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The map label for this gene is ynfM [H]

Identifier: 39546292

GI number: 39546292

Start: 371304

End: 372641

Strand: Direct

Name: ynfM [H]

Synonym: STM0328.s

Alternate gene names: 39546292

Gene position: 371304-372641 (Clockwise)

Preceding gene: 16763707

Following gene: 16763709

Centisome position: 7.64

GC content: 42.53

Gene sequence:

>1338_bases
GTGAACGCTGTCAATTCTGTAAACGTAAAAGATAAATATTGTATACACGGATGTTTGTTGGCAAACAGGCAGATGGCAAT
CAGGATCTTTTACGGAACATTGTGTATGAAAAATAATATTGAAGAGACAATAGGTAAGTACTTGCCTATTTTAATGATAT
TACCTCTGGCGGGTTTGGCAGAGTTAGCTTCTTTATATTCAATCCAGGCTTTATTACCAAAGTTAAGTGAGGTTTATAAT
ATCCCATTGAATCAGGTAGGGATGATTTTATCTGCTGAGGTGGGGTTTCTGGCATTAGCCATGTTATTTAGCGGCACGTT
ATCTGACCGTTTTGGGCGAAAGCCAATCATTTTTTATTCGTTGCTGGCAGGAGGTATTTTAACTCTATTGTGCGCAACTG
CATCATCATGGCCGATGCTGGTGGTATACCGCGCTTTGCTCGGCATTGCAGTAAGTGGTATTACGGCGGCCGTTACAGTC
TATATCAGTGAAGAAGTCTCTCCTGCTTTGGCAGGGATTGTTACTGGATATTTTATTTTTGGCAATTCGCTAGGGAGTAT
GTCTGGTCGTGTGTTTGCAACTTTGATGATGGAGCATGTATCTATAGATACGATTTTCTTTATCTTCGGTGGTGTTCTGA
TTGCTATGGCACTCGCGGTGAAGTTGTTTCTCCCGACATCCCGACAGTTTGTTCCTACACCTTCACTACAGCTTGGTGCA
GTGTTGAAAGGCGGGTTGGAACATTTTAAGAATATCCGCGTATCATTATGTTTTGTCATTGGATTTATTCTTTTCGGCTC
TTTTACATCCATCTTTAATTTTCTGGCGTTTTACCTGCATCGACCGCCTTATGAGCTGAGCTACACCTGGATAGGTTTGA
TTCCAGTTAGCTTCTCATTAACTTTTTTTCTTGCGCCATATGCTGCCCGTGTCGCGTTGAATATTGGGTCGATGAATGCG
CTCAGTATGCTGATCATCTGTATGATGGTCGGTGCATTTCTTACGCTAATCGCCCCTTCTCTGTGGGTTTTCATTTCAGG
TATCGTTTTACTGTCAGTCGCATTTTTCTCTGCTCATTCCACCGTATTAGCCTGGGTCAGTTCACGGAGTCCAAACGCAA
AAGGACAGGCGACATCGTTTTATCTGCTTTGCTACTACTCTGGCGGTGCAGTAATGGGGTATTTAAACGGGTATCTTTTC
TCCTGGCAGGGATGGAATGCTATTGCGGCATCATGTCTGATGATGCTGGGGATAGGATTATTTATCTGCCGGTTTATTTT
CGCAAAATATGAGAAACAACCGCAAATCAAAAAACAGTCAGTTCAGGAGAGTTTCTGA

Upstream 100 bases:

>100_bases
GTTCATAACTTACTACGTTGCCATTACCGCGTCATTCTTAGATGATCTACATTTCATAAAACACTTGATTCCATTTCGTC
TCTATTAAGAAAAATAAAAT

Downstream 100 bases:

>100_bases
TTATAGACACGAAGTGTGTTTTTATACTTTCCATAATGGAATCATCATTTTTTCATTAATGTGTCACTATAGCTAAAAGC
TTAAATTGTGAATATTTGGC

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MNAVNSVNVKDKYCIHGCLLANRQMAIRIFYGTLCMKNNIEETIGKYLPILMILPLAGLAELASLYSIQALLPKLSEVYN
IPLNQVGMILSAEVGFLALAMLFSGTLSDRFGRKPIIFYSLLAGGILTLLCATASSWPMLVVYRALLGIAVSGITAAVTV
YISEEVSPALAGIVTGYFIFGNSLGSMSGRVFATLMMEHVSIDTIFFIFGGVLIAMALAVKLFLPTSRQFVPTPSLQLGA
VLKGGLEHFKNIRVSLCFVIGFILFGSFTSIFNFLAFYLHRPPYELSYTWIGLIPVSFSLTFFLAPYAARVALNIGSMNA
LSMLIICMMVGAFLTLIAPSLWVFISGIVLLSVAFFSAHSTVLAWVSSRSPNAKGQATSFYLLCYYSGGAVMGYLNGYLF
SWQGWNAIAASCLMMLGIGLFICRFIFAKYEKQPQIKKQSVQESF

Sequences:

>Translated_445_residues
MNAVNSVNVKDKYCIHGCLLANRQMAIRIFYGTLCMKNNIEETIGKYLPILMILPLAGLAELASLYSIQALLPKLSEVYN
IPLNQVGMILSAEVGFLALAMLFSGTLSDRFGRKPIIFYSLLAGGILTLLCATASSWPMLVVYRALLGIAVSGITAAVTV
YISEEVSPALAGIVTGYFIFGNSLGSMSGRVFATLMMEHVSIDTIFFIFGGVLIAMALAVKLFLPTSRQFVPTPSLQLGA
VLKGGLEHFKNIRVSLCFVIGFILFGSFTSIFNFLAFYLHRPPYELSYTWIGLIPVSFSLTFFLAPYAARVALNIGSMNA
LSMLIICMMVGAFLTLIAPSLWVFISGIVLLSVAFFSAHSTVLAWVSSRSPNAKGQATSFYLLCYYSGGAVMGYLNGYLF
SWQGWNAIAASCLMMLGIGLFICRFIFAKYEKQPQIKKQSVQESF
>Mature_445_residues
MNAVNSVNVKDKYCIHGCLLANRQMAIRIFYGTLCMKNNIEETIGKYLPILMILPLAGLAELASLYSIQALLPKLSEVYN
IPLNQVGMILSAEVGFLALAMLFSGTLSDRFGRKPIIFYSLLAGGILTLLCATASSWPMLVVYRALLGIAVSGITAAVTV
YISEEVSPALAGIVTGYFIFGNSLGSMSGRVFATLMMEHVSIDTIFFIFGGVLIAMALAVKLFLPTSRQFVPTPSLQLGA
VLKGGLEHFKNIRVSLCFVIGFILFGSFTSIFNFLAFYLHRPPYELSYTWIGLIPVSFSLTFFLAPYAARVALNIGSMNA
LSMLIICMMVGAFLTLIAPSLWVFISGIVLLSVAFFSAHSTVLAWVSSRSPNAKGQATSFYLLCYYSGGAVMGYLNGYLF
SWQGWNAIAASCLMMLGIGLFICRFIFAKYEKQPQIKKQSVQESF

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=383, Percent_Identity=33.6814621409922, Blast_Score=212, Evalue=3e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 48597; Mature: 48597

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAVNSVNVKDKYCIHGCLLANRQMAIRIFYGTLCMKNNIEETIGKYLPILMILPLAGLA
CCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
ELASLYSIQALLPKLSEVYNIPLNQVGMILSAEVGFLALAMLFSGTLSDRFGRKPIIFYS
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCHHHHH
LLAGGILTLLCATASSWPMLVVYRALLGIAVSGITAAVTVYISEEVSPALAGIVTGYFIF
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHH
GNSLGSMSGRVFATLMMEHVSIDTIFFIFGGVLIAMALAVKLFLPTSRQFVPTPSLQLGA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
VLKGGLEHFKNIRVSLCFVIGFILFGSFTSIFNFLAFYLHRPPYELSYTWIGLIPVSFSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHH
TFFLAPYAARVALNIGSMNALSMLIICMMVGAFLTLIAPSLWVFISGIVLLSVAFFSAHS
HHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVLAWVSSRSPNAKGQATSFYLLCYYSGGAVMGYLNGYLFSWQGWNAIAASCLMMLGIGL
HHHHHHHCCCCCCCCCCCEEEEEEEECCCHHEEHHCCEEEEECCHHHHHHHHHHHHHHHH
FICRFIFAKYEKQPQIKKQSVQESF
HHHHHHHHHHCCCCCHHHHHHHCCC
>Mature Secondary Structure
MNAVNSVNVKDKYCIHGCLLANRQMAIRIFYGTLCMKNNIEETIGKYLPILMILPLAGLA
CCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
ELASLYSIQALLPKLSEVYNIPLNQVGMILSAEVGFLALAMLFSGTLSDRFGRKPIIFYS
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCHHHHH
LLAGGILTLLCATASSWPMLVVYRALLGIAVSGITAAVTVYISEEVSPALAGIVTGYFIF
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHH
GNSLGSMSGRVFATLMMEHVSIDTIFFIFGGVLIAMALAVKLFLPTSRQFVPTPSLQLGA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
VLKGGLEHFKNIRVSLCFVIGFILFGSFTSIFNFLAFYLHRPPYELSYTWIGLIPVSFSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHH
TFFLAPYAARVALNIGSMNALSMLIICMMVGAFLTLIAPSLWVFISGIVLLSVAFFSAHS
HHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVLAWVSSRSPNAKGQATSFYLLCYYSGGAVMGYLNGYLFSWQGWNAIAASCLMMLGIGL
HHHHHHHCCCCCCCCCCCEEEEEEEECCCHHEEHHCCEEEEECCHHHHHHHHHHHHHHHH
FICRFIFAKYEKQPQIKKQSVQESF
HHHHHHHHHHCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]