| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16766353
Identifier: 16766353
GI number: 16766353
Start: 3210788
End: 3211681
Strand: Reverse
Name: 16766353
Synonym: STM3052
Alternate gene names: NA
Gene position: 3211681-3210788 (Counterclockwise)
Preceding gene: 16766354
Following gene: 16766351
Centisome position: 66.12
GC content: 43.4
Gene sequence:
>894_bases ATGAAACGATTTATATTTCTGCCATTAATGACATATTTTCTATTAATGAATGCAATGGCAGCTAACGGAGAAAATAATCC CAGTAATCTATTAGGTGCACCAGTTAATACCGCTATTTCTGGTGGTTCAGTATTGCCGGAAGGAAAGTTATTAACCGCCA TGAATAGCTCATTTCGCGATAAAGATCATCAAATCGAGGGGCATGGAAGTCCGGATGTTTACTCCCAGATATGGTTATTG AAGATTCGTTACGGTTTGACCGACAGACTGGAATTATCAACTGTGGGTTCCTATATCAATAACAAACGAGACAATCTGTC TCCTGAGCACATAGAGGGAATGGGCGACCAATCGGTGGGGGTCAATTATGCTTTAATGAGCCAGCGAAGAGGTGATCCGT TTTGGGTTACGGTAGGTGGGGCAGTATTACTACCCACCGGGCAAGATGGAGATAATCATTTGCCTGGGAATAGCGCCTGG GGAGGAAGAGTAACACTCACTTTAACAAAATTATTTACTCCTAACATTAAAGGGGATATGGGTTTTGTATATCAGGGACC ATTTGAGCGCGGTAACCAGGACGTGAAACGAGGTAACGAATTCCAGTGGAATACCCAGGTGCGGTATATGTTTAGCGATT TACCGCTGGATCTTGGTCTGGAAAGTGCCTACAGCAATAATGCCTCTGGAACGAAAAAACTGTCTAATGGCAGCGTAATT AATAACCATTCTGGAACTACCGAATGGGTTGTTGGTCCGTCATTTAATATTGCCGTCGATTCACTGAAATTATGGTTTGG TGCCGGAGCCTTCTTCCCGGTAATGCAGGAAGCGAAGTCGCCAACCAAAATGGAAGATGTACGCTGGGAATTTAAAATAG GTAAGACCTGGTAA
Upstream 100 bases:
>100_bases ATTCATCAAGTTATTAATTTAAATTATAAATTAAAGATAAGCATAAATAACGTAAATATTTATTAACTTAGCACTTTGTT TTTTATACCTGGAGGGAATA
Downstream 100 bases:
>100_bases GACTCGTTCAAAGTGTTACCCGCCGACTGGCGGGTAACGTGCAGGAGTTAAAGCTTCTCGCCGTTGCTGGCAATCACCTC TTTGTACCAGTTGAAGCTCT
Product: outer membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MKRFIFLPLMTYFLLMNAMAANGENNPSNLLGAPVNTAISGGSVLPEGKLLTAMNSSFRDKDHQIEGHGSPDVYSQIWLL KIRYGLTDRLELSTVGSYINNKRDNLSPEHIEGMGDQSVGVNYALMSQRRGDPFWVTVGGAVLLPTGQDGDNHLPGNSAW GGRVTLTLTKLFTPNIKGDMGFVYQGPFERGNQDVKRGNEFQWNTQVRYMFSDLPLDLGLESAYSNNASGTKKLSNGSVI NNHSGTTEWVVGPSFNIAVDSLKLWFGAGAFFPVMQEAKSPTKMEDVRWEFKIGKTW
Sequences:
>Translated_297_residues MKRFIFLPLMTYFLLMNAMAANGENNPSNLLGAPVNTAISGGSVLPEGKLLTAMNSSFRDKDHQIEGHGSPDVYSQIWLL KIRYGLTDRLELSTVGSYINNKRDNLSPEHIEGMGDQSVGVNYALMSQRRGDPFWVTVGGAVLLPTGQDGDNHLPGNSAW GGRVTLTLTKLFTPNIKGDMGFVYQGPFERGNQDVKRGNEFQWNTQVRYMFSDLPLDLGLESAYSNNASGTKKLSNGSVI NNHSGTTEWVVGPSFNIAVDSLKLWFGAGAFFPVMQEAKSPTKMEDVRWEFKIGKTW >Mature_297_residues MKRFIFLPLMTYFLLMNAMAANGENNPSNLLGAPVNTAISGGSVLPEGKLLTAMNSSFRDKDHQIEGHGSPDVYSQIWLL KIRYGLTDRLELSTVGSYINNKRDNLSPEHIEGMGDQSVGVNYALMSQRRGDPFWVTVGGAVLLPTGQDGDNHLPGNSAW GGRVTLTLTKLFTPNIKGDMGFVYQGPFERGNQDVKRGNEFQWNTQVRYMFSDLPLDLGLESAYSNNASGTKKLSNGSVI NNHSGTTEWVVGPSFNIAVDSLKLWFGAGAFFPVMQEAKSPTKMEDVRWEFKIGKTW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32794; Mature: 32794
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFIFLPLMTYFLLMNAMAANGENNPSNLLGAPVNTAISGGSVLPEGKLLTAMNSSFRD CCEEEEHHHHHHHHHHHHHHCCCCCCCHHEECCCCHHCCCCCCCCCCCCEEEECCCCCCC KDHQIEGHGSPDVYSQIWLLKIRYGLTDRLELSTVGSYINNKRDNLSPEHIEGMGDQSVG CCCEECCCCCCHHHHHEEEEEEECCCCCCEEHHHHHHHHCCCCCCCCHHHHHCCCCCCCC VNYALMSQRRGDPFWVTVGGAVLLPTGQDGDNHLPGNSAWGGRVTLTLTKLFTPNIKGDM CEEEEECCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCC GFVYQGPFERGNQDVKRGNEFQWNTQVRYMFSDLPLDLGLESAYSNNASGTKKLSNGSVI CEEEECCHHCCCHHHHCCCCEEECCEEEEEEECCCCCCCCHHHCCCCCCCCEECCCCCEE NNHSGTTEWVVGPSFNIAVDSLKLWFGAGAFFPVMQEAKSPTKMEDVRWEFKIGKTW ECCCCCEEEEECCCCEEEEEEEEEECCCCCHHHHHHHCCCCCCHHHEEEEEEECCCC >Mature Secondary Structure MKRFIFLPLMTYFLLMNAMAANGENNPSNLLGAPVNTAISGGSVLPEGKLLTAMNSSFRD CCEEEEHHHHHHHHHHHHHHCCCCCCCHHEECCCCHHCCCCCCCCCCCCEEEECCCCCCC KDHQIEGHGSPDVYSQIWLLKIRYGLTDRLELSTVGSYINNKRDNLSPEHIEGMGDQSVG CCCEECCCCCCHHHHHEEEEEEECCCCCCEEHHHHHHHHCCCCCCCCHHHHHCCCCCCCC VNYALMSQRRGDPFWVTVGGAVLLPTGQDGDNHLPGNSAWGGRVTLTLTKLFTPNIKGDM CEEEEECCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCC GFVYQGPFERGNQDVKRGNEFQWNTQVRYMFSDLPLDLGLESAYSNNASGTKKLSNGSVI CEEEECCHHCCCHHHHCCCCEEECCEEEEEEECCCCCCCCHHHCCCCCCCCEECCCCCEE NNHSGTTEWVVGPSFNIAVDSLKLWFGAGAFFPVMQEAKSPTKMEDVRWEFKIGKTW ECCCCCEEEEECCCCEEEEEEEEEECCCCCHHHHHHHCCCCCCHHHEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA