| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is levE [H]
Identifier: 16767055
GI number: 16767055
Start: 3971409
End: 3971894
Strand: Reverse
Name: levE [H]
Synonym: STM3771
Alternate gene names: 16767055
Gene position: 3971894-3971409 (Counterclockwise)
Preceding gene: 16767056
Following gene: 16767054
Centisome position: 81.77
GC content: 51.85
Gene sequence:
>486_bases ATGGCCAATATCGTTTTATGCCGCATCGACAGCCGTCTCATTCATGGACAGGTTGTCACGAAGTGGGTCGGACAATCTCA GGCGAACCGGATAGCCGTTGTGAGTGATGAACTGGACGCCGATCCGTTTATGAAAAATATCTACCTGATGGCGGCGCCGC CAAATATCAAAGTGGATTGCTTCGGCAACCAGAGTTTTGCCGCTGCATGGAAAGAAAATCAGCTTGGCGACGGTAACGTG CTGGTGCTTTTTCCGTCACTGGCGGCGGTGCAGGACGCCATACAACTGGGCTTTGACGTCACCCGCATTCAGGTTGGCGG TCTCGGCGGCGGGCCAAACCGCAAGGCGGTTTTTCAGAATATTACGCTGGATGAAAAAGACGTCGGCATTCTTAACGACC TGAAAAACCGTGGCGTTCAGGTATTTTTCCAGACCATTCCGGAAGATAAGCCGCAGCCGCTCGACGATATCCTGAAAAAA TTCTAA
Upstream 100 bases:
>100_bases ACCGCCTGCGTGGACGAGTTAGTTGAGGCCGGGCGCAGTAGCTGCCTGGATGTGGTCGCCCATGTACGTCAGCTACAACA ATCACTCTAAGGAAAACATC
Downstream 100 bases:
>100_bases CCCTTTAATAGACACAAAATCATTCTGGATGCATCAAGGCGGCAACTGAGTGAATCCCCTGGAGCTTACTAAAGTAAGTG ACTGGGGTGAGCGAAGGCAG
Product: phosphotransferase system enzyme IIB
Products: NA
Alternate protein names: EIIB-Fru; PTS system fructose-specific EIIB component; p18 [H]
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MANIVLCRIDSRLIHGQVVTKWVGQSQANRIAVVSDELDADPFMKNIYLMAAPPNIKVDCFGNQSFAAAWKENQLGDGNV LVLFPSLAAVQDAIQLGFDVTRIQVGGLGGGPNRKAVFQNITLDEKDVGILNDLKNRGVQVFFQTIPEDKPQPLDDILKK F
Sequences:
>Translated_161_residues MANIVLCRIDSRLIHGQVVTKWVGQSQANRIAVVSDELDADPFMKNIYLMAAPPNIKVDCFGNQSFAAAWKENQLGDGNV LVLFPSLAAVQDAIQLGFDVTRIQVGGLGGGPNRKAVFQNITLDEKDVGILNDLKNRGVQVFFQTIPEDKPQPLDDILKK F >Mature_160_residues ANIVLCRIDSRLIHGQVVTKWVGQSQANRIAVVSDELDADPFMKNIYLMAAPPNIKVDCFGNQSFAAAWKENQLGDGNVL VLFPSLAAVQDAIQLGFDVTRIQVGGLGGGPNRKAVFQNITLDEKDVGILNDLKNRGVQVFFQTIPEDKPQPLDDILKKF
Specific function: LevD and levE act as negative regulators of the levanase operon. They may be involved in a PTS-mediated phosphorylation of a regulator [H]
COG id: COG3444
COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-4 domain [H]
Homologues:
Organism=Escherichia coli, GI1788120, Length=158, Percent_Identity=29.746835443038, Blast_Score=91, Evalue=4e-20, Organism=Escherichia coli, GI87082217, Length=164, Percent_Identity=32.9268292682927, Blast_Score=81, Evalue=3e-17, Organism=Escherichia coli, GI1789527, Length=158, Percent_Identity=27.8481012658228, Blast_Score=60, Evalue=7e-11,
Paralogues:
None
Copy number: 220 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 260 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004720 - InterPro: IPR018455 [H]
Pfam domain/function: PF03830 PTSIIB_sorb [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 17679; Mature: 17547
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: PS51101 PTS_EIIB_TYPE_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANIVLCRIDSRLIHGQVVTKWVGQSQANRIAVVSDELDADPFMKNIYLMAAPPNIKVDC CCCEEEEEECCEEHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHEEEEEECCCCEEEEE FGNQSFAAAWKENQLGDGNVLVLFPSLAAVQDAIQLGFDVTRIQVGGLGGGPNRKAVFQN ECCCCEEEEECCCCCCCCCEEEEECCHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEE ITLDEKDVGILNDLKNRGVQVFFQTIPEDKPQPLDDILKKF CCCCCCCCHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHCC >Mature Secondary Structure ANIVLCRIDSRLIHGQVVTKWVGQSQANRIAVVSDELDADPFMKNIYLMAAPPNIKVDC CCEEEEEECCEEHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHEEEEEECCCCEEEEE FGNQSFAAAWKENQLGDGNVLVLFPSLAAVQDAIQLGFDVTRIQVGGLGGGPNRKAVFQN ECCCCEEEEECCCCCCCCCEEEEECCHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEE ITLDEKDVGILNDLKNRGVQVFFQTIPEDKPQPLDDILKKF CCCCCCCCHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2117666; 9141695; 9384377; 9551099 [H]