| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is 17228344
Identifier: 17228344
GI number: 17228344
Start: 975416
End: 976951
Strand: Direct
Name: 17228344
Synonym: alr0849
Alternate gene names: NA
Gene position: 975416-976951 (Clockwise)
Preceding gene: 17228342
Following gene: 17228346
Centisome position: 15.21
GC content: 39.97
Gene sequence:
>1536_bases ATGTCATCTGGTTCTTCTGGTCGTTATCAAAGCAGATTATTTAACTTTGTCAACCAGCAATCTCGGCGGTTGACGGAAAA TTGGGGAAGTACCTTGCGGAATTTACAAGTTGCTACTAAGTCGGGTGTGTCAGCACTACTTTATCCTGTGTTGATGTTTT TGCAATCATCTGATTCATCGGTGAAAAGTTTATACACCAAAGAACCAGAATTGCGGAAAAGGTTACAGCCTCATGATACT GACTTATTTTCCCCAACTCCCCTAGCGACCGATAGACCTATTCAGCGCGTATTAGAGTCTGTCCAATATTTATCACCAGA AGAAACCGATATCACGGCTTCCACCACATCCAGATTTGCCAATATTCTGGAGTTATTGCAAGGGAAATTTCTCACCCATC GCCCAAATAAGCCTAAACTTTCACACTCTTTAACTATTTCAGACGCAAAGTTAGCAACTGTTAACCCCTCCCTTCCAGAA AACCCACTCCAACGCCATCTACCAATGGTTAGAGGAGTAGCCTCAGATGTAGTTAATCGTCAGTTGGTACTAGTCAGCAC TGAGAACCAGATTCTAGATATTTTGACACCGCAACAACAAGCAAAATTAACAGACAGAATTCTCAGCGAAGTAGCTGAAT ATTGGCATTCTTGGCAATTAACTGAAGCGCAACAGCAAGCCCATTTACTACCAGAAATTAATCGGATATTAGCAAAGTTG ACAGGCGAAAATATGAGCAAAACGCCTGTTATCACCGAGGGAATCACTAAAAATGTCCTCAACACAGGTAAAATAGTAGC TCTACTAGATGCAGCGATCGCTAAACTAGAACAAACTGCGATTGTACCGACACAACAACGCAGTCTAGAAATAATGCGAG TTGCCCAAACTCAAGTCAATATTTTTCTTTATGGCCAAGAACAGCTAAACTCTAGAAAAGAAATAGTAGCTAATTCCGAG AGTGGAGTTACCCAAAAACAAAATGTTTCGGCTTTAATTGAAGCAGCCCTGAATTACTTCTTTGGTGTACCTAAATATAA AGTACTAAAGTCTAGTTTTTTTGAGCAAAAATTACCTGATAGTTATCAGTCACCACATGAATATTTCACAAACGACCCTT GGCTAGAGTGGGCTGATTTGTATGATGATGTTGAAAATCTTACAGCAAAGATTATGCAATCATCAAGAATCAAATCCAGT CTTCCTCCGCATAAATCGGCTGGTTTATCTGGGCAGAAAAAACAACCTACACCACAACAAAAATCAACCTCTAGTGTGTC ACCAAAGAAAAAACATACATCTAGAAAAATTTCCTCTACAAAACAAATCCCAGCTTATCTTGCCCAACAGCAACCTTATA CCGAAAACCAAGCAGAAGCCCAACCAGATTGGATAGAAACGACAGCGACCGTACTAGGCTATGAAAAGCACCTCTTGGAA TATATTCTGGAATGGTTAGACCGTGCTATTCTCTGGATAGAACAAATATTGACAAATATTTTTTACTTTTTGCAAGGTTT GTTGCGGGGTAAGTGA
Upstream 100 bases:
>100_bases TATGTCTATGCTGAATCCTGTATTCTAAATTTTGAATACATTTATATTGTTGGGCGGGAGTCTCAAAAATCAACAAGGCT CACACTAATTAGTTACTACC
Downstream 100 bases:
>100_bases AACTTAATTACTTAGTGAATTTATGATTTTTTGGTAATTGGTAATGGGTCGTTAATTTCTACTATTAGCTATTACTAATG AGCGATTACTAACCCCCACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 511; Mature: 510
Protein sequence:
>511_residues MSSGSSGRYQSRLFNFVNQQSRRLTENWGSTLRNLQVATKSGVSALLYPVLMFLQSSDSSVKSLYTKEPELRKRLQPHDT DLFSPTPLATDRPIQRVLESVQYLSPEETDITASTTSRFANILELLQGKFLTHRPNKPKLSHSLTISDAKLATVNPSLPE NPLQRHLPMVRGVASDVVNRQLVLVSTENQILDILTPQQQAKLTDRILSEVAEYWHSWQLTEAQQQAHLLPEINRILAKL TGENMSKTPVITEGITKNVLNTGKIVALLDAAIAKLEQTAIVPTQQRSLEIMRVAQTQVNIFLYGQEQLNSRKEIVANSE SGVTQKQNVSALIEAALNYFFGVPKYKVLKSSFFEQKLPDSYQSPHEYFTNDPWLEWADLYDDVENLTAKIMQSSRIKSS LPPHKSAGLSGQKKQPTPQQKSTSSVSPKKKHTSRKISSTKQIPAYLAQQQPYTENQAEAQPDWIETTATVLGYEKHLLE YILEWLDRAILWIEQILTNIFYFLQGLLRGK
Sequences:
>Translated_511_residues MSSGSSGRYQSRLFNFVNQQSRRLTENWGSTLRNLQVATKSGVSALLYPVLMFLQSSDSSVKSLYTKEPELRKRLQPHDT DLFSPTPLATDRPIQRVLESVQYLSPEETDITASTTSRFANILELLQGKFLTHRPNKPKLSHSLTISDAKLATVNPSLPE NPLQRHLPMVRGVASDVVNRQLVLVSTENQILDILTPQQQAKLTDRILSEVAEYWHSWQLTEAQQQAHLLPEINRILAKL TGENMSKTPVITEGITKNVLNTGKIVALLDAAIAKLEQTAIVPTQQRSLEIMRVAQTQVNIFLYGQEQLNSRKEIVANSE SGVTQKQNVSALIEAALNYFFGVPKYKVLKSSFFEQKLPDSYQSPHEYFTNDPWLEWADLYDDVENLTAKIMQSSRIKSS LPPHKSAGLSGQKKQPTPQQKSTSSVSPKKKHTSRKISSTKQIPAYLAQQQPYTENQAEAQPDWIETTATVLGYEKHLLE YILEWLDRAILWIEQILTNIFYFLQGLLRGK >Mature_510_residues SSGSSGRYQSRLFNFVNQQSRRLTENWGSTLRNLQVATKSGVSALLYPVLMFLQSSDSSVKSLYTKEPELRKRLQPHDTD LFSPTPLATDRPIQRVLESVQYLSPEETDITASTTSRFANILELLQGKFLTHRPNKPKLSHSLTISDAKLATVNPSLPEN PLQRHLPMVRGVASDVVNRQLVLVSTENQILDILTPQQQAKLTDRILSEVAEYWHSWQLTEAQQQAHLLPEINRILAKLT GENMSKTPVITEGITKNVLNTGKIVALLDAAIAKLEQTAIVPTQQRSLEIMRVAQTQVNIFLYGQEQLNSRKEIVANSES GVTQKQNVSALIEAALNYFFGVPKYKVLKSSFFEQKLPDSYQSPHEYFTNDPWLEWADLYDDVENLTAKIMQSSRIKSSL PPHKSAGLSGQKKQPTPQQKSTSSVSPKKKHTSRKISSTKQIPAYLAQQQPYTENQAEAQPDWIETTATVLGYEKHLLEY ILEWLDRAILWIEQILTNIFYFLQGLLRGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57812; Mature: 57680
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSGSSGRYQSRLFNFVNQQSRRLTENWGSTLRNLQVATKSGVSALLYPVLMFLQSSDSS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHH VKSLYTKEPELRKRLQPHDTDLFSPTPLATDRPIQRVLESVQYLSPEETDITASTTSRFA HHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHH NILELLQGKFLTHRPNKPKLSHSLTISDAKLATVNPSLPENPLQRHLPMVRGVASDVVNR HHHHHHHCCHHCCCCCCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCC QLVLVSTENQILDILTPQQQAKLTDRILSEVAEYWHSWQLTEAQQQAHLLPEINRILAKL EEEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH TGENMSKTPVITEGITKNVLNTGKIVALLDAAIAKLEQTAIVPTQQRSLEIMRVAQTQVN HCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEE IFLYGQEQLNSRKEIVANSESGVTQKQNVSALIEAALNYFFGVPKYKVLKSSFFEQKLPD EEEECHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC SYQSPHEYFTNDPWLEWADLYDDVENLTAKIMQSSRIKSSLPPHKSAGLSGQKKQPTPQQ CCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC KSTSSVSPKKKHTSRKISSTKQIPAYLAQQQPYTENQAEAQPDWIETTATVLGYEKHLLE CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH YILEWLDRAILWIEQILTNIFYFLQGLLRGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SSGSSGRYQSRLFNFVNQQSRRLTENWGSTLRNLQVATKSGVSALLYPVLMFLQSSDSS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHH VKSLYTKEPELRKRLQPHDTDLFSPTPLATDRPIQRVLESVQYLSPEETDITASTTSRFA HHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHH NILELLQGKFLTHRPNKPKLSHSLTISDAKLATVNPSLPENPLQRHLPMVRGVASDVVNR HHHHHHHCCHHCCCCCCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCC QLVLVSTENQILDILTPQQQAKLTDRILSEVAEYWHSWQLTEAQQQAHLLPEINRILAKL EEEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH TGENMSKTPVITEGITKNVLNTGKIVALLDAAIAKLEQTAIVPTQQRSLEIMRVAQTQVN HCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEE IFLYGQEQLNSRKEIVANSESGVTQKQNVSALIEAALNYFFGVPKYKVLKSSFFEQKLPD EEEECHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC SYQSPHEYFTNDPWLEWADLYDDVENLTAKIMQSSRIKSSLPPHKSAGLSGQKKQPTPQQ CCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC KSTSSVSPKKKHTSRKISSTKQIPAYLAQQQPYTENQAEAQPDWIETTATVLGYEKHLLE CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH YILEWLDRAILWIEQILTNIFYFLQGLLRGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA