| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17228389
Identifier: 17228389
GI number: 17228389
Start: 1032663
End: 1033388
Strand: Direct
Name: 17228389
Synonym: alr0894
Alternate gene names: NA
Gene position: 1032663-1033388 (Clockwise)
Preceding gene: 17228388
Following gene: 17228390
Centisome position: 16.1
GC content: 48.62
Gene sequence:
>726_bases GTGACTTTGACATCAGGAGATAAACAGGGAAATACTCCAGGCCAAGCTAGTGATACAGAGCGTTGGGCTTCTCTCATTGG CGGTGGGGCGTTAGTGTTGCTGGGTTTAAGACAAGCCTCGTTGCGGGGAGTGCTGACGGCTTTAGCTGGTGGCGGTTTAA TCTATCAAGGTGCGACGAAACAAAGCACAATTCAGCAAGCGCAAGAAGCGATAGGGATAAATAAACCCATCAAAGTTGAA AAGACGGTAACAATCAATAAGCCAGCAGATGAGCTATACCGTTATTGGCACAACTTTGAGAATTTGCCCACATTCATGAA GCATCTCAAGTCTGTGAAGGTGTACAACGAAAAACGTTCTCATTGGATAGCCAATGCACCTTTAGGTAACAGTGTGGAAT GGGATGCAGACATTCTAGAAGACCGAGAAAATGAGTTTATTTCTTGGGCCTCTGCGGAAGGCGCAGACGTGGAAAACTCC GGTTTTGTGCGTTTCCAAAAAGCCCCAGGCGATGTCCCAGGACAAGCCGCTTCGCGTCTACGCGGTACTGAAGTGAAAGT GGTATTAGAATACAATCTCCCTGGAGGCGCTTTAGCTGCTGTCGTCGCCAAACTTTTCGGCGAGGAACCAGAACAGCAAA TTGGCGACGAACTACGCCGTTTCAAAATGCTCATGGAGGCCGGAGAAATCGCCACCACCGAGGGACAACCATCGGGAAGA AAATAG
Upstream 100 bases:
>100_bases AGGCAAATGGTGAACTCGGAGGGGTTTCCCGCCGTAGGAAACTTTTCAAGACGAATTTTGAATTGGTATCACTCCCCATA TTGAATTGGAGATATATAGC
Downstream 100 bases:
>100_bases GGAGTGGAAGGATAACAACAACTGTTGACTGACGACTTTTAACAGTCAACTGACAACAGACAACTAACTAAATAACTATG AAAGCAGTCTGCTGGTATGG
Product: hypothetical protein
Products: NA
Alternate protein names: Streptomyces Cyclase/Dehydrase Family; Polyketide Cyclase/Dehydrase; Cyclase
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MTLTSGDKQGNTPGQASDTERWASLIGGGALVLLGLRQASLRGVLTALAGGGLIYQGATKQSTIQQAQEAIGINKPIKVE KTVTINKPADELYRYWHNFENLPTFMKHLKSVKVYNEKRSHWIANAPLGNSVEWDADILEDRENEFISWASAEGADVENS GFVRFQKAPGDVPGQAASRLRGTEVKVVLEYNLPGGALAAVVAKLFGEEPEQQIGDELRRFKMLMEAGEIATTEGQPSGR K
Sequences:
>Translated_241_residues MTLTSGDKQGNTPGQASDTERWASLIGGGALVLLGLRQASLRGVLTALAGGGLIYQGATKQSTIQQAQEAIGINKPIKVE KTVTINKPADELYRYWHNFENLPTFMKHLKSVKVYNEKRSHWIANAPLGNSVEWDADILEDRENEFISWASAEGADVENS GFVRFQKAPGDVPGQAASRLRGTEVKVVLEYNLPGGALAAVVAKLFGEEPEQQIGDELRRFKMLMEAGEIATTEGQPSGR K >Mature_240_residues TLTSGDKQGNTPGQASDTERWASLIGGGALVLLGLRQASLRGVLTALAGGGLIYQGATKQSTIQQAQEAIGINKPIKVEK TVTINKPADELYRYWHNFENLPTFMKHLKSVKVYNEKRSHWIANAPLGNSVEWDADILEDRENEFISWASAEGADVENSG FVRFQKAPGDVPGQAASRLRGTEVKVVLEYNLPGGALAAVVAKLFGEEPEQQIGDELRRFKMLMEAGEIATTEGQPSGRK
Specific function: Unknown
COG id: COG5637
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26209; Mature: 26078
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTSGDKQGNTPGQASDTERWASLIGGGALVLLGLRQASLRGVLTALAGGGLIYQGATK CCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCH QSTIQQAQEAIGINKPIKVEKTVTINKPADELYRYWHNFENLPTFMKHLKSVKVYNEKRS HHHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC HWIANAPLGNSVEWDADILEDRENEFISWASAEGADVENSGFVRFQKAPGDVPGQAASRL CEEECCCCCCCCCCCHHHHHCCCCHHEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHC RGTEVKVVLEYNLPGGALAAVVAKLFGEEPEQQIGDELRRFKMLMEAGEIATTEGQPSGR CCCEEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEECCCCCCCCC K C >Mature Secondary Structure TLTSGDKQGNTPGQASDTERWASLIGGGALVLLGLRQASLRGVLTALAGGGLIYQGATK CCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCH QSTIQQAQEAIGINKPIKVEKTVTINKPADELYRYWHNFENLPTFMKHLKSVKVYNEKRS HHHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC HWIANAPLGNSVEWDADILEDRENEFISWASAEGADVENSGFVRFQKAPGDVPGQAASRL CEEECCCCCCCCCCCHHHHHCCCCHHEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHC RGTEVKVVLEYNLPGGALAAVVAKLFGEEPEQQIGDELRRFKMLMEAGEIATTEGQPSGR CCCEEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEECCCCCCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA