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The map label for this gene is yqfB

Identifier: 16766351

GI number: 16766351

Start: 3208837

End: 3209148

Strand: Reverse

Name: yqfB

Synonym: STM3050

Alternate gene names: 16766351

Gene position: 3209148-3208837 (Counterclockwise)

Preceding gene: 16766353

Following gene: 16766350

Centisome position: 66.07

GC content: 45.19

Gene sequence:

>312_bases
ATGCAGCCAAACGACATTACTTTCTTTCAACGTTTCCAGAATGACATTCTGGCAGGGCGTAAAACCATCACTATTCGTGA
TGCCTCCGAGTCCCACTTTAAAGCAGGCGATGTGCTACGCGTGGGGCGGTTCGAAGATGATGGCTATTTTTGCACAATCG
AAGTGACAGGAACGTCAACTGTGACGCTGGATACGCTGAACGAAAAACATGCGCAACAGGAAAATATGTCGCTTGATGAG
CTGAAACGGGTCATTGCTGAAATCTATCCCAACCAGACGCAATTTTATGTGATTGATTTTAAATGCCTTTGA

Upstream 100 bases:

>100_bases
TAAAGCGTACGCAAAATTCCAGGATGCTCGCGTGTCGGAGCAAGAACACATTCAGATCGTAACATCCACTTCAAGGGGCC
ATATTCAGGGGGATAACCAC

Downstream 100 bases:

>100_bases
TAAATATGAACGCGTGTTAGTTGAGTTTTTGTAATTAACTTATTGAATAATAAACAAAATTTAATTTTGCGAATTTATTT
TAGCTAACATGTGTTCACTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MQPNDITFFQRFQNDILAGRKTITIRDASESHFKAGDVLRVGRFEDDGYFCTIEVTGTSTVTLDTLNEKHAQQENMSLDE
LKRVIAEIYPNQTQFYVIDFKCL

Sequences:

>Translated_103_residues
MQPNDITFFQRFQNDILAGRKTITIRDASESHFKAGDVLRVGRFEDDGYFCTIEVTGTSTVTLDTLNEKHAQQENMSLDE
LKRVIAEIYPNQTQFYVIDFKCL
>Mature_103_residues
MQPNDITFFQRFQNDILAGRKTITIRDASESHFKAGDVLRVGRFEDDGYFCTIEVTGTSTVTLDTLNEKHAQQENMSLDE
LKRVIAEIYPNQTQFYVIDFKCL

Specific function: Unknown

COG id: COG3097

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0267 family

Homologues:

Organism=Escherichia coli, GI1789267, Length=103, Percent_Identity=88.3495145631068, Blast_Score=193, Evalue=2e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQFB_SALA4 (B5F5H4)

Other databases:

- EMBL:   CP001138
- RefSeq:   YP_002147963.1
- GeneID:   6796781
- GenomeReviews:   CP001138_GR
- KEGG:   sea:SeAg_B3207
- HOGENOM:   HBG296598
- OMA:   RDEAESH
- ProtClustDB:   PRK04980
- HAMAP:   MF_00684
- InterPro:   IPR007374
- InterPro:   IPR015947
- InterPro:   IPR008314
- PIRSF:   PIRSF029143

Pfam domain/function: PF04266 ASCH; SSF88697 PUA-like

EC number: NA

Molecular weight: Translated: 11900; Mature: 11900

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPNDITFFQRFQNDILAGRKTITIRDASESHFKAGDVLRVGRFEDDGYFCTIEVTGTST
CCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEECEECCCCEEEEEEECCCCE
VTLDTLNEKHAQQENMSLDELKRVIAEIYPNQTQFYVIDFKCL
EEEECCCCHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEEEEC
>Mature Secondary Structure
MQPNDITFFQRFQNDILAGRKTITIRDASESHFKAGDVLRVGRFEDDGYFCTIEVTGTST
CCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEECEECCCCEEEEEEECCCCE
VTLDTLNEKHAQQENMSLDELKRVIAEIYPNQTQFYVIDFKCL
EEEECCCCHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA