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The map label for this gene is yhbO [H]

Identifier: 17228388

GI number: 17228388

Start: 1031408

End: 1032502

Strand: Direct

Name: yhbO [H]

Synonym: alr0893

Alternate gene names: 17228388

Gene position: 1031408-1032502 (Clockwise)

Preceding gene: 17228387

Following gene: 17228389

Centisome position: 16.08

GC content: 44.2

Gene sequence:

>1095_bases
ATGACCAACCATAATAATTCTGGGAAGAAGAAAGTAGCTATTCTGATTGAACAAGCCGTAGAAGATGCAGAATTCATTAT
TCCTTGCAACGGTCTAAAACAAGCAGGATTTGAGGTAGTCGTCCTCGGTTCGCGGACGAACGAAAAATATAAGGGAAAAC
GAGGCAGACTTTCTACCCAAGCTGATGGTACTACGACAGAAGCGATCGCCTCTGAATTTGATGCGGTAGTAATTCCTGGT
GGGATGGCTCCCGATAAAATGCGCCGCAACCCCAATACAGTCCGCTTCGTACAAGAGGCGATGCAGCAAGGAAAATTGGT
AGCTGCGGTTTGTCATGGGCCACAAGTCTTAATTGAAAGCGACTTACTCCGAGGTAAACAAGCCACAGGTTTTATTGCTA
TCAGCCGAGACATGATTAATGCTGGTGCTGATTATGTAGATGAGGCGCTAGTTGTTGATGGTAACTTGATTACATCCCGT
GAACCTGGAGATTTGGCGATTTTCACCACAGCTATTTTGAGTCGTCTAGGTTATGGCGGTAAAGATGCAGCCCTACCAGA
TGAAAAAGATAGAAACGCAGAGTGGTGGAAACTGGCTGATGCTTGGGGCGGTTCGACTAAAGGTGATATTGTCAGAGGTT
TGAATACTGCTTTAGGTGGAGAACGTTATTCCCTAGAGGCATTGGAGAAGTATACAGAAAAGGAATCGGACACACAAGCA
AAAGCGCTGTTCCAAGAAATGATCACTAATAAACAGCGTCATATTGAATATCTAGAAACTTATCTGACTAGATTGGGTGA
GAAACCCTCCCTGGGCGCAAATATCGCCAATCAATACGCCAAAGTGAAAACCGCTTTAACTGGTAGCGATGACATACATC
AAATACGCAGTGCTTTAGGTGATTTACAAACAGGCATTGGTGATATTGGTAATCTTTGTGCAATGTACACTGACCCCATA
GCAACCGCTATTTTCAAAGAGATTTACAAAGATTTGGTCAAATACGAACAGCGATTAGTTTCACTATACCGGACGCGTAC
AAACGCTACAGCCCAACCACCTAAGCCAACAACAGGGGCAGCTGTATCGATGTAA

Upstream 100 bases:

>100_bases
TCGCATGATTATGAAGAAATGTTCGGCACGTCACCCACTGGCGAAGTGCCAGCATAATCACCAAGACAAATTTTTAGTTT
ATCGTTAGATAGGAAACAAT

Downstream 100 bases:

>100_bases
AAGAGGGAATAAAAAGTGGGGAGGAGATTCTTTAATTTTGAATTTTGCGAAAAGTTCTGTAGGCAAATGGTGAACTCGGA
GGGGTTTCCCGCCGTAGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 363

Protein sequence:

>364_residues
MTNHNNSGKKKVAILIEQAVEDAEFIIPCNGLKQAGFEVVVLGSRTNEKYKGKRGRLSTQADGTTTEAIASEFDAVVIPG
GMAPDKMRRNPNTVRFVQEAMQQGKLVAAVCHGPQVLIESDLLRGKQATGFIAISRDMINAGADYVDEALVVDGNLITSR
EPGDLAIFTTAILSRLGYGGKDAALPDEKDRNAEWWKLADAWGGSTKGDIVRGLNTALGGERYSLEALEKYTEKESDTQA
KALFQEMITNKQRHIEYLETYLTRLGEKPSLGANIANQYAKVKTALTGSDDIHQIRSALGDLQTGIGDIGNLCAMYTDPI
ATAIFKEIYKDLVKYEQRLVSLYRTRTNATAQPPKPTTGAAVSM

Sequences:

>Translated_364_residues
MTNHNNSGKKKVAILIEQAVEDAEFIIPCNGLKQAGFEVVVLGSRTNEKYKGKRGRLSTQADGTTTEAIASEFDAVVIPG
GMAPDKMRRNPNTVRFVQEAMQQGKLVAAVCHGPQVLIESDLLRGKQATGFIAISRDMINAGADYVDEALVVDGNLITSR
EPGDLAIFTTAILSRLGYGGKDAALPDEKDRNAEWWKLADAWGGSTKGDIVRGLNTALGGERYSLEALEKYTEKESDTQA
KALFQEMITNKQRHIEYLETYLTRLGEKPSLGANIANQYAKVKTALTGSDDIHQIRSALGDLQTGIGDIGNLCAMYTDPI
ATAIFKEIYKDLVKYEQRLVSLYRTRTNATAQPPKPTTGAAVSM
>Mature_363_residues
TNHNNSGKKKVAILIEQAVEDAEFIIPCNGLKQAGFEVVVLGSRTNEKYKGKRGRLSTQADGTTTEAIASEFDAVVIPGG
MAPDKMRRNPNTVRFVQEAMQQGKLVAAVCHGPQVLIESDLLRGKQATGFIAISRDMINAGADYVDEALVVDGNLITSRE
PGDLAIFTTAILSRLGYGGKDAALPDEKDRNAEWWKLADAWGGSTKGDIVRGLNTALGGERYSLEALEKYTEKESDTQAK
ALFQEMITNKQRHIEYLETYLTRLGEKPSLGANIANQYAKVKTALTGSDDIHQIRSALGDLQTGIGDIGNLCAMYTDPIA
TAIFKEIYKDLVKYEQRLVSLYRTRTNATAQPPKPTTGAAVSM

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PfpI endopeptidase domain [H]

Homologues:

Organism=Escherichia coli, GI87082219, Length=169, Percent_Identity=40.8284023668639, Blast_Score=139, Evalue=3e-34,
Organism=Caenorhabditis elegans, GI17558714, Length=168, Percent_Identity=26.1904761904762, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI28571932, Length=169, Percent_Identity=31.9526627218935, Blast_Score=79, Evalue=6e-15,
Organism=Drosophila melanogaster, GI24653499, Length=177, Percent_Identity=30.5084745762712, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006286
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 39620; Mature: 39489

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNHNNSGKKKVAILIEQAVEDAEFIIPCNGLKQAGFEVVVLGSRTNEKYKGKRGRLSTQ
CCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEECCCCHHHCCCCCCCCCC
ADGTTTEAIASEFDAVVIPGGMAPDKMRRNPNTVRFVQEAMQQGKLVAAVCHGPQVLIES
CCCCHHHHHHHCCCEEEECCCCCHHHHCCCCCHHHHHHHHHHCCCEEEEEECCCHHHHHH
DLLRGKQATGFIAISRDMINAGADYVDEALVVDGNLITSREPGDLAIFTTAILSRLGYGG
HHHCCCCCCEEEEEEHHHHHCCHHHHHCEEEECCCEEECCCCCCHHHHHHHHHHHCCCCC
KDAALPDEKDRNAEWWKLADAWGGSTKGDIVRGLNTALGGERYSLEALEKYTEKESDTQA
CCCCCCCCCCCCCHHEEHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHH
KALFQEMITNKQRHIEYLETYLTRLGEKPSLGANIANQYAKVKTALTGSDDIHQIRSALG
HHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
DLQTGIGDIGNLCAMYTDPIATAIFKEIYKDLVKYEQRLVSLYRTRTNATAQPPKPTTGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
AVSM
CCCC
>Mature Secondary Structure 
TNHNNSGKKKVAILIEQAVEDAEFIIPCNGLKQAGFEVVVLGSRTNEKYKGKRGRLSTQ
CCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEECCCCHHHCCCCCCCCCC
ADGTTTEAIASEFDAVVIPGGMAPDKMRRNPNTVRFVQEAMQQGKLVAAVCHGPQVLIES
CCCCHHHHHHHCCCEEEECCCCCHHHHCCCCCHHHHHHHHHHCCCEEEEEECCCHHHHHH
DLLRGKQATGFIAISRDMINAGADYVDEALVVDGNLITSREPGDLAIFTTAILSRLGYGG
HHHCCCCCCEEEEEEHHHHHCCHHHHHCEEEECCCEEECCCCCCHHHHHHHHHHHCCCCC
KDAALPDEKDRNAEWWKLADAWGGSTKGDIVRGLNTALGGERYSLEALEKYTEKESDTQA
CCCCCCCCCCCCCHHEEHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHH
KALFQEMITNKQRHIEYLETYLTRLGEKPSLGANIANQYAKVKTALTGSDDIHQIRSALG
HHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
DLQTGIGDIGNLCAMYTDPIATAIFKEIYKDLVKYEQRLVSLYRTRTNATAQPPKPTTGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
AVSM
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]