Click here to switch to the map view.

The map label for this gene is 16766248

Identifier: 16766248

GI number: 16766248

Start: 3081915

End: 3082475

Strand: Reverse

Name: 16766248

Synonym: STM2942

Alternate gene names: NA

Gene position: 3082475-3081915 (Counterclockwise)

Preceding gene: 16766249

Following gene: 16766247

Centisome position: 63.46

GC content: 48.31

Gene sequence:

>561_bases
ATGAGTGTTGTGACGAAAGATGATAAAGCCACTTTGCGTCAGTGGCATGAGGAACTACAAGAAAAACGTGGATTACGTGC
CAGCTTACGACGTAGTAAAACGGTGAATGATGCCTGTTTGGCTGAGGGGCTTCATTCATTGTTAATGCAAACACATTCTT
TATGGAAAAACAAAGCACCCTGGAATGTTACTGCATTGGCAATCACAGCGGCACTGGCTGCACATATCAAATTTATTGAT
GAGCAAAAGAGTTTTGCTGCGCAGCTTGGACAGAAGAAAGGTGGCGACACTCCGGTGATGTCAAAATTACGCTTCTCCCA
CCTATTAGCGGTAAAAACGCCGGATGAACTGCTGCGCCAGTTACGGCGTGCGGTGAAGCTGTTAGATGGTTCGGTCAACC
TGTTTTCTCTTGCAGACGATATTTTCTGCTGGTGCCAGGAGCAGAATGACTTGCTGAACCACCATCGCCGCCAGCAGCGG
CCAACCGAATTTCTTCGTATCCGCTGGGCGCTGGAATACTACCAGGCCGGCGATGGCGATACCGATAACGAACAAGATTA
A

Upstream 100 bases:

>100_bases
ATCTGGAACGCATCATGACCGCGCGCAAGAAATATTTTACGACATCGGCGGAAAAACAAAGTGCAAAAGCCGCCAAAGCA
AAGAAACAGGAGGCTGCTGA

Downstream 100 bases:

>100_bases
CAGGGATATCTTTATGACAACGTTTATTCAGCTCCATTTACTGACCGCTTACCCCGCCGCTAACCTGAACCGTGATGATA
CCGGTGCGCCAAAAACCGTG

Product: transposase

Products: NA

Alternate protein names: CRISPR-Associated Cse2 Family Protein; Cse2 Family CRISPR-Associated Protein; Transposase; CRISPR-Associated Protein

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MSVVTKDDKATLRQWHEELQEKRGLRASLRRSKTVNDACLAEGLHSLLMQTHSLWKNKAPWNVTALAITAALAAHIKFID
EQKSFAAQLGQKKGGDTPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQR
PTEFLRIRWALEYYQAGDGDTDNEQD

Sequences:

>Translated_186_residues
MSVVTKDDKATLRQWHEELQEKRGLRASLRRSKTVNDACLAEGLHSLLMQTHSLWKNKAPWNVTALAITAALAAHIKFID
EQKSFAAQLGQKKGGDTPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQR
PTEFLRIRWALEYYQAGDGDTDNEQD
>Mature_185_residues
SVVTKDDKATLRQWHEELQEKRGLRASLRRSKTVNDACLAEGLHSLLMQTHSLWKNKAPWNVTALAITAALAAHIKFIDE
QKSFAAQLGQKKGGDTPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRP
TEFLRIRWALEYYQAGDGDTDNEQD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21349; Mature: 21217

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVVTKDDKATLRQWHEELQEKRGLRASLRRSKTVNDACLAEGLHSLLMQTHSLWKNKAP
CCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC
WNVTALAITAALAAHIKFIDEQKSFAAQLGQKKGGDTPVMSKLRFSHLLAVKTPDELLRQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEECCHHHHHHH
LRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDGD
HHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC
TDNEQD
CCCCCC
>Mature Secondary Structure 
SVVTKDDKATLRQWHEELQEKRGLRASLRRSKTVNDACLAEGLHSLLMQTHSLWKNKAP
CCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC
WNVTALAITAALAAHIKFIDEQKSFAAQLGQKKGGDTPVMSKLRFSHLLAVKTPDELLRQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEECCHHHHHHH
LRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDGD
HHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC
TDNEQD
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA