propeller Repeat-Containing Protein; WD40-Like Beta-Propeller Protein; WD40-Like Beta Propeller; Lipoprotein

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MTKRIFIPIFACLGLSGCFGYPRLVSYPFDPGGRSINSLASELNPQSSGRYIVFTSDRRGSQDVYMFDTLTRNLVDLPGL
NALDTIASHPSVSADGRYVVFAASRQGRSAIFLYDRETRQSRSLTNNLQAEVRNPTISTDGNAIAFESSNNGQWDVLVYN
RSGQPVNVPQDPR

Sequences:

>Translated_173_residues
MTKRIFIPIFACLGLSGCFGYPRLVSYPFDPGGRSINSLASELNPQSSGRYIVFTSDRRGSQDVYMFDTLTRNLVDLPGL
NALDTIASHPSVSADGRYVVFAASRQGRSAIFLYDRETRQSRSLTNNLQAEVRNPTISTDGNAIAFESSNNGQWDVLVYN
RSGQPVNVPQDPR
>Mature_172_residues
TKRIFIPIFACLGLSGCFGYPRLVSYPFDPGGRSINSLASELNPQSSGRYIVFTSDRRGSQDVYMFDTLTRNLVDLPGLN
ALDTIASHPSVSADGRYVVFAASRQGRSAIFLYDRETRQSRSLTNNLQAEVRNPTISTDGNAIAFESSNNGQWDVLVYNR
SGQPVNVPQDPR

Specific function: Unknown

COG id: COG0823

COG function: function code U; Periplasmic component of the Tol biopolymer transport system

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19117; Mature: 18985

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKRIFIPIFACLGLSGCFGYPRLVSYPFDPGGRSINSLASELNPQSSGRYIVFTSDRRG
CCCEEEEHHHHHHCCCCCCCCCHHEECCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCC
SQDVYMFDTLTRNLVDLPGLNALDTIASHPSVSADGRYVVFAASRQGRSAIFLYDRETRQ
CCCEEEEHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEEECCCHH
SRSLTNNLQAEVRNPTISTDGNAIAFESSNNGQWDVLVYNRSGQPVNVPQDPR
HHHHHHCCCEEECCCEECCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
TKRIFIPIFACLGLSGCFGYPRLVSYPFDPGGRSINSLASELNPQSSGRYIVFTSDRRG
CCEEEEHHHHHHCCCCCCCCCHHEECCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCC
SQDVYMFDTLTRNLVDLPGLNALDTIASHPSVSADGRYVVFAASRQGRSAIFLYDRETRQ
CCCEEEEHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEEECCCHH
SRSLTNNLQAEVRNPTISTDGNAIAFESSNNGQWDVLVYNRSGQPVNVPQDPR
HHHHHHCCCEEECCCEECCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA